Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3902

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
4,534,956	-				+0.5
4,534,966	-				+0.5
4,535,000	-				+0.5
4,535,000	-				-0.5
4,535,000	-				-0.5
4,535,338	-		Pf6N2E2_3901	0.36	-0.1
4,535,530	-		Pf6N2E2_3901	0.83	-1.1
4,535,620	-				-0.5
4,535,620	-				-1.1
4,535,620	-				+0.5
4,535,631	+				+0.5
4,535,631	+				+0.5
4,535,631	+				+0.5
4,535,631	+				+0.5
4,535,631	+				+0.5
4,535,632	-				+0.5
4,535,672	+				-0.5
4,535,673	-				+0.5
4,535,673	-				-0.5
4,535,673	-				-0.4
4,535,713	-				-0.8
4,535,743	+				+0.5
4,535,744	-				-0.2
4,535,747	+				+0.5
4,535,747	+				-1.5
4,535,747	+				-0.5
4,535,747	+				-1.1
4,535,748	-				-0.5
4,535,748	-				-0.5
4,535,748	-				-1.1
4,535,748	-				+0.8
4,535,748	-				+0.5
4,535,748	-				+0.5
4,535,748	-				+0.5
4,535,748	-				+0.5
4,535,768	+				-1.2
4,535,769	-				+0.5
4,535,769	-				-1.9
4,535,812	+				-1.1
4,535,812	+				-1.1
4,535,812	+				+0.5
4,535,813	-				-0.5
4,535,813	-				+0.5
4,535,832	-				+0.5
4,536,078	-		Pf6N2E2_3902	0.43	-0.5
4,536,109	+		Pf6N2E2_3902	0.50	+0.5
4,536,110	-		Pf6N2E2_3902	0.50	+0.5
4,536,256	+		Pf6N2E2_3902	0.86	-2.1
4,536,256	+		Pf6N2E2_3902	0.86	-1.8
4,536,256	+		Pf6N2E2_3902	0.86	-1.2
4,536,257	-		Pf6N2E2_3902	0.86	-1.5
4,536,257	-		Pf6N2E2_3902	0.86	-0.9
4,536,257	-		Pf6N2E2_3902	0.86	-0.5
4,536,257	-		Pf6N2E2_3902	0.86	-2.5
4,536,291	+				-0.5
4,536,291	+				-0.3
4,536,291	+				+1.2
4,536,348	+				-1.1
4,536,348	+				+0.5
4,536,348	+				-0.4
4,536,349	-				+0.5
4,536,423	+		Pf6N2E2_3903	0.12	-0.6
4,536,423	+		Pf6N2E2_3903	0.12	-0.5
4,536,525	+		Pf6N2E2_3903	0.24	-0.5
4,536,525	+		Pf6N2E2_3903	0.24	+0.5
4,536,525	+		Pf6N2E2_3903	0.24	-0.9
4,536,525	+		Pf6N2E2_3903	0.24	-1.1
4,536,525	+		Pf6N2E2_3903	0.24	-0.5
4,536,846	+		Pf6N2E2_3903	0.59	+0.2
4,536,846	+		Pf6N2E2_3903	0.59	-0.5
4,536,846	+		Pf6N2E2_3903	0.59	+0.5
4,536,847	-		Pf6N2E2_3903	0.59	+0.5
4,536,847	-		Pf6N2E2_3903	0.59	+0.5
4,536,847	-		Pf6N2E2_3903	0.59	+0.5
4,536,847	-		Pf6N2E2_3903	0.59	-1.1
4,536,847	-		Pf6N2E2_3903	0.59	+0.5
4,536,987	-		Pf6N2E2_3903	0.75	-0.5
4,537,130	+				+0.5
4,537,130	+				-0.5
4,537,216	-				-0.5
4,537,243	+				-0.5
4,537,244	-				+0.5
4,537,297	-				+0.5
4,537,297	-				-0.1