Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3030

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
3,513,214	+				-0.6
3,513,214	+				+0.4
3,513,214	+				-1.9
3,513,240	+				-0.6
3,513,252	-		Pf6N2E2_3028	0.11	+0.4
3,513,305	-		Pf6N2E2_3028	0.21	-0.4
3,513,340	+		Pf6N2E2_3028	0.28	-0.5
3,513,341	-		Pf6N2E2_3028	0.28	-0.6
3,513,341	-		Pf6N2E2_3028	0.28	-0.6
3,513,341	-		Pf6N2E2_3028	0.28	+0.7
3,513,341	-		Pf6N2E2_3028	0.28	+0.4
3,513,640	+		Pf6N2E2_3028	0.87	-0.6
3,513,641	-		Pf6N2E2_3028	0.87	-1.2
3,513,724	+				+0.4
3,513,724	+				+0.4
3,513,725	-				-2.5
3,513,901	+		Pf6N2E2_3029	0.45	+0.4
3,513,901	+		Pf6N2E2_3029	0.45	-1.2
3,513,901	+		Pf6N2E2_3029	0.45	+0.4
3,513,901	+		Pf6N2E2_3029	0.45	-1.2
3,513,901	+		Pf6N2E2_3029	0.45	+0.4
3,513,901	+		Pf6N2E2_3029	0.45	+0.4
3,513,901	+		Pf6N2E2_3029	0.45	-3.2
3,513,902	-		Pf6N2E2_3029	0.45	+0.4
3,513,902	-		Pf6N2E2_3029	0.45	-0.8
3,514,116	+				+0.4
3,514,117	-				-1.4
3,514,136	-				-1.5
3,514,163	-				+0.4
3,514,192	-				+0.4
3,514,192	-				-0.8
3,514,215	+				-1.2
3,514,215	+				+0.4
3,514,216	-				+0.4
3,514,216	-				-0.7
3,514,216	-				+0.4
3,514,216	-				+0.4
3,514,245	+				+0.4
3,514,245	+				+0.4
3,514,245	+				-0.6
3,514,245	+				+0.4
3,514,245	+				-0.6
3,514,246	-				-1.2
3,514,257	+		Pf6N2E2_3030	0.10	+0.4
3,514,258	-		Pf6N2E2_3030	0.10	+0.4
3,514,258	-		Pf6N2E2_3030	0.10	-1.0
3,514,258	-		Pf6N2E2_3030	0.10	-0.6
3,514,263	+		Pf6N2E2_3030	0.11	-0.5
3,514,264	-		Pf6N2E2_3030	0.12	-2.2
3,514,264	-		Pf6N2E2_3030	0.12	+0.4
3,514,264	-		Pf6N2E2_3030	0.12	-1.2
3,514,264	-		Pf6N2E2_3030	0.12	-0.6
3,514,264	-		Pf6N2E2_3030	0.12	-0.6
3,514,315	-		Pf6N2E2_3030	0.24	+0.4
3,514,343	+		Pf6N2E2_3030	0.30	-1.0
3,514,343	+		Pf6N2E2_3030	0.30	+0.4
3,514,343	+		Pf6N2E2_3030	0.30	+0.1
3,514,348	+		Pf6N2E2_3030	0.31	+1.4
3,514,349	-		Pf6N2E2_3030	0.31	+0.4
3,514,349	-		Pf6N2E2_3030	0.31	+0.4
3,514,481	-		Pf6N2E2_3030	0.62	-0.2
3,514,481	-		Pf6N2E2_3030	0.62	-0.7
3,514,539	+		Pf6N2E2_3030	0.76	-0.8
3,514,539	+		Pf6N2E2_3030	0.76	-1.2
3,514,539	+		Pf6N2E2_3030	0.76	+0.4
3,514,539	+		Pf6N2E2_3030	0.76	+0.4
3,514,539	+		Pf6N2E2_3030	0.76	+0.4
3,514,540	-		Pf6N2E2_3030	0.76	+0.4
3,514,644	-				-0.7
3,514,659	-				-2.2
3,514,713	+				+0.4
3,514,714	-				+0.4
3,514,746	+				-1.9
3,514,746	+				+0.4
3,514,746	+				+0.4
3,514,747	-				-2.4
3,514,749	+				-0.8
3,514,749	+				-0.7
3,514,749	+				-1.7
3,514,749	+				-0.6
3,514,750	-				-3.2
3,514,750	-				-1.2
3,514,750	-				-0.6
3,514,892	+				-0.6
3,514,910	+				-0.6
3,514,984	+				+0.4
3,514,985	-				-2.2
3,515,115	+				-0.6
3,515,169	+				-0.6
3,515,170	-				+0.4