Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5023

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
5,788,752	-				+0.4
5,788,752	-				-0.6
5,789,010	-		Pf6N2E2_5023	0.41	-0.2
5,789,010	-		Pf6N2E2_5023	0.41	-0.6
5,789,010	-		Pf6N2E2_5023	0.41	+0.4
5,789,309	-		Pf6N2E2_5023	0.89	-1.2
5,789,309	-		Pf6N2E2_5023	0.89	-1.6
5,789,309	-		Pf6N2E2_5023	0.89	-1.4
5,789,309	-		Pf6N2E2_5023	0.89	-2.6
5,789,313	-		Pf6N2E2_5023	0.90	+0.4
5,789,313	-		Pf6N2E2_5023	0.90	+0.4
5,789,313	-		Pf6N2E2_5023	0.90	-0.6
5,789,313	-		Pf6N2E2_5023	0.90	-0.6
5,789,358	-				-0.3
5,789,369	-				-0.9
5,789,480	-		Pf6N2E2_5024	0.12	+0.4
5,789,480	-		Pf6N2E2_5024	0.12	+0.4
5,789,573	-		Pf6N2E2_5024	0.25	-0.8
5,789,598	-		Pf6N2E2_5024	0.28	+0.4
5,790,111	-				-0.6
5,790,182	-				+0.4
5,790,182	-				+0.0
5,790,182	-				-2.2
5,790,182	-				-0.6
5,790,182	-				-1.6
5,790,182	-				+0.6
5,790,186	-				-1.2
5,790,186	-				+0.4
5,790,186	-				-0.6
5,790,186	-				-2.6
5,790,205	-				+0.4
5,790,237	+				+0.4
5,790,237	+				+0.4
5,790,241	-				-1.2
5,790,241	-				+0.4
5,790,241	-				-0.6
5,790,253	+				+0.4
5,790,253	+				+0.4
5,790,253	+				+0.4
5,790,253	+				-0.8
5,790,253	+				+0.4
5,790,253	+				-1.3
5,790,254	-				+0.4
5,790,254	-				+1.4
5,790,254	-				+0.4
5,790,254	-				+0.4
5,790,254	-				+0.4
5,790,254	-				-1.2
5,790,254	-				+0.4
5,790,254	-				-0.7
5,790,254	-				-0.6
5,790,255	+				-0.6
5,790,255	+				-0.6
5,790,255	+				-0.6
5,790,256	-				+0.4
5,790,256	-				-0.6
5,790,256	-				-0.6
5,790,266	+				+0.4
5,790,266	+				+0.4
5,790,267	-				-0.4
5,790,267	-				+0.4
5,790,283	+				-1.2
5,790,284	-				-0.6
5,790,284	-				+0.8
5,790,346	+				+0.4
5,790,375	-				-0.6