Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3277

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
3,779,950	+		Pf6N2E2_3276	0.65	+0.3
3,779,950	+		Pf6N2E2_3276	0.65	+0.4
3,779,950	+		Pf6N2E2_3276	0.65	-1.4
3,779,951	-		Pf6N2E2_3276	0.65	-0.6
3,779,951	-		Pf6N2E2_3276	0.65	+0.4
3,780,194	-		Pf6N2E2_3276	0.83	+0.4
3,780,253	+		Pf6N2E2_3276	0.87	-1.1
3,780,254	-		Pf6N2E2_3276	0.87	-1.7
3,780,254	-		Pf6N2E2_3276	0.87	-1.1
3,780,254	-		Pf6N2E2_3276	0.87	-0.6
3,780,315	+				-0.1
3,780,315	+				-0.6
3,780,316	-				+0.4
3,780,316	-				+0.4
3,780,316	-				-0.6
3,780,424	-				-1.1
3,780,424	-				-0.6
3,780,424	-				+0.4
3,780,426	+				+0.4
3,780,426	+				+0.4
3,780,426	+				-1.1
3,780,426	+				-0.6
3,780,427	-				-0.7
3,780,427	-				-1.6
3,780,427	-				+0.4
3,780,427	-				-1.1
3,780,427	-				+0.4
3,780,457	+				+0.1
3,780,458	-				-1.1
3,780,458	-				-1.1
3,780,458	-				-2.1
3,780,714	+		Pf6N2E2_3277	0.73	+0.4
3,780,714	+		Pf6N2E2_3277	0.73	-1.9
3,780,715	-		Pf6N2E2_3277	0.73	-0.6
3,780,792	+				-1.1
3,780,792	+				-0.6
3,780,793	-				+0.4
3,780,793	-				-0.9
3,780,793	-				-2.1
3,780,950	+				+0.0
3,781,189	+				-1.4
3,781,216	-				-0.1
3,781,295	+		Pf6N2E2_3278	0.14	-0.6
3,781,296	-		Pf6N2E2_3278	0.14	-0.6
3,781,296	-		Pf6N2E2_3278	0.14	-1.9
3,781,410	+		Pf6N2E2_3278	0.22	-0.6
3,781,411	-		Pf6N2E2_3278	0.23	+0.4
3,781,463	+		Pf6N2E2_3278	0.26	+0.4
3,781,463	+		Pf6N2E2_3278	0.26	-1.1
3,781,463	+		Pf6N2E2_3278	0.26	-1.3
3,781,464	-		Pf6N2E2_3278	0.26	-0.6
3,781,478	+		Pf6N2E2_3278	0.27	+0.4
3,781,478	+		Pf6N2E2_3278	0.27	+1.2
3,781,478	+		Pf6N2E2_3278	0.27	+0.4
3,781,478	+		Pf6N2E2_3278	0.27	+0.4
3,781,478	+		Pf6N2E2_3278	0.27	+0.4
3,781,478	+		Pf6N2E2_3278	0.27	+0.4
3,781,479	-		Pf6N2E2_3278	0.28	-1.6
3,781,479	-		Pf6N2E2_3278	0.28	+0.4
3,781,517	+		Pf6N2E2_3278	0.30	+0.4
3,781,517	+		Pf6N2E2_3278	0.30	-0.6
3,781,518	-		Pf6N2E2_3278	0.30	+0.4
3,781,518	-		Pf6N2E2_3278	0.30	+0.4
3,781,518	-		Pf6N2E2_3278	0.30	-1.1