Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4625

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
5,353,253	-		Pf6N2E2_4623	0.55	-0.5
5,353,390	+		Pf6N2E2_4623	0.72	-0.5
5,353,390	+		Pf6N2E2_4623	0.72	+0.5
5,353,390	+		Pf6N2E2_4623	0.72	-0.5
5,353,391	-		Pf6N2E2_4623	0.73	+0.5
5,353,391	-		Pf6N2E2_4623	0.73	+0.5
5,353,391	-		Pf6N2E2_4623	0.73	-0.1
5,353,391	-		Pf6N2E2_4623	0.73	+0.5
5,353,391	-		Pf6N2E2_4623	0.73	-0.5
5,353,558	+				-1.6
5,353,559	-				-1.6
5,353,613	+				-1.1
5,353,613	+				-0.5
5,353,613	+				-0.5
5,353,613	+				-0.6
5,353,613	+				-0.4
5,353,613	+				+0.5
5,353,614	-				+0.5
5,353,614	-				+0.5
5,353,614	-				+0.5
5,353,614	-				+0.5
5,353,614	-				-0.5
5,353,614	-				-0.5
5,353,617	+				-0.5
5,353,617	+				-0.5
5,353,617	+				+0.5
5,353,617	+				+0.5
5,353,617	+				-1.0
5,353,617	+				+0.5
5,353,617	+				+0.5
5,353,617	+				-0.6
5,353,617	+				+0.5
5,353,617	+				-1.5
5,353,617	+				+0.5
5,353,618	-				+0.5
5,353,618	-				-0.5
5,353,618	-				+0.5
5,353,618	-				-1.1
5,353,618	-				-0.4
5,353,618	-				-0.5
5,353,618	-				+0.5
5,353,618	-				-0.5
5,353,618	-				-0.5
5,353,618	-				+0.5
5,353,789	-		Pf6N2E2_4624	0.29	-0.5
5,354,450	+		Pf6N2E2_4625	0.24	-2.3
5,354,451	-		Pf6N2E2_4625	0.25	-1.5
5,354,451	-		Pf6N2E2_4625	0.25	-1.5
5,354,451	-		Pf6N2E2_4625	0.25	-0.8
5,354,564	+		Pf6N2E2_4625	0.37	+0.5
5,354,873	+		Pf6N2E2_4625	0.70	-1.1
5,354,985	-		Pf6N2E2_4625	0.83	-0.1
5,355,143	+				-0.5
5,355,143	+				-1.1
5,355,206	+				-1.1
5,355,206	+				-1.1
5,355,207	-				-0.8
5,355,218	+				+0.5
5,355,218	+				-1.5
5,355,218	+				+0.5
5,355,218	+				-0.5
5,355,218	+				-1.1
5,355,219	-				+0.5
5,355,222	+				-1.9
5,355,222	+				-0.5
5,355,222	+				+0.5
5,355,222	+				-0.5
5,355,223	-				-1.1
5,355,223	-				+0.5
5,355,423	+		Pf6N2E2_4626	0.50	+0.5
5,355,423	+		Pf6N2E2_4626	0.50	-0.5
5,355,423	+		Pf6N2E2_4626	0.50	+0.5
5,355,423	+		Pf6N2E2_4626	0.50	-0.5
5,355,423	+		Pf6N2E2_4626	0.50	-1.1
5,355,423	+		Pf6N2E2_4626	0.50	+0.5
5,355,423	+		Pf6N2E2_4626	0.50	+1.1
5,355,423	+		Pf6N2E2_4626	0.50	-1.5
5,355,424	-		Pf6N2E2_4626	0.51	-1.1
5,355,616	+				+0.5
5,355,617	-				-1.5
5,355,617	-				-0.4
5,355,617	-				-0.4
5,355,617	-				+0.5
5,355,630	+				+0.5
5,355,630	+				-0.5
5,355,630	+				-0.3
5,355,631	-				-0.5
5,355,664	-				+0.5
5,355,664	-				+0.5
5,355,664	-				-0.5
5,355,739	+		Pf6N2E2_4627	0.14	-0.5
5,355,739	+		Pf6N2E2_4627	0.14	-1.8
5,355,739	+		Pf6N2E2_4627	0.14	+0.5
5,355,740	-		Pf6N2E2_4627	0.14	-0.6
5,355,740	-		Pf6N2E2_4627	0.14	-0.5
5,356,072	+		Pf6N2E2_4627	0.58	+0.5
5,356,072	+		Pf6N2E2_4627	0.58	+0.5
5,356,072	+		Pf6N2E2_4627	0.58	+0.5
5,356,072	+		Pf6N2E2_4627	0.58	-1.1
5,356,072	+		Pf6N2E2_4627	0.58	+0.5
5,356,072	+		Pf6N2E2_4627	0.58	-0.5
5,356,072	+		Pf6N2E2_4627	0.58	+0.5
5,356,072	+		Pf6N2E2_4627	0.58	-0.3
5,356,072	+		Pf6N2E2_4627	0.58	+0.5
5,356,073	-		Pf6N2E2_4627	0.58	-0.7
5,356,073	-		Pf6N2E2_4627	0.58	-0.4
5,356,073	-		Pf6N2E2_4627	0.58	-0.5
5,356,073	-		Pf6N2E2_4627	0.58	-0.5
5,356,073	-		Pf6N2E2_4627	0.58	-1.8
5,356,073	-		Pf6N2E2_4627	0.58	+0.1
5,356,073	-		Pf6N2E2_4627	0.58	+0.5
5,356,073	-		Pf6N2E2_4627	0.58	-0.1