Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3852

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
4,482,947	+		Pf6N2E2_3850	0.72	+0.5
4,482,979	+		Pf6N2E2_3850	0.75	-0.1
4,482,980	-		Pf6N2E2_3850	0.75	-0.5
4,482,980	-		Pf6N2E2_3850	0.75	+0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	-0.3
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	-1.1
4,483,006	+		Pf6N2E2_3850	0.78	+0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.4
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	-0.9
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	-0.4
4,483,006	+		Pf6N2E2_3850	0.78	-0.7
4,483,006	+		Pf6N2E2_3850	0.78	-0.2
4,483,006	+		Pf6N2E2_3850	0.78	+0.8
4,483,006	+		Pf6N2E2_3850	0.78	+0.0
4,483,006	+		Pf6N2E2_3850	0.78	+0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.6
4,483,006	+		Pf6N2E2_3850	0.78	+0.1
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	+1.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.8
4,483,006	+		Pf6N2E2_3850	0.78	-0.2
4,483,006	+		Pf6N2E2_3850	0.78	-0.5
4,483,006	+		Pf6N2E2_3850	0.78	-0.5
4,483,006	+		Pf6N2E2_3850	0.78	+0.2
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.3
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-1.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.4
4,483,007	-		Pf6N2E2_3850	0.78	-0.3
4,483,007	-		Pf6N2E2_3850	0.78	-0.7
4,483,007	-		Pf6N2E2_3850	0.78	-1.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.7
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.5
4,483,007	-		Pf6N2E2_3850	0.78	-1.1
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,007	-		Pf6N2E2_3850	0.78	-0.3
4,483,007	-		Pf6N2E2_3850	0.78	-1.6
4,483,007	-		Pf6N2E2_3850	0.78	-1.1
4,483,007	-		Pf6N2E2_3850	0.78	-0.1
4,483,007	-		Pf6N2E2_3850	0.78	+0.5
4,483,019	-		Pf6N2E2_3850	0.79	+1.5
4,483,109	+		Pf6N2E2_3850	0.88	-1.1
4,483,109	+		Pf6N2E2_3850	0.88	-0.7
4,483,109	+		Pf6N2E2_3850	0.88	-0.6
4,483,109	+		Pf6N2E2_3850	0.88	-0.5
4,483,144	+				-0.2
4,483,179	+				+0.5
4,483,179	+				-0.4
4,483,179	+				-0.1
4,483,180	-				+0.5
4,483,180	-				-0.5
4,483,286	+				+0.5
4,483,287	-				-0.5
4,483,287	-				-0.6
4,483,287	-				-0.5
4,483,294	-				-1.5
4,483,331	+				+0.6
4,483,357	+				-0.2
4,483,358	-				+0.5
4,483,460	-		Pf6N2E2_3851	0.20	-0.5
4,483,480	+		Pf6N2E2_3851	0.23	-1.1
4,483,483	+		Pf6N2E2_3851	0.24	+0.5
4,483,483	+		Pf6N2E2_3851	0.24	+0.5
4,483,484	-		Pf6N2E2_3851	0.24	-1.1
4,483,484	-		Pf6N2E2_3851	0.24	+0.5
4,483,492	+		Pf6N2E2_3851	0.25	+0.5
4,483,493	-		Pf6N2E2_3851	0.25	-1.1
4,483,493	-		Pf6N2E2_3851	0.25	+0.5
4,483,493	-		Pf6N2E2_3851	0.25	-1.1
4,483,520	+		Pf6N2E2_3851	0.30	-0.5
4,483,520	+		Pf6N2E2_3851	0.30	-0.1
4,483,520	+		Pf6N2E2_3851	0.30	-1.8
4,483,521	-		Pf6N2E2_3851	0.30	-0.5
4,483,521	-		Pf6N2E2_3851	0.30	+0.5
4,483,521	-		Pf6N2E2_3851	0.30	+0.5
4,483,521	-		Pf6N2E2_3851	0.30	-1.5
4,483,521	-		Pf6N2E2_3851	0.30	-0.5
4,483,521	-		Pf6N2E2_3851	0.30	-0.5
4,483,521	-		Pf6N2E2_3851	0.30	-0.7
4,483,632	+		Pf6N2E2_3851	0.48	+0.5
4,483,633	-		Pf6N2E2_3851	0.49	+0.5
4,483,682	+		Pf6N2E2_3851	0.57	-1.1
4,483,687	+		Pf6N2E2_3851	0.57	-1.8
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	-1.2
4,483,687	+		Pf6N2E2_3851	0.57	+0.5
4,483,687	+		Pf6N2E2_3851	0.57	+0.5
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	-0.7
4,483,687	+		Pf6N2E2_3851	0.57	-0.7
4,483,687	+		Pf6N2E2_3851	0.57	-0.7
4,483,687	+		Pf6N2E2_3851	0.57	-0.4
4,483,687	+		Pf6N2E2_3851	0.57	-0.6
4,483,687	+		Pf6N2E2_3851	0.57	+0.5
4,483,687	+		Pf6N2E2_3851	0.57	-1.1
4,483,687	+		Pf6N2E2_3851	0.57	+0.9
4,483,687	+		Pf6N2E2_3851	0.57	-1.1
4,483,687	+		Pf6N2E2_3851	0.57	+0.5
4,483,687	+		Pf6N2E2_3851	0.57	-1.1
4,483,687	+		Pf6N2E2_3851	0.57	-1.3
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	+0.2
4,483,687	+		Pf6N2E2_3851	0.57	-0.2
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	-0.5
4,483,687	+		Pf6N2E2_3851	0.57	+0.1
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.5
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.5
4,483,688	-		Pf6N2E2_3851	0.58	-0.2
4,483,688	-		Pf6N2E2_3851	0.58	-1.5
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,688	-		Pf6N2E2_3851	0.58	+0.5
4,483,789	+		Pf6N2E2_3851	0.74	-0.1
4,483,789	+		Pf6N2E2_3851	0.74	+0.5
4,483,789	+		Pf6N2E2_3851	0.74	-0.1
4,483,789	+		Pf6N2E2_3851	0.74	-1.5
4,483,789	+		Pf6N2E2_3851	0.74	-0.5
4,483,790	-		Pf6N2E2_3851	0.74	+0.5
4,483,790	-		Pf6N2E2_3851	0.74	+0.5
4,483,801	-		Pf6N2E2_3851	0.76	-0.5
4,483,831	+		Pf6N2E2_3851	0.81	-1.5
4,483,831	+		Pf6N2E2_3851	0.81	-0.5
4,483,832	-		Pf6N2E2_3851	0.81	+0.5
4,483,934	+				+0.5
4,483,934	+				+0.5
4,483,935	-				+0.5
4,483,940	+				-0.2
4,483,940	+				-0.5
4,483,940	+				+1.1
4,483,941	-				-0.5
4,483,941	-				-0.5
4,483,941	-				-2.5
4,484,452	-		Pf6N2E2_3852	0.23	-0.5
4,484,517	+		Pf6N2E2_3852	0.26	-2.3
4,484,517	+		Pf6N2E2_3852	0.26	-0.5
4,484,517	+		Pf6N2E2_3852	0.26	-0.5
4,484,517	+		Pf6N2E2_3852	0.26	-0.5
4,484,518	-		Pf6N2E2_3852	0.26	-0.5
4,484,518	-		Pf6N2E2_3852	0.26	-0.5
4,484,571	+		Pf6N2E2_3852	0.28	+0.5
4,484,610	+		Pf6N2E2_3852	0.30	-1.1
4,484,611	-		Pf6N2E2_3852	0.30	+0.5
4,484,713	-		Pf6N2E2_3852	0.35	-0.5
4,485,104	+		Pf6N2E2_3852	0.52	+0.5
4,485,104	+		Pf6N2E2_3852	0.52	+0.5
4,485,104	+		Pf6N2E2_3852	0.52	-0.5
4,485,104	+		Pf6N2E2_3852	0.52	-0.5
4,485,104	+		Pf6N2E2_3852	0.52	-0.5
4,485,104	+		Pf6N2E2_3852	0.52	+0.5
4,485,105	-		Pf6N2E2_3852	0.52	-0.5
4,485,105	-		Pf6N2E2_3852	0.52	-0.5
4,485,105	-		Pf6N2E2_3852	0.52	-1.5
4,485,105	-		Pf6N2E2_3852	0.52	+0.5
4,485,105	-		Pf6N2E2_3852	0.52	+0.5
4,486,071	+				-0.5
4,486,071	+				+0.5
4,486,072	-				-0.5
4,486,155	-				+0.5
4,486,155	-				+0.5
4,486,309	+		Pf6N2E2_3853	0.21	-0.5
4,486,310	-		Pf6N2E2_3853	0.21	-0.5
4,486,348	+		Pf6N2E2_3853	0.30	-1.8
4,486,348	+		Pf6N2E2_3853	0.30	+0.5
4,486,349	-		Pf6N2E2_3853	0.30	-0.5
4,486,349	-		Pf6N2E2_3853	0.30	+0.5
4,486,349	-		Pf6N2E2_3853	0.30	+0.5
4,486,413	+		Pf6N2E2_3853	0.44	-0.5
4,486,414	-		Pf6N2E2_3853	0.44	+0.5
4,486,774	+		Pf6N2E2_3854	0.23	+0.5
4,486,774	+		Pf6N2E2_3854	0.23	+0.8
4,486,775	-		Pf6N2E2_3854	0.23	+0.5
4,486,775	-		Pf6N2E2_3854	0.23	+0.5
4,486,775	-		Pf6N2E2_3854	0.23	+0.5
4,486,879	+		Pf6N2E2_3854	0.46	-0.7
4,486,879	+		Pf6N2E2_3854	0.46	+0.5
4,486,879	+		Pf6N2E2_3854	0.46	+0.5
4,486,880	-		Pf6N2E2_3854	0.46	-0.1
4,486,880	-		Pf6N2E2_3854	0.46	+0.3
4,486,880	-		Pf6N2E2_3854	0.46	-0.3
4,486,880	-		Pf6N2E2_3854	0.46	+0.7
4,486,921	+		Pf6N2E2_3854	0.56	-0.5
4,486,921	+		Pf6N2E2_3854	0.56	-0.5
4,486,921	+		Pf6N2E2_3854	0.56	-1.5
4,486,922	-		Pf6N2E2_3854	0.56	-0.5
4,486,922	-		Pf6N2E2_3854	0.56	-0.3
4,486,978	+		Pf6N2E2_3854	0.68	-1.1
4,486,978	+		Pf6N2E2_3854	0.68	+0.5
4,486,978	+		Pf6N2E2_3854	0.68	+0.5
4,486,978	+		Pf6N2E2_3854	0.68	+0.5
4,486,978	+		Pf6N2E2_3854	0.68	-0.1
4,486,978	+		Pf6N2E2_3854	0.68	-0.5
4,486,978	+		Pf6N2E2_3854	0.68	+0.5
4,486,978	+		Pf6N2E2_3854	0.68	+0.5
4,486,979	-		Pf6N2E2_3854	0.68	+0.5
4,486,979	-		Pf6N2E2_3854	0.68	-0.1
4,486,979	-		Pf6N2E2_3854	0.68	+0.5
4,486,979	-		Pf6N2E2_3854	0.68	+0.5
4,487,105	-				-1.1
4,487,105	-				-0.8
4,487,105	-				-1.8
4,487,111	+				-1.0
4,487,111	+				-1.5
4,487,112	-				-0.5
4,487,112	-				+0.5
4,487,112	-				-0.2
4,487,112	-				-0.9
4,487,112	-				-1.8
4,487,136	+				+0.5
4,487,137	-				-1.4
4,487,174	+				+0.5