Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1012

Experiment: Ying_all64 rep A; time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_all64 rep A; time point 3
1,181,421	-				+0.2
1,181,460	-				+0.2
1,181,474	+				+0.2
1,181,474	+				+0.2
1,181,553	-				+0.2
1,181,796	+				-0.8
1,181,899	+				+0.2
1,182,119	-				+0.2
1,182,339	+		Pf6N2E2_1012	0.18	-0.8
1,182,386	+		Pf6N2E2_1012	0.39	+0.2
1,182,386	+		Pf6N2E2_1012	0.39	-0.8
1,182,442	+		Pf6N2E2_1012	0.65	+0.2
1,182,442	+		Pf6N2E2_1012	0.65	-0.8
1,182,498	+				+0.2
1,182,498	+				+0.2
1,182,498	+				+0.2
1,182,500	+				+0.2
1,182,500	+				+0.2
1,182,500	+				-3.3
1,182,501	-				+0.2
1,182,501	-				-0.8
1,182,501	-				+0.2
1,182,501	-				+0.2
1,182,501	-				-1.4
1,182,504	+				+0.2
1,182,505	-				+0.2
1,182,544	+				+0.2
1,182,709	+				+0.2
1,182,709	+				-0.8
1,182,709	+				-0.8
1,182,713	+				+0.2
1,182,861	+				+0.2
1,182,861	+				+0.2
1,182,861	+				-0.3
1,182,861	+				-1.3
1,182,896	+				-0.3
1,182,897	-				+0.2
1,182,899	+				-1.8
1,183,031	+		Pf6N2E2_1013	0.12	+0.2
1,183,031	+		Pf6N2E2_1013	0.12	+0.2
1,183,031	+		Pf6N2E2_1013	0.12	+0.2
1,183,032	-		Pf6N2E2_1013	0.12	+0.2
1,183,032	-		Pf6N2E2_1013	0.12	+0.2
1,183,057	-		Pf6N2E2_1013	0.16	+0.2
1,183,114	+		Pf6N2E2_1013	0.22	+0.2
1,183,114	+		Pf6N2E2_1013	0.22	-1.8
1,183,144	+		Pf6N2E2_1013	0.26	-0.8
1,183,144	+		Pf6N2E2_1013	0.26	-0.8
1,183,144	+		Pf6N2E2_1013	0.26	+0.2
1,183,144	+		Pf6N2E2_1013	0.26	-0.8
1,183,144	+		Pf6N2E2_1013	0.26	+0.2
1,183,144	+		Pf6N2E2_1013	0.26	+0.2
1,183,144	+		Pf6N2E2_1013	0.26	-0.8
1,183,144	+		Pf6N2E2_1013	0.26	-0.4
1,183,144	+		Pf6N2E2_1013	0.26	+0.2
1,183,145	-		Pf6N2E2_1013	0.26	-0.8
1,183,145	-		Pf6N2E2_1013	0.26	+0.2
1,183,152	+		Pf6N2E2_1013	0.27	+0.2
1,183,152	+		Pf6N2E2_1013	0.27	-0.8
1,183,153	-		Pf6N2E2_1013	0.27	+0.2
1,183,245	+		Pf6N2E2_1013	0.38	-0.2
1,183,245	+		Pf6N2E2_1013	0.38	-1.4
1,183,297	-		Pf6N2E2_1013	0.45	+0.2
1,183,439	+		Pf6N2E2_1013	0.62	+0.2