Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2306

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,731,000	+		Pf6N2E2_2305	0.33	-1.7
2,731,000	+		Pf6N2E2_2305	0.33	+0.3
2,731,000	+		Pf6N2E2_2305	0.33	+0.3
2,731,001	-		Pf6N2E2_2305	0.33	+0.3
2,731,001	-		Pf6N2E2_2305	0.33	-1.2
2,731,001	-		Pf6N2E2_2305	0.33	-1.3
2,731,001	-		Pf6N2E2_2305	0.33	+0.3
2,731,001	-		Pf6N2E2_2305	0.33	+0.3
2,731,001	-		Pf6N2E2_2305	0.33	+0.3
2,731,001	-		Pf6N2E2_2305	0.33	+0.3
2,731,001	-		Pf6N2E2_2305	0.33	+0.3
2,731,009	-		Pf6N2E2_2305	0.34	-0.7
2,731,009	-		Pf6N2E2_2305	0.34	+0.3
2,731,096	+		Pf6N2E2_2305	0.40	-0.4
2,731,142	-		Pf6N2E2_2305	0.43	+1.3
2,731,195	+		Pf6N2E2_2305	0.47	+0.3
2,731,196	-		Pf6N2E2_2305	0.47	+0.3
2,731,196	-				-1.7
2,731,196	-		Pf6N2E2_2305	0.47	+0.3
2,731,198	+		Pf6N2E2_2305	0.47	+0.3
2,731,199	-		Pf6N2E2_2305	0.47	-0.7
2,731,199	-		Pf6N2E2_2305	0.47	+0.3
2,731,231	+		Pf6N2E2_2305	0.49	-0.2
2,731,232	-		Pf6N2E2_2305	0.49	-0.7
2,731,279	+		Pf6N2E2_2305	0.53	-0.7
2,731,279	+		Pf6N2E2_2305	0.53	-0.7
2,731,280	-		Pf6N2E2_2305	0.53	+0.3
2,731,280	-		Pf6N2E2_2305	0.53	-0.3
2,731,280	-		Pf6N2E2_2305	0.53	+0.3
2,731,310	-		Pf6N2E2_2305	0.55	-1.0
2,731,478	-				-1.3
2,731,540	+		Pf6N2E2_2305	0.71	-2.0
2,731,565	+		Pf6N2E2_2305	0.73	+0.3
2,731,615	+		Pf6N2E2_2305	0.76	-0.4
2,731,616	-		Pf6N2E2_2305	0.76	+0.3
2,731,712	-		Pf6N2E2_2305	0.83	+0.1
2,731,789	+		Pf6N2E2_2305	0.88	+0.3
2,731,790	-		Pf6N2E2_2305	0.88	+0.3
2,731,790	-		Pf6N2E2_2305	0.88	-1.3
2,731,885	+				-0.2
2,731,885	+				-0.8
2,731,885	+				+0.3
2,731,886	-				-0.7
2,732,138	+		Pf6N2E2_2306	0.29	-1.3
2,732,138	+		Pf6N2E2_2306	0.29	+0.3
2,732,138	+		Pf6N2E2_2306	0.29	-0.7
2,732,138	+		Pf6N2E2_2306	0.29	-0.9
2,732,139	-		Pf6N2E2_2306	0.29	-0.7
2,732,336	+		Pf6N2E2_2306	0.61	+0.3
2,732,337	-		Pf6N2E2_2306	0.61	-0.7
2,732,594	-				-0.5
2,732,594	-				+0.1
2,732,662	-		Pf6N2E2_2307	0.34	+0.3
2,732,793	+				+0.3
2,732,793	+				-0.7
2,732,793	+				-0.3
2,732,794	-				-0.7
2,732,924	-		Pf6N2E2_2308	0.15	+0.3
2,732,924	-		Pf6N2E2_2308	0.15	+0.3
2,733,027	+		Pf6N2E2_2308	0.26	-0.7
2,733,350	+		Pf6N2E2_2308	0.60	-1.3
2,733,385	+		Pf6N2E2_2308	0.64	-0.3
2,733,386	-		Pf6N2E2_2308	0.64	-0.4
2,733,386	-		Pf6N2E2_2308	0.64	-0.4
2,733,390	-		Pf6N2E2_2308	0.64	-0.7
2,733,553	+		Pf6N2E2_2308	0.81	-1.3
2,733,553	+		Pf6N2E2_2308	0.81	+0.7
2,733,553	+		Pf6N2E2_2308	0.81	-0.7
2,733,554	-		Pf6N2E2_2308	0.81	+0.3