Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5272

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
6,064,878	-				-0.6
6,064,881	+				-0.6
6,064,881	+				-0.6
6,064,881	+				-0.6
6,064,881	+				-0.6
6,064,882	-				-1.1
6,064,882	-				+1.0
6,064,882	-				-0.6
6,064,914	+				-0.6
6,064,914	+				+0.4
6,064,934	+				+0.4
6,064,934	+				-0.6
6,064,934	+				-0.9
6,064,935	-				+0.4
6,064,935	-				-1.1
6,064,935	-				+0.4
6,065,390	-		Pf6N2E2_5270	0.73	+0.4
6,065,448	-				-0.3
6,065,448	-				-1.0
6,065,465	+				-1.3
6,065,466	-				+0.4
6,065,466	-				-0.6
6,065,535	-		Pf6N2E2_5271	0.21	-0.6
6,065,555	+		Pf6N2E2_5271	0.28	-0.6
6,065,567	+		Pf6N2E2_5271	0.32	-0.6
6,065,631	-		Pf6N2E2_5271	0.53	-0.9
6,065,631	-		Pf6N2E2_5271	0.53	+0.4
6,065,631	-		Pf6N2E2_5271	0.53	-2.1
6,065,847	+				-0.7
6,065,870	+				+0.4
6,065,877	+				+0.4
6,066,071	+		Pf6N2E2_5272	0.53	+0.4
6,066,103	+		Pf6N2E2_5272	0.61	-1.9
6,066,103	+		Pf6N2E2_5272	0.61	-0.6
6,066,122	+		Pf6N2E2_5272	0.66	-2.1
6,066,122	+		Pf6N2E2_5272	0.66	+0.4
6,066,123	-		Pf6N2E2_5272	0.67	-0.9
6,066,251	+				-0.9
6,066,251	+				+0.4
6,066,251	+				-0.7
6,066,252	-				-1.3
6,066,252	-				+0.4
6,066,252	-				+0.4
6,066,252	-				+0.4
6,066,252	-				+0.4
6,066,540	+		Pf6N2E2_5273	0.52	+0.4
6,066,540	+		Pf6N2E2_5273	0.52	-0.6
6,066,540	+		Pf6N2E2_5273	0.52	+0.4
6,066,540	+		Pf6N2E2_5273	0.52	-1.1
6,066,540	+		Pf6N2E2_5273	0.52	+0.4
6,066,540	+		Pf6N2E2_5273	0.52	+0.4
6,066,540	+		Pf6N2E2_5273	0.52	+0.4
6,066,541	-		Pf6N2E2_5273	0.52	+0.4
6,066,541	-		Pf6N2E2_5273	0.52	-1.3
6,066,541	-		Pf6N2E2_5273	0.52	+0.4
6,066,541	-		Pf6N2E2_5273	0.52	+0.4
6,066,542	+		Pf6N2E2_5273	0.52	-1.6
6,066,542	+		Pf6N2E2_5273	0.52	-1.6
6,066,542	+		Pf6N2E2_5273	0.52	+0.4
6,066,542	+		Pf6N2E2_5273	0.52	+0.4
6,066,542	+		Pf6N2E2_5273	0.52	-0.6
6,066,543	-		Pf6N2E2_5273	0.52	+0.4
6,066,543	-		Pf6N2E2_5273	0.52	+0.4
6,066,543	-		Pf6N2E2_5273	0.52	+0.4
6,066,543	-		Pf6N2E2_5273	0.52	-1.0
6,066,543	-		Pf6N2E2_5273	0.52	-1.1
6,066,543	-		Pf6N2E2_5273	0.52	+0.4
6,066,543	-		Pf6N2E2_5273	0.52	-0.6
6,066,597	-		Pf6N2E2_5273	0.62	+0.4
6,066,597	-		Pf6N2E2_5273	0.62	+0.4
6,066,684	-		Pf6N2E2_5273	0.77	+0.4
6,066,684	-		Pf6N2E2_5273	0.77	+0.4
6,066,698	+		Pf6N2E2_5273	0.80	-1.1
6,066,698	+		Pf6N2E2_5273	0.80	-1.6
6,066,698	+		Pf6N2E2_5273	0.80	-0.7
6,066,699	-		Pf6N2E2_5273	0.80	-0.6
6,066,699	-		Pf6N2E2_5273	0.80	+0.4
6,066,699	-		Pf6N2E2_5273	0.80	-1.4
6,066,786	-				-0.6
6,066,832	+				-1.6
6,066,832	+				+0.4
6,066,832	+				+0.4
6,066,833	-				+0.4
6,066,833	-				-1.1
6,066,833	-				-1.1
6,066,833	-				-1.1
6,066,880	+				-0.6
6,066,880	+				-1.1
6,066,880	+				-0.5
6,066,880	+				+0.4
6,066,880	+				-0.5
6,066,880	+				+0.4
6,066,880	+				+0.4
6,066,881	-				+0.4
6,066,881	-				+0.4
6,066,881	-				-2.6
6,066,881	-				+0.4
6,066,899	-				-0.6
6,066,899	-				-0.6
6,066,913	+		Pf6N2E2_5274	0.12	-0.6
6,066,913	+		Pf6N2E2_5274	0.12	+0.4
6,066,913	+		Pf6N2E2_5274	0.12	-1.6
6,066,913	+		Pf6N2E2_5274	0.12	+0.4
6,066,914	-		Pf6N2E2_5274	0.12	+0.4
6,067,002	+		Pf6N2E2_5274	0.24	+0.4
6,067,002	+		Pf6N2E2_5274	0.24	-0.7
6,067,003	-		Pf6N2E2_5274	0.24	-0.1
6,067,003	-		Pf6N2E2_5274	0.24	+0.4
6,067,003	-		Pf6N2E2_5274	0.24	-0.6
6,067,100	-		Pf6N2E2_5274	0.38	-1.6
6,067,180	-		Pf6N2E2_5274	0.49	+0.4
6,067,180	-		Pf6N2E2_5274	0.49	-1.1
6,067,180	-		Pf6N2E2_5274	0.49	+0.4
6,067,208	-		Pf6N2E2_5274	0.53	-0.6
6,067,208	-		Pf6N2E2_5274	0.53	-1.1