Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1650

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,954,941	-		Pf6N2E2_1649	0.22	+1.1
1,954,949	+		Pf6N2E2_1649	0.22	+0.2
1,955,255	+		Pf6N2E2_1649	0.49	-0.8
1,955,255	+		Pf6N2E2_1649	0.49	+0.2
1,955,255	+		Pf6N2E2_1649	0.49	+0.2
1,955,256	-		Pf6N2E2_1649	0.49	+0.2
1,955,355	-		Pf6N2E2_1649	0.57	+0.2
1,955,355	-		Pf6N2E2_1649	0.57	-0.8
1,955,613	-		Pf6N2E2_1649	0.80	+0.2
1,955,841	+				+0.2
1,955,841	+				+0.2
1,955,841	+				+0.2
1,955,842	-				-0.2
1,955,954	-				-0.8
1,956,031	+		Pf6N2E2_1650	0.13	+0.2
1,956,032	-		Pf6N2E2_1650	0.13	-2.0
1,956,032	-		Pf6N2E2_1650	0.13	+0.2
1,956,032	-		Pf6N2E2_1650	0.13	+0.2
1,956,070	+		Pf6N2E2_1650	0.15	-1.4
1,956,070	+		Pf6N2E2_1650	0.15	-3.8
1,956,071	-		Pf6N2E2_1650	0.15	-3.5
1,956,209	-		Pf6N2E2_1650	0.24	-0.8
1,956,508	+		Pf6N2E2_1650	0.44	+0.2
1,956,508	+		Pf6N2E2_1650	0.44	+0.2
1,956,509	-		Pf6N2E2_1650	0.44	+0.2
1,956,563	-		Pf6N2E2_1650	0.48	+0.2
1,956,563	-		Pf6N2E2_1650	0.48	+0.2
1,956,592	+		Pf6N2E2_1650	0.50	+0.2
1,956,610	+		Pf6N2E2_1650	0.51	+0.2
1,956,611	-		Pf6N2E2_1650	0.51	+0.2
1,957,060	+		Pf6N2E2_1650	0.81	-4.4
1,957,061	-		Pf6N2E2_1650	0.81	+0.2
1,957,063	+		Pf6N2E2_1650	0.81	-2.1
1,957,176	-		Pf6N2E2_1650	0.89	-3.6
1,957,243	+				-2.2
1,957,275	-				+0.2