Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22350

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,025,675	+		PFLU_RS22340	0.75	+0.6
5,025,675	+		PFLU_RS22340	0.75	-0.0
5,025,675	+		PFLU_RS22340	0.75	-0.2
5,025,675	+		PFLU_RS22340	0.75	-1.1
5,025,675	+		PFLU_RS22340	0.75	-0.1
5,025,675	+		PFLU_RS22340	0.75	-0.4
5,025,675	+		PFLU_RS22340	0.75	+0.6
5,025,675	+		PFLU_RS22340	0.75	+0.2
5,025,675	+		PFLU_RS22340	0.75	-0.4
5,025,676	-		PFLU_RS22340	0.76	-1.7
5,025,676	-		PFLU_RS22340	0.76	+1.8
5,025,676	-		PFLU_RS22340	0.76	+0.6
5,025,676	-		PFLU_RS22340	0.76	-1.2
5,025,676	-		PFLU_RS22340	0.76	+0.3
5,025,676	-		PFLU_RS22340	0.76	-0.5
5,025,676	-		PFLU_RS22340	0.76	-0.7
5,025,676	-		PFLU_RS22340	0.76	+0.2
5,025,771	+		PFLU_RS22340	0.82	-0.1
5,025,771	+		PFLU_RS22340	0.82	+1.2
5,025,771	+		PFLU_RS22340	0.82	-0.6
5,025,771	+		PFLU_RS22340	0.82	-0.7
5,025,771	+		PFLU_RS22340	0.82	-0.3
5,025,771	+		PFLU_RS22340	0.82	-0.9
5,025,771	+		PFLU_RS22340	0.82	+0.8
5,025,771	+		PFLU_RS22340	0.82	-0.4
5,025,772	-		PFLU_RS22340	0.82	-0.7
5,025,772	-		PFLU_RS22340	0.82	+0.4
5,025,772	-		PFLU_RS22340	0.82	-1.2
5,025,772	-		PFLU_RS22340	0.82	-1.5
5,025,772	-		PFLU_RS22340	0.82	-1.6
5,025,772	-		PFLU_RS22340	0.82	-1.8
5,025,849	+		PFLU_RS22340	0.88	-1.5
5,025,849	+		PFLU_RS22340	0.88	+0.6
5,025,849	+		PFLU_RS22340	0.88	-0.8
5,025,849	+		PFLU_RS22340	0.88	-0.3
5,025,849	+		PFLU_RS22340	0.88	-0.7
5,025,849	+		PFLU_RS22340	0.88	-0.2
5,025,849	+		PFLU_RS22340	0.88	+0.1
5,025,849	+		PFLU_RS22340	0.88	-0.1
5,025,849	+		PFLU_RS22340	0.88	-1.8
5,025,849	+		PFLU_RS22340	0.88	-0.6
5,025,849	+		PFLU_RS22340	0.88	-0.9
5,025,849	+		PFLU_RS22340	0.88	-0.4
5,025,850	-		PFLU_RS22340	0.88	-0.6
5,025,850	-		PFLU_RS22340	0.88	-2.3
5,025,850	-		PFLU_RS22340	0.88	+0.4
5,025,850	-		PFLU_RS22340	0.88	-2.5
5,025,888	+				+0.1
5,025,888	+				-1.2
5,025,888	+				+0.3
5,025,888	+				-0.7
5,025,888	+				+1.6
5,025,888	+				-1.2
5,025,888	+				+1.3
5,025,889	-				-1.1
5,025,889	-				+0.1
5,025,889	-				+1.3
5,025,889	-				-1.1
5,025,889	-				-0.1
5,025,889	-				-1.5
5,025,890	+				-1.7
5,025,890	+				-0.9
5,025,890	+				-1.9
5,025,891	-				+0.1
5,025,891	-				+0.2
5,025,891	-				-0.8
5,025,945	+				-0.0
5,025,945	+				+1.6
5,025,945	+				-0.8
5,025,946	-				+0.1
5,025,946	-				-0.4
5,025,946	-				-0.7
5,025,946	-				-0.6
5,026,041	+				-1.5
5,026,041	+				-0.8
5,026,042	-				-1.6
5,026,042	-				-1.1
5,026,042	-				-1.5
5,026,042	-				-1.0
5,026,042	-				+0.6
5,026,054	+				-0.4
5,026,202	+		PFLU_RS22345	0.29	-0.9
5,026,202	+		PFLU_RS22345	0.29	+0.4
5,026,202	+		PFLU_RS22345	0.29	+1.2
5,026,202	+		PFLU_RS22345	0.29	-3.4
5,026,202	+		PFLU_RS22345	0.29	-1.4
5,026,203	-		PFLU_RS22345	0.29	-1.4
5,026,203	-		PFLU_RS22345	0.29	+0.3
5,026,203	-		PFLU_RS22345	0.29	-0.4
5,026,203	-		PFLU_RS22345	0.29	-1.5
5,026,271	+		PFLU_RS22345	0.40	-0.8
5,026,280	+		PFLU_RS22345	0.41	-0.2
5,026,281	-		PFLU_RS22345	0.42	-1.8
5,026,400	+		PFLU_RS22345	0.61	-0.3
5,026,400	+		PFLU_RS22345	0.61	+0.5
5,026,400	+		PFLU_RS22345	0.61	-0.3
5,026,400	+		PFLU_RS22345	0.61	-2.3
5,026,400	+		PFLU_RS22345	0.61	-1.9
5,026,400	+		PFLU_RS22345	0.61	-1.2
5,026,401	-		PFLU_RS22345	0.61	-2.8
5,026,401	-		PFLU_RS22345	0.61	-2.5
5,026,401	-		PFLU_RS22345	0.61	-0.3
5,026,401	-		PFLU_RS22345	0.61	+0.2
5,026,401	-		PFLU_RS22345	0.61	-1.9
5,026,443	-		PFLU_RS22345	0.68	-0.0
5,026,523	+		PFLU_RS22345	0.81	-1.2
5,026,523	+		PFLU_RS22345	0.81	+0.9
5,026,524	-		PFLU_RS22345	0.81	-1.4
5,026,524	-		PFLU_RS22345	0.81	-0.3
5,026,524	-		PFLU_RS22345	0.81	-0.8
5,026,524	-		PFLU_RS22345	0.81	-0.4
5,026,595	+				-2.5
5,026,596	-				-0.0
5,026,596	-				-1.5
5,026,810	+				+0.8
5,026,810	+				+3.2
5,026,810	+				+0.4
5,026,810	+				+1.2
5,026,811	-				+1.3
5,026,811	-				-0.0
5,026,811	-				-0.7
5,026,811	-				-1.9
5,026,811	-				-0.5
5,026,811	-				+0.8
5,026,811	-				-0.2
5,026,811	-				+0.6
5,026,816	+				+0.3
5,026,816	+				-0.6
5,026,817	-				-1.5
5,026,817	-				-1.4
5,026,817	-				-1.2
5,026,817	-				-1.4
5,026,830	+				+0.8
5,026,830	+				-1.2
5,026,830	+				-2.2
5,026,830	+				-1.0
5,026,830	+				-0.5
5,026,831	-				+0.5
5,026,831	-				-2.5
5,026,831	-				+0.7
5,026,831	-				+0.3
5,026,831	-				-0.5
5,026,831	-				-1.9
5,026,831	-				-2.8
5,026,831	-				-0.8
5,026,831	-				-0.2
5,026,846	+				+1.0
5,026,846	+				-0.3
5,026,846	+				-0.3
5,026,846	+				-0.5
5,026,846	+				-0.7
5,026,846	+				-2.7
5,026,846	+				+0.6
5,026,847	-				+1.9
5,026,847	-				-0.9
5,026,847	-				-1.5
5,026,972	+		PFLU_RS22355	0.15	-1.7
5,026,972	+		PFLU_RS22355	0.15	-1.5
5,026,972	+		PFLU_RS22355	0.15	-0.6
5,026,973	-		PFLU_RS22355	0.15	+0.6
5,026,973	-		PFLU_RS22355	0.15	-1.8
5,026,973	-		PFLU_RS22355	0.15	-0.2
5,027,039	-		PFLU_RS22355	0.22	-0.9
5,027,039	-		PFLU_RS22355	0.22	+0.9
5,027,089	+		PFLU_RS22355	0.27	-1.2
5,027,089	+		PFLU_RS22355	0.27	-1.8
5,027,089	+		PFLU_RS22355	0.27	+3.0
5,027,090	-		PFLU_RS22355	0.27	-0.5
5,027,090	-		PFLU_RS22355	0.27	+0.4
5,027,090	-		PFLU_RS22355	0.27	-1.6
5,027,090	-		PFLU_RS22355	0.27	+0.6
5,027,095	+		PFLU_RS22355	0.28	-0.4
5,027,095	+		PFLU_RS22355	0.28	+0.6
5,027,095	+		PFLU_RS22355	0.28	-1.5
5,027,095	+		PFLU_RS22355	0.28	-1.0
5,027,095	+		PFLU_RS22355	0.28	-0.5
5,027,095	+		PFLU_RS22355	0.28	-0.4
5,027,095	+		PFLU_RS22355	0.28	+0.6
5,027,095	+		PFLU_RS22355	0.28	-0.9
5,027,095	+		PFLU_RS22355	0.28	+0.4
5,027,096	-		PFLU_RS22355	0.28	-0.7
5,027,096	-		PFLU_RS22355	0.28	-0.7
5,027,096	-		PFLU_RS22355	0.28	+0.2
5,027,096	-		PFLU_RS22355	0.28	+0.1
5,027,096	-		PFLU_RS22355	0.28	-1.4
5,027,096	-		PFLU_RS22355	0.28	-0.9
5,027,191	-		PFLU_RS22355	0.37	-1.8
5,027,330	-		PFLU_RS22355	0.52	-1.4
5,027,644	+		PFLU_RS22355	0.84	-0.7
5,027,644	+		PFLU_RS22355	0.84	-0.9
5,027,644	+		PFLU_RS22355	0.84	+0.1
5,027,645	-		PFLU_RS22355	0.84	+0.2
5,027,645	-		PFLU_RS22355	0.84	-1.4
5,027,645	-		PFLU_RS22355	0.84	-1.4
5,027,645	-		PFLU_RS22355	0.84	-0.5
5,027,645	-		PFLU_RS22355	0.84	-1.2
5,027,755	+				+0.7
5,027,755	+				-1.1
5,027,755	+				-1.6
5,027,755	+				-0.3
5,027,755	+				-1.1
5,027,755	+				-0.9
5,027,755	+				-1.2
5,027,755	+				-1.5
5,027,756	-				-1.8
5,027,756	-				-0.8
5,027,756	-				-1.0
5,027,756	-				-1.0
5,027,756	-				-2.1
5,027,756	-				-0.6
5,027,756	-				-3.2
5,027,756	-				-1.2
5,027,756	-				-0.8
5,027,756	-				-0.5
5,027,761	+				-0.8
5,027,761	+				-2.1
5,027,761	+				-3.2
5,027,762	-				-1.4
5,027,762	-				-0.2
5,027,762	-				-1.1
5,027,781	+				-1.4
5,027,781	+				-0.6
5,027,781	+				-0.9
5,027,781	+				+0.8
5,027,782	-				-2.1
5,027,782	-				-2.0
5,027,782	-				+0.2
5,027,800	+				+0.6
5,027,800	+				-1.2
5,027,800	+				-0.9
5,027,800	+				-0.2
5,027,801	-				+1.0
5,027,801	-				-0.4
5,027,816	-				-0.9
5,027,816	-				+0.2
5,027,816	-				+1.8
5,027,816	-				+2.3