Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3790

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
4,413,519	-				-0.1
4,413,519	-				+0.5
4,413,569	+				+0.5
4,413,670	+				-0.5
4,413,670	+				+0.5
4,413,671	-				-1.8
4,413,713	-				-1.4
4,413,721	+				-1.1
4,413,721	+				+0.3
4,413,775	-				+0.5
4,413,791	+				-0.5
4,413,792	-				-1.5
4,414,082	+				-1.1
4,414,082	+				-0.6
4,414,083	-				+0.5
4,414,083	-				+0.5
4,414,110	-				-0.5
4,414,123	+				+0.5
4,414,138	+				-0.5
4,414,138	+				-1.1
4,414,139	-				-1.1
4,414,151	+				-0.5
4,414,151	+				-0.8
4,414,151	+				+0.5
4,414,151	+				+0.5
4,414,151	+				-1.1
4,414,151	+				-1.1
4,414,151	+				-0.5
4,414,151	+				-0.5
4,414,152	-				-0.5
4,414,152	-				+0.5
4,414,152	-				-1.1
4,414,152	-				+0.5
4,414,152	-				-0.8
4,414,152	-				+0.5
4,414,152	-				-1.5
4,414,152	-				-0.5
4,414,155	+				-1.1
4,414,155	+				+0.5
4,414,155	+				-0.5
4,414,156	-				-1.1
4,414,156	-				-0.5
4,414,156	-				-0.5
4,414,156	-				-1.1
4,414,156	-				-1.1
4,414,217	+				-0.5
4,414,217	+				-0.5
4,414,217	+				-1.1
4,414,217	+				-1.1
4,414,217	+				+0.5
4,414,217	+				+0.5
4,414,218	-				-0.2
4,414,218	-				+1.5
4,414,218	-				+0.5
4,414,223	+				-0.5
4,414,223	+				-0.5
4,414,224	-				+0.5
4,414,266	-				+0.5
4,414,319	+				+1.5
4,414,320	-				+0.5
4,414,431	-				-0.5
4,414,431	-				+0.5
4,414,555	+		Pf6N2E2_3790	0.24	-0.3
4,414,556	-		Pf6N2E2_3790	0.24	-0.5
4,414,556	-		Pf6N2E2_3790	0.24	+0.0
4,414,558	+		Pf6N2E2_3790	0.25	-0.5
4,414,558	+		Pf6N2E2_3790	0.25	+0.5
4,414,743	+		Pf6N2E2_3790	0.79	+1.4
4,414,743	+		Pf6N2E2_3790	0.79	+0.5
4,414,744	-		Pf6N2E2_3790	0.79	-0.5
4,414,744	-		Pf6N2E2_3790	0.79	+0.5
4,414,744	-		Pf6N2E2_3790	0.79	-1.1
4,414,805	+				+2.5
4,414,805	+				+0.5
4,414,805	+				+0.5
4,414,805	+				-0.5
4,414,805	+				-2.1
4,414,805	+				-0.5
4,414,805	+				-0.5
4,414,805	+				+0.5
4,414,806	-				-0.5
4,414,806	-				+0.5
4,414,806	-				-0.5
4,414,806	-				-0.9
4,414,806	-				-0.8
4,414,806	-				+0.5
4,414,806	-				-0.5
4,414,806	-				+0.5
4,414,806	-				+0.5
4,414,806	-				+0.5
4,414,806	-				+0.5
4,414,806	-				+0.5
4,414,806	-				-0.5
4,414,806	-				-0.5
4,414,929	+				+0.5
4,415,295	-		Pf6N2E2_3791	0.11	-0.5
4,415,375	+		Pf6N2E2_3791	0.14	-0.4
4,415,375	+		Pf6N2E2_3791	0.14	+0.5
4,415,375	+		Pf6N2E2_3791	0.14	+0.5
4,415,375	+		Pf6N2E2_3791	0.14	+0.5
4,415,375	+		Pf6N2E2_3791	0.14	-0.6
4,415,376	-		Pf6N2E2_3791	0.14	+0.3
4,415,376	-		Pf6N2E2_3791	0.14	-0.5
4,415,412	-		Pf6N2E2_3791	0.16	-1.5
4,415,412	-		Pf6N2E2_3791	0.16	-0.5