Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1759

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
2,076,801	-		Pf6N2E2_1757	0.85	-1.4
2,077,037	+				+0.2
2,077,038	-				-0.8
2,077,376	-		Pf6N2E2_1758	0.58	+0.2
2,077,450	-		Pf6N2E2_1758	0.74	+0.2
2,077,558	+				-0.8
2,077,558	+				+0.2
2,077,572	+				+0.2
2,077,867	+		Pf6N2E2_1759	0.48	+0.2
2,077,868	-		Pf6N2E2_1759	0.48	-0.8
2,078,111	-		Pf6N2E2_1759	0.87	-2.0
2,078,261	+				+0.2
2,078,298	-				-0.8
2,078,298	-				+0.2
2,078,417	+		Pf6N2E2_1760	0.13	-1.1
2,078,459	+		Pf6N2E2_1760	0.17	+0.2
2,078,460	-		Pf6N2E2_1760	0.17	+0.2
2,078,537	+		Pf6N2E2_1760	0.24	+0.2
2,078,537	+		Pf6N2E2_1760	0.24	+0.2
2,078,538	-		Pf6N2E2_1760	0.25	-0.8
2,078,584	+		Pf6N2E2_1760	0.29	+0.2
2,078,585	-		Pf6N2E2_1760	0.29	-0.8
2,078,590	+		Pf6N2E2_1760	0.30	-1.5
2,078,741	+		Pf6N2E2_1760	0.45	+0.2
2,078,842	+		Pf6N2E2_1760	0.55	-1.4
2,078,947	+		Pf6N2E2_1760	0.65	-0.8
2,078,947	+		Pf6N2E2_1760	0.65	-0.8
2,078,947	+		Pf6N2E2_1760	0.65	+0.2
2,079,013	+		Pf6N2E2_1760	0.72	-0.4
2,079,025	+		Pf6N2E2_1760	0.73	-2.4