Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2121

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,522,285	+		Pf6N2E2_2120	0.56	+0.3
2,522,286	-		Pf6N2E2_2120	0.56	+0.3
2,522,321	-		Pf6N2E2_2120	0.58	-0.7
2,522,410	+		Pf6N2E2_2120	0.62	-2.0
2,522,410	+		Pf6N2E2_2120	0.62	+0.3
2,522,411	-		Pf6N2E2_2120	0.62	+0.3
2,522,411	-		Pf6N2E2_2120	0.62	+1.3
2,522,518	+		Pf6N2E2_2120	0.68	-1.3
2,522,519	-		Pf6N2E2_2120	0.68	+0.3
2,522,584	+		Pf6N2E2_2120	0.71	+0.3
2,522,585	-		Pf6N2E2_2120	0.71	+0.3
2,522,585	-		Pf6N2E2_2120	0.71	-0.7
2,522,854	+		Pf6N2E2_2120	0.85	+0.3
2,522,854	+		Pf6N2E2_2120	0.85	+0.3
2,522,854	+		Pf6N2E2_2120	0.85	-2.0
2,522,854	+		Pf6N2E2_2120	0.85	+0.3
2,522,854	+		Pf6N2E2_2120	0.85	-1.7
2,522,854	+		Pf6N2E2_2120	0.85	+0.3
2,522,854	+		Pf6N2E2_2120	0.85	+0.3
2,522,854	+		Pf6N2E2_2120	0.85	+0.3
2,522,855	-		Pf6N2E2_2120	0.85	+0.3
2,522,855	-		Pf6N2E2_2120	0.85	-1.4
2,522,855	-		Pf6N2E2_2120	0.85	+0.3
2,523,086	+				+0.3
2,523,130	+				+0.3
2,523,131	-				+0.3
2,523,131	-				-1.3
2,523,131	-				+0.3
2,523,262	+		Pf6N2E2_2121	0.29	-2.3
2,523,331	+		Pf6N2E2_2121	0.60	+0.3
2,523,332	-		Pf6N2E2_2121	0.60	+0.3
2,523,378	+		Pf6N2E2_2121	0.81	-0.7
2,523,456	+				+0.3
2,523,456	+				-0.7
2,523,546	+				+0.3
2,523,546	+				-2.3
2,523,546	+				-0.7
2,523,546	+				-0.9
2,523,546	+				-0.2
2,523,546	+				-1.3
2,523,547	-				+0.3
2,523,547	-				+0.3
2,523,633	-				-0.4
2,523,686	+				-1.3
2,523,697	-				+0.3
2,523,781	+				+0.3
2,524,016	+				-0.8
2,524,016	+				+0.3
2,524,016	+				-0.9
2,524,018	+				-0.7
2,524,018	+				+0.3
2,524,093	+				+0.3
2,524,093	+				+0.3
2,524,093	+				-0.7
2,524,093	+				-0.7