Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4059

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
4,735,650	+		Pf6N2E2_4058	0.32	-0.5
4,735,651	-		Pf6N2E2_4058	0.32	-1.6
4,735,653	+		Pf6N2E2_4058	0.32	+0.5
4,735,653	+		Pf6N2E2_4058	0.32	-0.6
4,735,654	-		Pf6N2E2_4058	0.32	-0.3
4,735,654	-		Pf6N2E2_4058	0.32	+0.5
4,735,654	-		Pf6N2E2_4058	0.32	-3.3
4,735,842	+		Pf6N2E2_4058	0.51	+0.5
4,735,842	+		Pf6N2E2_4058	0.51	+0.5
4,735,842	+		Pf6N2E2_4058	0.51	+0.5
4,735,843	-		Pf6N2E2_4058	0.51	+0.5
4,736,016	+		Pf6N2E2_4058	0.68	-1.6
4,736,016	+		Pf6N2E2_4058	0.68	-1.5
4,736,016	+		Pf6N2E2_4058	0.68	-0.0
4,736,017	-		Pf6N2E2_4058	0.68	+0.5
4,736,088	+		Pf6N2E2_4058	0.75	-0.5
4,736,088	+		Pf6N2E2_4058	0.75	-0.5
4,736,089	-		Pf6N2E2_4058	0.75	-0.7
4,736,089	-		Pf6N2E2_4058	0.75	-0.5
4,736,131	-		Pf6N2E2_4058	0.79	-1.8
4,736,145	+		Pf6N2E2_4058	0.80	-1.0
4,736,145	+		Pf6N2E2_4058	0.80	-0.5
4,736,145	+		Pf6N2E2_4058	0.80	-0.5
4,736,146	-		Pf6N2E2_4058	0.80	+0.5
4,736,146	-		Pf6N2E2_4058	0.80	+0.5
4,736,146	-		Pf6N2E2_4058	0.80	-0.3
4,736,187	+		Pf6N2E2_4058	0.84	-1.5
4,736,187	+		Pf6N2E2_4058	0.84	+0.5
4,736,187	+		Pf6N2E2_4058	0.84	+0.5
4,736,188	-		Pf6N2E2_4058	0.85	-0.5
4,736,188	-		Pf6N2E2_4058	0.85	-1.6
4,736,188	-		Pf6N2E2_4058	0.85	-0.5
4,736,188	-		Pf6N2E2_4058	0.85	+0.5
4,736,188	-		Pf6N2E2_4058	0.85	-0.3
4,736,287	+				-0.5
4,736,344	-				-0.0
4,736,519	+				+0.5
4,736,559	+				-0.5
4,736,559	+				-0.5
4,736,559	+				+1.5
4,736,559	+				-0.5
4,736,559	+				-0.2
4,736,560	-				+0.5
4,736,560	-				+0.5
4,736,560	-				-1.5
4,736,560	-				+0.5
4,736,572	+				-2.6
4,736,609	+		Pf6N2E2_4059	0.14	-2.3
4,736,840	+				+0.5
4,736,840	+				+0.5
4,736,841	-				-0.5
4,736,879	+				+0.5
4,736,879	+				-1.0
4,736,879	+				-1.0
4,736,879	+				-1.0
4,736,879	+				-1.0
4,736,879	+				-0.5
4,736,879	+				-0.9
4,736,879	+				+0.5
4,736,879	+				-0.9
4,736,879	+				+0.5
4,736,879	+				-0.5
4,736,879	+				-1.0
4,736,879	+				+0.5
4,736,880	-				+0.5
4,736,880	-				-1.0
4,736,880	-				+0.5
4,736,880	-				-1.0
4,736,880	-				+0.5
4,736,880	-				+0.5
4,736,880	-				-0.5
4,736,880	-				+0.5
4,736,880	-				+0.5
4,736,880	-				-0.5
4,736,928	+				+0.5
4,736,928	+				-1.0
4,736,929	-				-1.9
4,737,035	+				-0.5
4,737,190	+		Pf6N2E2_4060	0.13	+0.5
4,737,190	+		Pf6N2E2_4060	0.13	-0.5
4,737,190	+		Pf6N2E2_4060	0.13	+0.5
4,737,191	-		Pf6N2E2_4060	0.13	-1.0
4,737,258	+		Pf6N2E2_4060	0.19	+0.5
4,737,330	+		Pf6N2E2_4060	0.25	+0.5
4,737,330	+		Pf6N2E2_4060	0.25	+0.5
4,737,330	+		Pf6N2E2_4060	0.25	-0.5
4,737,330	+		Pf6N2E2_4060	0.25	-0.5
4,737,330	+		Pf6N2E2_4060	0.25	-0.1
4,737,330	+		Pf6N2E2_4060	0.25	-0.7
4,737,330	+		Pf6N2E2_4060	0.25	+0.5
4,737,330	+		Pf6N2E2_4060	0.25	-1.0
4,737,330	+		Pf6N2E2_4060	0.25	-0.6
4,737,330	+		Pf6N2E2_4060	0.25	-0.5
4,737,330	+		Pf6N2E2_4060	0.25	-0.5
4,737,331	-		Pf6N2E2_4060	0.25	+0.5
4,737,331	-		Pf6N2E2_4060	0.25	+0.5
4,737,331	-		Pf6N2E2_4060	0.25	-0.3
4,737,331	-		Pf6N2E2_4060	0.25	-1.0
4,737,331	-		Pf6N2E2_4060	0.25	-1.0
4,737,331	-		Pf6N2E2_4060	0.25	+0.5
4,737,331	-		Pf6N2E2_4060	0.25	-0.5
4,737,331	-		Pf6N2E2_4060	0.25	-0.7
4,737,331	-		Pf6N2E2_4060	0.25	-1.2
4,737,331	-		Pf6N2E2_4060	0.25	-0.7
4,737,331	-		Pf6N2E2_4060	0.25	+0.5
4,737,331	-		Pf6N2E2_4060	0.25	-0.4
4,737,331	-		Pf6N2E2_4060	0.25	-0.7
4,737,375	+		Pf6N2E2_4060	0.29	-1.5
4,737,375	+		Pf6N2E2_4060	0.29	+0.1
4,737,375	+		Pf6N2E2_4060	0.29	+0.9
4,737,376	-		Pf6N2E2_4060	0.29	-0.4
4,737,376	-		Pf6N2E2_4060	0.29	+0.5
4,737,376	-		Pf6N2E2_4060	0.29	-0.5
4,737,376	-		Pf6N2E2_4060	0.29	-2.5
4,737,376	-		Pf6N2E2_4060	0.29	-0.5
4,737,376	-		Pf6N2E2_4060	0.29	-2.0
4,737,376	-		Pf6N2E2_4060	0.29	-0.5
4,737,614	+		Pf6N2E2_4060	0.50	-0.0
4,737,614	+		Pf6N2E2_4060	0.50	-1.0
4,737,615	-		Pf6N2E2_4060	0.50	-0.5
4,737,687	+		Pf6N2E2_4060	0.56	-1.0
4,737,688	-		Pf6N2E2_4060	0.56	-0.4
4,737,688	-		Pf6N2E2_4060	0.56	-2.0
4,737,688	-		Pf6N2E2_4060	0.56	-1.3
4,737,789	+		Pf6N2E2_4060	0.65	+0.3
4,737,789	+		Pf6N2E2_4060	0.65	-0.3
4,737,789	+		Pf6N2E2_4060	0.65	-0.5
4,737,789	+		Pf6N2E2_4060	0.65	-1.0
4,737,790	-		Pf6N2E2_4060	0.65	+0.5
4,737,790	-		Pf6N2E2_4060	0.65	-0.5
4,737,790	-		Pf6N2E2_4060	0.65	+0.5