Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1236

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,448,017	+		Pf6N2E2_1235	0.56	+0.2
1,448,017	+		Pf6N2E2_1235	0.56	+0.2
1,448,017	+		Pf6N2E2_1235	0.56	+0.2
1,448,017	+		Pf6N2E2_1235	0.56	+0.2
1,448,044	+		Pf6N2E2_1235	0.57	+0.2
1,448,107	+		Pf6N2E2_1235	0.62	+0.2
1,448,107	+		Pf6N2E2_1235	0.62	+0.2
1,448,107	+		Pf6N2E2_1235	0.62	-0.8
1,448,108	-		Pf6N2E2_1235	0.62	+0.2
1,448,140	+		Pf6N2E2_1235	0.64	+0.2
1,448,140	+		Pf6N2E2_1235	0.64	-0.8
1,448,140	+		Pf6N2E2_1235	0.64	+0.2
1,448,140	+		Pf6N2E2_1235	0.64	-0.8
1,448,158	+				-1.4
1,448,200	+		Pf6N2E2_1235	0.68	-0.8
1,448,236	+		Pf6N2E2_1235	0.71	+0.2
1,448,236	+		Pf6N2E2_1235	0.71	+0.2
1,448,236	+		Pf6N2E2_1235	0.71	+0.2
1,448,236	+		Pf6N2E2_1235	0.71	+0.8
1,448,237	-		Pf6N2E2_1235	0.71	+0.2
1,448,237	-		Pf6N2E2_1235	0.71	-0.5
1,448,237	-		Pf6N2E2_1235	0.71	+0.2
1,448,237	-		Pf6N2E2_1235	0.71	+0.2
1,448,419	+		Pf6N2E2_1235	0.83	+0.2
1,448,419	+		Pf6N2E2_1235	0.83	+0.2
1,448,458	+		Pf6N2E2_1235	0.86	+0.2
1,448,507	-		Pf6N2E2_1235	0.89	+0.2
1,448,565	-				+0.2
1,448,565	-				+0.2
1,448,664	-				+0.2
1,448,732	-				-1.4
1,448,840	-				-0.8
1,448,856	-				+0.2
1,448,856	-				-0.8
1,448,856	-				-0.8
1,448,868	-				+0.2
1,448,868	-				-0.8
1,448,925	-				-0.8
1,448,928	+				+0.2
1,448,929	-				+0.5
1,448,995	+				+0.2
1,449,163	-		Pf6N2E2_1236	0.18	-0.8
1,449,425	+		Pf6N2E2_1236	0.47	-1.4
1,449,425	+		Pf6N2E2_1236	0.47	+0.2
1,449,426	-		Pf6N2E2_1236	0.47	-1.4
1,449,941	+				-0.6
1,449,942	-				-0.8
1,450,236	-		Pf6N2E2_1237	0.14	-0.8
1,450,236	-		Pf6N2E2_1237	0.14	+0.2
1,450,347	+		Pf6N2E2_1237	0.21	+0.2
1,450,488	+		Pf6N2E2_1237	0.31	+0.2
1,450,489	-		Pf6N2E2_1237	0.31	-1.8
1,450,622	+		Pf6N2E2_1237	0.40	+0.2
1,450,715	+		Pf6N2E2_1237	0.47	+0.2
1,450,715	+		Pf6N2E2_1237	0.47	-0.4
1,450,715	+		Pf6N2E2_1237	0.47	-1.2
1,450,715	+		Pf6N2E2_1237	0.47	+0.2
1,450,715	+		Pf6N2E2_1237	0.47	+0.2
1,450,715	+		Pf6N2E2_1237	0.47	+0.2
1,450,716	-		Pf6N2E2_1237	0.47	+0.2
1,450,716	-		Pf6N2E2_1237	0.47	+0.2
1,450,716	-		Pf6N2E2_1237	0.47	+0.2
1,450,716	-		Pf6N2E2_1237	0.47	+0.2
1,450,716	-		Pf6N2E2_1237	0.47	+0.2
1,450,716	-		Pf6N2E2_1237	0.47	+0.2
1,450,800	+		Pf6N2E2_1237	0.52	-0.8
1,450,873	-		Pf6N2E2_1237	0.57	+0.2