Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_16

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
45,736	+		Pf6N2E2_15	0.60	-1.2
45,775	+		Pf6N2E2_15	0.62	-1.1
45,776	-		Pf6N2E2_15	0.62	-1.2
45,776	-		Pf6N2E2_15	0.62	+0.3
45,979	+		Pf6N2E2_15	0.75	-1.7
46,139	+		Pf6N2E2_15	0.85	+0.1
46,140	-		Pf6N2E2_15	0.85	-1.7
46,285	-				-0.6
46,348	+				+0.3
46,401	-				-0.1
46,831	-		Pf6N2E2_16	0.76	-2.0
46,914	+				-1.2
46,921	+				-1.2
46,921	+				-0.7
46,921	+				-0.7
46,922	-				+0.3
46,922	-				+0.3
46,922	-				+0.3
46,922	-				-0.7
46,922	-				+0.3
46,924	+				-1.4
46,924	+				-0.7
46,924	+				+0.3
46,927	+				+0.3
46,927	+				-0.7
46,928	-				+0.3
46,928	-				-0.7
47,001	+				-0.1
47,002	-				-1.2
47,070	+				+0.3
47,070	+				-0.0
47,070	+				+0.3
47,070	+				-0.7
47,094	+				+0.3
47,094	+				+0.3
47,094	+				-0.2
47,145	+				-0.7
47,146	-				-1.8
47,193	+				-0.6
47,193	+				-1.2
47,194	-				+0.3
47,194	-				-0.7
47,215	+				-0.4
47,234	+				+0.3
47,234	+				-0.9
47,235	-				+0.3
47,235	-				+0.0
47,235	-				+0.3
47,273	-				+1.3
47,280	+				-0.7
47,281	-				-0.7
47,309	-				+0.3
47,353	-				-0.0
47,370	+				-1.3
47,373	+				-0.8
47,779	+				-0.7
47,792	+				+0.8
47,792	+				-0.7
47,792	+				-0.7
47,793	-				-0.7
47,796	+				+0.3
47,877	+				+0.3
47,904	+				-0.6
47,905	-				+0.3