Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2728

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
3,218,497	-		Pf6N2E2_2727	0.33	-2.6
3,218,657	+		Pf6N2E2_2727	0.47	-0.7
3,218,658	-		Pf6N2E2_2727	0.47	+0.4
3,218,666	+		Pf6N2E2_2727	0.48	-0.6
3,218,730	-		Pf6N2E2_2727	0.53	+0.4
3,218,761	+		Pf6N2E2_2727	0.56	-1.2
3,218,801	+		Pf6N2E2_2727	0.60	+0.4
3,218,802	-		Pf6N2E2_2727	0.60	-0.6
3,218,928	-		Pf6N2E2_2727	0.71	+1.4
3,219,046	+		Pf6N2E2_2727	0.81	+0.4
3,219,046	+		Pf6N2E2_2727	0.81	-0.6
3,219,046	+		Pf6N2E2_2727	0.81	+0.4
3,219,047	-		Pf6N2E2_2727	0.81	-0.6
3,219,135	+		Pf6N2E2_2727	0.89	+0.4
3,219,136	-		Pf6N2E2_2727	0.89	+0.4
3,219,136	-		Pf6N2E2_2727	0.89	+0.4
3,219,140	+		Pf6N2E2_2727	0.90	+0.4
3,219,141	-		Pf6N2E2_2727	0.90	+0.4
3,219,247	-				-0.5
3,219,288	+				+0.4
3,219,288	+				+0.4
3,219,288	+				+0.4
3,219,288	+				-0.6
3,219,288	+				+0.4
3,219,288	+				-1.2
3,219,288	+				+0.4
3,219,288	+				-0.6
3,219,288	+				+0.4
3,219,289	-				+0.0
3,219,289	-				-1.6
3,219,289	-				-2.1
3,219,289	-				-0.2
3,219,289	-				-0.9
3,219,289	-				-0.5
3,219,289	-				+0.4
3,219,289	-				-0.9
3,219,289	-				-0.6
3,219,289	-				+0.4
3,219,289	-				+1.4
3,219,289	-				+0.4
3,219,289	-				-1.2
3,219,290	+				-0.6
3,219,290	+				-0.6
3,219,290	+				-0.6
3,219,290	+				+0.4
3,219,290	+				-1.6
3,219,290	+				+0.4
3,219,290	+				-0.4
3,219,290	+				-0.9
3,219,291	-				+0.4
3,219,291	-				+0.4
3,219,291	-				-0.4
3,219,291	-				-0.9
3,219,291	-				-1.2
3,219,291	-				-1.2
3,219,291	-				-1.1
3,219,291	-				-1.0
3,219,291	-				-0.1
3,219,291	-				+0.4
3,219,291	-				-0.6
3,219,291	-				+0.4
3,219,291	-				+0.4
3,219,293	-				+0.4
3,219,320	+				+0.4
3,219,363	+				+0.4
3,219,363	+				-0.4
3,219,364	-				-1.2
3,219,364	-				+0.4
3,219,364	-				-0.6
3,219,364	-				-0.6
3,219,364	-				+0.4
3,219,369	+				+0.4
3,219,369	+				+0.4
3,219,369	+				+0.4
3,219,369	+				-0.6
3,219,369	+				+0.4
3,219,369	+				+0.4
3,219,370	-				-0.6
3,219,370	-				+0.4
3,219,370	-				-1.0
3,219,370	-				+0.4
3,219,370	-				-0.8
3,219,370	-				+0.4
3,219,370	-				-1.8
3,219,381	+				+0.4
3,219,382	-				-1.4
3,219,402	+				-1.2
3,219,402	+				-1.0
3,219,403	-				-0.4
3,219,403	-				+0.4
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,652	+		Pf6N2E2_2728	0.50	-0.6
3,219,652	+		Pf6N2E2_2728	0.50	-0.6
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,652	+		Pf6N2E2_2728	0.50	-1.2
3,219,652	+		Pf6N2E2_2728	0.50	+0.4
3,219,653	-		Pf6N2E2_2728	0.50	+0.4
3,219,653	-		Pf6N2E2_2728	0.50	-0.6
3,219,653	-		Pf6N2E2_2728	0.50	-2.3
3,219,653	-		Pf6N2E2_2728	0.50	-0.6
3,219,653	-		Pf6N2E2_2728	0.50	-1.6
3,219,653	-		Pf6N2E2_2728	0.50	-1.2
3,219,653	-		Pf6N2E2_2728	0.50	-0.6
3,219,653	-		Pf6N2E2_2728	0.50	+0.4
3,219,653	-		Pf6N2E2_2728	0.50	-0.6
3,219,890	+				+0.4
3,220,021	+				+0.4
3,220,021	+				-0.6
3,220,021	+				+0.4
3,220,021	+				+0.4
3,220,022	-				+0.4
3,220,022	-				-0.6
3,220,160	+				-0.6
3,220,160	+				+0.4
3,220,160	+				-0.7
3,220,160	+				+0.4
3,220,161	-				-1.0
3,220,161	-				+0.4
3,220,277	+		Pf6N2E2_2729	0.11	+0.4
3,220,278	-		Pf6N2E2_2729	0.11	-0.6
3,220,278	-		Pf6N2E2_2729	0.11	-0.7
3,220,337	+		Pf6N2E2_2729	0.15	+0.4
3,220,337	+		Pf6N2E2_2729	0.15	-0.4
3,220,337	+		Pf6N2E2_2729	0.15	+1.4
3,220,337	+		Pf6N2E2_2729	0.15	+0.4
3,220,337	+		Pf6N2E2_2729	0.15	-1.6
3,220,338	-		Pf6N2E2_2729	0.15	+0.4
3,220,338	-		Pf6N2E2_2729	0.15	-0.6
3,220,338	-		Pf6N2E2_2729	0.15	-0.0
3,220,364	+		Pf6N2E2_2729	0.17	-0.5
3,220,364	+		Pf6N2E2_2729	0.17	+0.4
3,220,364	+		Pf6N2E2_2729	0.17	-0.8
3,220,364	+		Pf6N2E2_2729	0.17	-0.6
3,220,365	-		Pf6N2E2_2729	0.17	-1.2
3,220,365	-		Pf6N2E2_2729	0.17	+0.4
3,220,397	+		Pf6N2E2_2729	0.19	+0.4
3,220,397	+		Pf6N2E2_2729	0.19	-0.6
3,220,397	+		Pf6N2E2_2729	0.19	+0.4
3,220,398	-		Pf6N2E2_2729	0.19	-1.2
3,220,398	-		Pf6N2E2_2729	0.19	+0.4
3,220,398	-		Pf6N2E2_2729	0.19	-0.4
3,220,398	-		Pf6N2E2_2729	0.19	-0.2
3,220,398	-		Pf6N2E2_2729	0.19	+0.4
3,220,472	+		Pf6N2E2_2729	0.23	+0.6
3,220,473	-		Pf6N2E2_2729	0.23	+0.4
3,220,473	-		Pf6N2E2_2729	0.23	+0.4
3,220,587	-		Pf6N2E2_2729	0.30	+0.4
3,220,619	-		Pf6N2E2_2729	0.32	+0.4
3,220,752	+		Pf6N2E2_2729	0.40	-1.2
3,220,753	-		Pf6N2E2_2729	0.40	-0.6
3,220,859	+		Pf6N2E2_2729	0.47	-0.6
3,220,859	+		Pf6N2E2_2729	0.47	+0.4
3,220,859	+		Pf6N2E2_2729	0.47	-0.6
3,220,859	+		Pf6N2E2_2729	0.47	+0.4
3,220,859	+		Pf6N2E2_2729	0.47	+0.4
3,220,860	-		Pf6N2E2_2729	0.47	-1.2
3,220,860	-		Pf6N2E2_2729	0.47	+0.4
3,220,860	-		Pf6N2E2_2729	0.47	+0.4
3,220,860	-		Pf6N2E2_2729	0.47	+0.4
3,220,860	-		Pf6N2E2_2729	0.47	-1.2
3,220,860	-		Pf6N2E2_2729	0.47	+0.4
3,220,860	-		Pf6N2E2_2729	0.47	+0.4
3,220,860	-		Pf6N2E2_2729	0.47	-1.6
3,220,887	+		Pf6N2E2_2729	0.48	+0.4
3,220,887	+		Pf6N2E2_2729	0.48	+0.4
3,220,887	+		Pf6N2E2_2729	0.48	+0.4
3,220,888	-		Pf6N2E2_2729	0.48	+0.4
3,220,888	-		Pf6N2E2_2729	0.48	+0.4
3,220,888	-		Pf6N2E2_2729	0.48	+0.4
3,220,888	-		Pf6N2E2_2729	0.48	+0.4
3,220,888	-		Pf6N2E2_2729	0.48	-0.6