Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4717

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
5,452,983	-		Pf6N2E2_4716	0.11	+0.5
5,453,009	+		Pf6N2E2_4716	0.14	+1.1
5,453,009	+		Pf6N2E2_4716	0.14	+0.5
5,453,009	+		Pf6N2E2_4716	0.14	-0.5
5,453,009	+		Pf6N2E2_4716	0.14	+1.1
5,453,009	+		Pf6N2E2_4716	0.14	-0.5
5,453,010	-		Pf6N2E2_4716	0.15	-0.5
5,453,010	-		Pf6N2E2_4716	0.15	-1.0
5,453,010	-		Pf6N2E2_4716	0.15	-1.0
5,453,010	-		Pf6N2E2_4716	0.15	+0.5
5,453,010	-		Pf6N2E2_4716	0.15	-0.5
5,453,010	-		Pf6N2E2_4716	0.15	+0.5
5,453,010	-		Pf6N2E2_4716	0.15	-0.7
5,453,010	-		Pf6N2E2_4716	0.15	+0.5
5,453,119	-		Pf6N2E2_4716	0.30	-1.5
5,453,119	-		Pf6N2E2_4716	0.30	+0.5
5,453,145	-		Pf6N2E2_4716	0.34	-0.2
5,453,272	-		Pf6N2E2_4716	0.52	+0.5
5,453,272	-		Pf6N2E2_4716	0.52	+0.5
5,453,364	-		Pf6N2E2_4716	0.65	-2.0
5,453,364	-		Pf6N2E2_4716	0.65	-0.5
5,453,420	+		Pf6N2E2_4716	0.73	-0.9
5,453,420	+		Pf6N2E2_4716	0.73	+0.5
5,453,420	+		Pf6N2E2_4716	0.73	+0.5
5,453,421	-		Pf6N2E2_4716	0.73	-2.0
5,453,552	+				-0.5
5,453,673	-				-1.8
5,453,784	+				-1.0
5,453,837	+				+0.5
5,453,838	-				-1.0
5,453,838	-				+0.5
5,453,838	-				-1.8
5,453,951	-				-1.4
5,454,032	-				+0.5
5,454,082	+		Pf6N2E2_4717	0.13	+0.5
5,454,112	+		Pf6N2E2_4717	0.15	-0.0
5,454,112	+		Pf6N2E2_4717	0.15	+0.5
5,454,113	-		Pf6N2E2_4717	0.15	-0.5
5,454,233	+		Pf6N2E2_4717	0.25	-0.5
5,454,233	+		Pf6N2E2_4717	0.25	+0.5
5,454,234	-		Pf6N2E2_4717	0.25	+0.5
5,454,234	-		Pf6N2E2_4717	0.25	+0.5
5,454,236	-		Pf6N2E2_4717	0.25	-1.0
5,454,337	+		Pf6N2E2_4717	0.33	-1.0
5,454,337	+		Pf6N2E2_4717	0.33	-1.0
5,454,338	-		Pf6N2E2_4717	0.33	-1.5
5,454,352	+		Pf6N2E2_4717	0.34	+0.5
5,454,385	+		Pf6N2E2_4717	0.37	-0.5
5,454,452	-		Pf6N2E2_4717	0.42	-1.5
5,454,845	+		Pf6N2E2_4717	0.74	-1.5
5,454,845	+		Pf6N2E2_4717	0.74	-1.7
5,454,845	+		Pf6N2E2_4717	0.74	-0.5
5,454,845	+		Pf6N2E2_4717	0.74	+0.5
5,454,846	-		Pf6N2E2_4717	0.74	-0.5
5,454,846	-		Pf6N2E2_4717	0.74	-1.0
5,454,846	-		Pf6N2E2_4717	0.74	-1.3
5,454,846	-		Pf6N2E2_4717	0.74	-1.8
5,454,846	-		Pf6N2E2_4717	0.74	-1.4
5,455,136	+				-1.5
5,455,187	+				+0.5
5,455,187	+				-1.1
5,455,188	-				+0.5
5,455,194	+				-2.5
5,455,194	+				-0.5
5,455,194	+				-0.5
5,455,194	+				+0.5
5,455,195	-				-1.2
5,455,195	-				-1.0
5,455,195	-				-2.3
5,455,204	+				+0.5
5,455,269	+				+0.5
5,455,291	+				-0.5
5,455,339	+		Pf6N2E2_4718	0.12	-1.4
5,455,339	+		Pf6N2E2_4718	0.12	+0.5
5,455,339	+		Pf6N2E2_4718	0.12	+0.5
5,455,340	-		Pf6N2E2_4718	0.12	+0.5
5,455,444	+		Pf6N2E2_4718	0.20	-1.5
5,455,445	-		Pf6N2E2_4718	0.20	-0.5
5,455,445	-		Pf6N2E2_4718	0.20	+0.5
5,455,445	-		Pf6N2E2_4718	0.20	-0.5
5,455,471	+		Pf6N2E2_4718	0.22	-0.5
5,455,472	-		Pf6N2E2_4718	0.22	-0.5
5,455,520	-		Pf6N2E2_4718	0.26	-1.5
5,455,549	+		Pf6N2E2_4718	0.28	+0.5
5,455,622	+		Pf6N2E2_4718	0.34	+0.5
5,455,623	-		Pf6N2E2_4718	0.34	-1.5
5,456,041	+		Pf6N2E2_4718	0.68	-1.0
5,456,095	+		Pf6N2E2_4718	0.72	-1.4