Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1779

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,102,362	-		Pf6N2E2_1777	0.57	+0.2
2,102,398	+		Pf6N2E2_1777	0.62	-0.8
2,102,398	+		Pf6N2E2_1777	0.62	-0.8
2,102,399	-		Pf6N2E2_1777	0.62	-0.7
2,102,399	-		Pf6N2E2_1777	0.62	-0.8
2,102,399	-		Pf6N2E2_1777	0.62	-0.8
2,102,403	-		Pf6N2E2_1777	0.62	+0.2
2,102,547	+		Pf6N2E2_1777	0.80	-1.5
2,102,550	+		Pf6N2E2_1777	0.81	+1.8
2,102,551	-		Pf6N2E2_1777	0.81	-0.8
2,102,551	-		Pf6N2E2_1777	0.81	-0.8
2,102,551	-		Pf6N2E2_1777	0.81	+0.2
2,102,559	+		Pf6N2E2_1777	0.82	-0.8
2,102,631	-				+0.2
2,102,786	-		Pf6N2E2_1778	0.16	-0.1
2,102,838	+		Pf6N2E2_1778	0.26	+0.2
2,102,838	+		Pf6N2E2_1778	0.26	-0.4
2,102,839	-		Pf6N2E2_1778	0.26	+0.2
2,102,973	+		Pf6N2E2_1778	0.52	-1.1
2,103,105	-		Pf6N2E2_1778	0.77	-0.5
2,103,174	-				-0.5
2,103,174	-				-0.8
2,103,237	-				+0.2
2,103,250	-				-0.8
2,103,279	-				+0.0
2,103,279	-				-0.2
2,103,279	-				+0.2
2,103,637	-		Pf6N2E2_1779	0.65	-1.2
2,103,703	-		Pf6N2E2_1779	0.78	+0.2
2,103,713	+		Pf6N2E2_1779	0.80	+0.2
2,103,714	-		Pf6N2E2_1779	0.81	-1.4
2,103,714	-		Pf6N2E2_1779	0.81	+0.2
2,103,730	+		Pf6N2E2_1779	0.84	-1.4
2,104,624	-		Pf6N2E2_1780	0.34	-0.8
2,104,624	-		Pf6N2E2_1780	0.34	-1.4
2,104,704	-		Pf6N2E2_1780	0.37	+0.2
2,104,704	-		Pf6N2E2_1780	0.37	-0.5