Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2535

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,992,680	+		Pf6N2E2_2533	0.64	+0.3
2,992,680	+		Pf6N2E2_2533	0.64	-1.3
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	-0.7
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	+0.3
2,992,681	-		Pf6N2E2_2533	0.64	-1.3
2,992,681	-		Pf6N2E2_2533	0.64	-1.3
2,992,700	-		Pf6N2E2_2533	0.66	+0.3
2,992,761	+		Pf6N2E2_2533	0.73	+0.3
2,992,762	-		Pf6N2E2_2533	0.73	+0.3
2,992,782	+		Pf6N2E2_2533	0.75	-0.7
2,992,962	+				+0.3
2,992,963	-				+0.3
2,992,984	+				+0.3
2,992,984	+				+0.3
2,992,984	+				-0.8
2,992,984	+				-1.3
2,992,985	-				+0.3
2,992,985	-				+0.3
2,992,985	-				-0.7
2,992,985	-				-1.1
2,992,985	-				-0.7
2,992,986	+				+0.3
2,992,986	+				+0.3
2,992,986	+				+0.3
2,992,986	+				+0.3
2,992,986	+				-0.7
2,992,987	-				+0.3
2,993,046	-				-0.9
2,993,046	-				-1.8
2,993,046	-				+0.3
2,993,103	+				-1.0
2,993,124	-				+0.3
2,993,124	-				-0.7
2,993,124	-				+1.3
2,993,124	-				+0.3
2,993,359	+		Pf6N2E2_2534	0.24	-0.7
2,993,360	-		Pf6N2E2_2534	0.25	+0.3
2,993,360	-		Pf6N2E2_2534	0.25	-0.7
2,993,413	+		Pf6N2E2_2534	0.42	+0.3
2,993,413	+		Pf6N2E2_2534	0.42	+0.3
2,993,414	-		Pf6N2E2_2534	0.43	-0.7
2,993,585	+				-0.7
2,993,585	+				+0.3
2,993,585	+				+0.3
2,993,585	+				+0.3
2,993,585	+				-2.3
2,993,585	+				-1.7
2,993,586	-				-0.6
2,993,586	-				+0.3
2,993,770	+		Pf6N2E2_2535	0.33	-0.7
2,993,771	-		Pf6N2E2_2535	0.33	+0.3
2,993,771	-		Pf6N2E2_2535	0.33	+0.3
2,993,818	+		Pf6N2E2_2535	0.42	+0.3
2,993,819	-		Pf6N2E2_2535	0.43	-0.8
2,993,819	-		Pf6N2E2_2535	0.43	-0.7
2,993,894	-		Pf6N2E2_2535	0.57	-0.7
2,993,974	+		Pf6N2E2_2535	0.72	-0.7
2,993,974	+		Pf6N2E2_2535	0.72	-1.3
2,993,974	+		Pf6N2E2_2535	0.72	-1.3
2,993,974	+		Pf6N2E2_2535	0.72	+0.3
2,993,974	+		Pf6N2E2_2535	0.72	-0.7
2,993,975	-		Pf6N2E2_2535	0.73	-1.9
2,993,975	-		Pf6N2E2_2535	0.73	+0.3
2,993,975	-		Pf6N2E2_2535	0.73	+0.3
2,993,975	-		Pf6N2E2_2535	0.73	-2.3
2,993,975	-		Pf6N2E2_2535	0.73	+0.3
2,993,975	-		Pf6N2E2_2535	0.73	-1.3
2,993,975	-		Pf6N2E2_2535	0.73	+0.3
2,994,132	+				+0.3
2,994,133	-				+0.3
2,994,284	-				-0.7
2,994,284	-				-0.7
2,994,303	+				-0.7
2,994,871	-		Pf6N2E2_2536	0.40	+0.3
2,994,941	-		Pf6N2E2_2536	0.45	-0.7