Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS28585

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
6,359,705	+				-0.0
6,359,705	+				+1.8
6,359,706	-				+1.4
6,359,706	-				-0.2
6,359,707	+				+2.3
6,359,708	-				-0.1
6,359,708	-				-0.1
6,359,749	+				+0.2
6,359,749	+				+2.5
6,359,749	+				-0.9
6,359,749	+				-0.6
6,359,749	+				+1.0
6,359,749	+				-0.9
6,359,749	+				-0.1
6,359,749	+				-0.5
6,359,749	+				-2.3
6,359,749	+				+1.0
6,359,749	+				-2.2
6,359,750	-				-2.5
6,359,750	-				+2.6
6,359,750	-				-1.9
6,359,750	-				+0.8
6,359,750	-				+1.0
6,359,750	-				+1.1
6,359,750	-				-0.6
6,359,750	-				+1.0
6,359,750	-				-0.0
6,359,796	-		PFLU_RS28580	0.18	-0.1
6,359,811	-		PFLU_RS28580	0.21	+1.5
6,359,860	+		PFLU_RS28580	0.29	-1.7
6,359,861	-		PFLU_RS28580	0.30	+0.4
6,359,861	-		PFLU_RS28580	0.30	-0.3
6,359,897	+		PFLU_RS28580	0.36	-0.2
6,359,914	+		PFLU_RS28580	0.39	-0.9
6,359,914	+		PFLU_RS28580	0.39	+1.4
6,359,914	+		PFLU_RS28580	0.39	+0.3
6,359,914	+		PFLU_RS28580	0.39	-2.0
6,359,914	+		PFLU_RS28580	0.39	-0.1
6,359,914	+		PFLU_RS28580	0.39	+0.8
6,359,914	+		PFLU_RS28580	0.39	+1.6
6,359,914	+		PFLU_RS28580	0.39	+1.2
6,359,914	+		PFLU_RS28580	0.39	-0.4
6,359,914	+		PFLU_RS28580	0.39	+1.5
6,359,914	+		PFLU_RS28580	0.39	-0.6
6,359,914	+		PFLU_RS28580	0.39	+0.7
6,359,914	+		PFLU_RS28580	0.39	-0.8
6,359,915	-		PFLU_RS28580	0.39	+0.9
6,359,915	-		PFLU_RS28580	0.39	-1.2
6,359,915	-		PFLU_RS28580	0.39	+0.5
6,359,915	-		PFLU_RS28580	0.39	+0.6
6,359,915	-		PFLU_RS28580	0.39	+1.5
6,359,915	-		PFLU_RS28580	0.39	+1.6
6,359,915	-		PFLU_RS28580	0.39	+0.8
6,359,951	+		PFLU_RS28580	0.46	+0.9
6,359,951	+		PFLU_RS28580	0.46	+0.6
6,359,951	+		PFLU_RS28580	0.46	-1.6
6,359,952	-		PFLU_RS28580	0.46	+2.2
6,359,952	-		PFLU_RS28580	0.46	-1.4
6,359,952	-		PFLU_RS28580	0.46	+1.2
6,359,952	-		PFLU_RS28580	0.46	+1.2
6,359,972	+		PFLU_RS28580	0.49	+1.4
6,359,972	+		PFLU_RS28580	0.49	+1.3
6,359,973	-		PFLU_RS28580	0.49	+1.2
6,359,973	-		PFLU_RS28580	0.49	-2.0
6,359,973	-		PFLU_RS28580	0.49	+0.7
6,359,973	-		PFLU_RS28580	0.49	-0.5
6,359,973	-		PFLU_RS28580	0.49	-1.7
6,359,973	-		PFLU_RS28580	0.49	+0.7
6,359,973	-		PFLU_RS28580	0.49	+0.7
6,359,973	-		PFLU_RS28580	0.49	-0.9
6,359,973	-		PFLU_RS28580	0.49	+1.5
6,359,973	-		PFLU_RS28580	0.49	+1.8
6,359,973	-		PFLU_RS28580	0.49	-0.1
6,359,973	-		PFLU_RS28580	0.49	+1.4
6,359,978	+		PFLU_RS28580	0.50	-2.1
6,359,978	+		PFLU_RS28580	0.50	+1.1
6,359,978	+		PFLU_RS28580	0.50	+0.8
6,359,978	+		PFLU_RS28580	0.50	-2.8
6,359,978	+		PFLU_RS28580	0.50	+1.4
6,359,978	+		PFLU_RS28580	0.50	+0.4
6,359,978	+		PFLU_RS28580	0.50	-1.1
6,359,978	+		PFLU_RS28580	0.50	-0.1
6,359,978	+		PFLU_RS28580	0.50	-1.6
6,359,978	+		PFLU_RS28580	0.50	+0.3
6,359,978	+		PFLU_RS28580	0.50	+0.8
6,359,978	+		PFLU_RS28580	0.50	+0.3
6,359,978	+		PFLU_RS28580	0.50	-3.1
6,359,978	+		PFLU_RS28580	0.50	-1.3
6,359,978	+		PFLU_RS28580	0.50	-2.3
6,359,978	+		PFLU_RS28580	0.50	+2.3
6,359,978	+		PFLU_RS28580	0.50	+1.3
6,359,978	+		PFLU_RS28580	0.50	+2.0
6,359,978	+		PFLU_RS28580	0.50	+1.4
6,359,978	+		PFLU_RS28580	0.50	-2.1
6,359,978	+		PFLU_RS28580	0.50	-1.3
6,359,978	+		PFLU_RS28580	0.50	-1.3
6,359,978	+		PFLU_RS28580	0.50	-0.9
6,359,978	+		PFLU_RS28580	0.50	+2.6
6,359,978	+		PFLU_RS28580	0.50	-0.9
6,359,978	+		PFLU_RS28580	0.50	-0.8
6,359,978	+		PFLU_RS28580	0.50	+1.9
6,359,978	+		PFLU_RS28580	0.50	+2.0
6,359,978	+		PFLU_RS28580	0.50	+0.5
6,359,978	+		PFLU_RS28580	0.50	-1.5
6,359,978	+		PFLU_RS28580	0.50	-0.3
6,359,978	+		PFLU_RS28580	0.50	-1.1
6,359,978	+		PFLU_RS28580	0.50	+1.8
6,359,978	+		PFLU_RS28580	0.50	+1.3
6,359,978	+		PFLU_RS28580	0.50	+0.1
6,359,978	+		PFLU_RS28580	0.50	-0.2
6,359,978	+		PFLU_RS28580	0.50	-2.3
6,359,978	+		PFLU_RS28580	0.50	-1.2
6,359,978	+		PFLU_RS28580	0.50	-0.9
6,359,978	+		PFLU_RS28580	0.50	-1.6
6,359,978	+		PFLU_RS28580	0.50	-1.8
6,359,978	+		PFLU_RS28580	0.50	+0.7
6,359,979	-		PFLU_RS28580	0.51	+1.8
6,359,979	-		PFLU_RS28580	0.51	+0.4
6,359,979	-		PFLU_RS28580	0.51	+0.8
6,359,979	-		PFLU_RS28580	0.51	-1.5
6,359,979	-		PFLU_RS28580	0.51	+0.9
6,359,979	-		PFLU_RS28580	0.51	+0.3
6,359,979	-		PFLU_RS28580	0.51	+0.1
6,359,979	-		PFLU_RS28580	0.51	-0.7
6,359,979	-		PFLU_RS28580	0.51	-1.6
6,359,979	-		PFLU_RS28580	0.51	+1.2
6,359,979	-		PFLU_RS28580	0.51	+1.1
6,359,979	-		PFLU_RS28580	0.51	-0.7
6,359,979	-		PFLU_RS28580	0.51	+2.5
6,359,979	-		PFLU_RS28580	0.51	-0.4
6,359,979	-		PFLU_RS28580	0.51	-0.1
6,359,979	-		PFLU_RS28580	0.51	-0.5
6,359,979	-		PFLU_RS28580	0.51	+0.2
6,359,979	-		PFLU_RS28580	0.51	+2.2
6,359,979	-		PFLU_RS28580	0.51	-2.7
6,359,979	-		PFLU_RS28580	0.51	+1.2
6,359,979	-		PFLU_RS28580	0.51	-0.8
6,359,979	-		PFLU_RS28580	0.51	-1.4
6,359,979	-		PFLU_RS28580	0.51	+1.1
6,359,979	-		PFLU_RS28580	0.51	+1.0
6,359,979	-		PFLU_RS28580	0.51	+0.8
6,359,979	-		PFLU_RS28580	0.51	+1.1
6,359,979	-		PFLU_RS28580	0.51	-0.2
6,359,979	-		PFLU_RS28580	0.51	+0.7
6,359,979	-		PFLU_RS28580	0.51	-1.5
6,359,979	-		PFLU_RS28580	0.51	-1.9
6,359,979	-		PFLU_RS28580	0.51	-0.3
6,359,979	-		PFLU_RS28580	0.51	-0.2
6,359,979	-		PFLU_RS28580	0.51	+0.8
6,359,979	-		PFLU_RS28580	0.51	+1.5
6,359,979	-		PFLU_RS28580	0.51	-1.3
6,359,979	-		PFLU_RS28580	0.51	+2.3
6,359,979	-		PFLU_RS28580	0.51	-1.0
6,359,979	-		PFLU_RS28580	0.51	+0.6
6,359,979	-		PFLU_RS28580	0.51	-2.4
6,359,979	-		PFLU_RS28580	0.51	-1.3
6,359,980	+		PFLU_RS28580	0.51	+0.3
6,359,980	+		PFLU_RS28580	0.51	+0.5
6,359,980	+		PFLU_RS28580	0.51	-0.7
6,359,980	+		PFLU_RS28580	0.51	+1.9
6,359,980	+		PFLU_RS28580	0.51	+0.7
6,359,980	+		PFLU_RS28580	0.51	-2.0
6,359,980	+		PFLU_RS28580	0.51	-2.7
6,359,980	+		PFLU_RS28580	0.51	-1.1
6,359,980	+		PFLU_RS28580	0.51	-1.4
6,359,980	+		PFLU_RS28580	0.51	+0.8
6,359,980	+		PFLU_RS28580	0.51	+2.0
6,359,980	+		PFLU_RS28580	0.51	+0.5
6,359,981	-		PFLU_RS28580	0.51	-0.8
6,359,981	-		PFLU_RS28580	0.51	-0.5
6,359,981	-		PFLU_RS28580	0.51	-1.9
6,359,981	-		PFLU_RS28580	0.51	+1.3
6,359,981	-		PFLU_RS28580	0.51	-0.6
6,359,981	-		PFLU_RS28580	0.51	+1.2
6,359,981	-		PFLU_RS28580	0.51	-0.4
6,359,981	-		PFLU_RS28580	0.51	+0.2
6,359,981	-		PFLU_RS28580	0.51	+1.4
6,359,981	-		PFLU_RS28580	0.51	-0.3
6,359,981	-		PFLU_RS28580	0.51	-1.7
6,359,981	-		PFLU_RS28580	0.51	-0.2
6,359,981	-		PFLU_RS28580	0.51	-0.1
6,360,014	+		PFLU_RS28580	0.57	+1.3
6,360,025	+		PFLU_RS28580	0.59	+1.1
6,360,065	+		PFLU_RS28580	0.66	+1.3
6,360,066	-		PFLU_RS28580	0.66	+1.3
6,360,066	-		PFLU_RS28580	0.66	-1.0
6,360,080	+		PFLU_RS28580	0.68	-1.4
6,360,080	+		PFLU_RS28580	0.68	-0.4
6,360,080	+		PFLU_RS28580	0.68	-2.8
6,360,081	-		PFLU_RS28580	0.69	-0.6
6,360,081	-		PFLU_RS28580	0.69	-0.1
6,360,081	-		PFLU_RS28580	0.69	+1.3
6,360,081	-		PFLU_RS28580	0.69	+0.1
6,360,081	-		PFLU_RS28580	0.69	-2.8
6,360,129	-		PFLU_RS28580	0.77	-1.5
6,360,129	-		PFLU_RS28580	0.77	-2.0
6,360,129	-		PFLU_RS28580	0.77	+1.9
6,360,140	-		PFLU_RS28580	0.79	+0.8
6,360,149	+		PFLU_RS28580	0.81	+0.5
6,360,149	+		PFLU_RS28580	0.81	+0.4
6,360,149	+		PFLU_RS28580	0.81	+1.2
6,360,149	+		PFLU_RS28580	0.81	+1.8
6,360,150	-		PFLU_RS28580	0.81	-2.7
6,360,150	-		PFLU_RS28580	0.81	-1.6
6,360,150	-		PFLU_RS28580	0.81	+1.8
6,360,150	-		PFLU_RS28580	0.81	-1.4
6,360,150	-		PFLU_RS28580	0.81	-2.2
6,360,150	-		PFLU_RS28580	0.81	+2.3
6,360,150	-		PFLU_RS28580	0.81	+0.9
6,360,150	-		PFLU_RS28580	0.81	-1.9
6,360,203	+				+1.4
6,360,203	+				+1.7
6,360,203	+				+0.7
6,360,204	-				-0.6
6,360,220	+				-1.6
6,360,220	+				+0.6
6,360,220	+				+0.6
6,360,220	+				+1.5
6,360,220	+				+0.7
6,360,221	-				+1.6
6,360,221	-				+0.2
6,360,221	-				+1.0
6,360,221	-				-0.9
6,360,221	-				+1.7
6,360,221	-				+1.2
6,360,221	-				+0.1
6,360,246	+				+1.6
6,360,246	+				-0.3
6,360,247	-				-1.6
6,360,250	+				-0.9
6,360,250	+				+1.7
6,360,250	+				-1.2
6,360,250	+				+2.0
6,360,250	+				+1.4
6,360,251	-				+2.0
6,360,251	-				-0.5
6,360,251	-				+1.8
6,360,251	-				-0.6
6,360,251	-				-1.9
6,360,251	-				-2.5
6,360,251	-				-0.2
6,360,272	+				-0.2
6,360,273	-				-2.4
6,360,273	-				-0.6
6,360,306	+				-1.3
6,360,306	+				+0.4
6,360,306	+				-2.1
6,360,306	+				-0.8
6,360,306	+				+1.2
6,360,307	-				-1.0
6,360,307	-				-0.8
6,360,307	-				+1.9
6,360,307	-				-1.2
6,360,307	-				+0.2
6,360,313	+				+2.5
6,360,313	+				+0.1
6,360,313	+				-1.1
6,360,313	+				-2.5
6,360,313	+				+2.6
6,360,313	+				+0.5
6,360,314	-				+0.4
6,360,314	-				+1.8
6,360,314	-				-2.5
6,360,346	+				+0.1
6,360,346	+				-3.1
6,360,346	+				-0.0
6,360,346	+				-0.6
6,360,347	-				+0.1
6,360,347	-				-1.2
6,360,347	-				-0.9
6,360,347	-				+0.4
6,360,347	-				-3.6
6,360,347	-				+0.4
6,360,347	-				+2.6
6,360,347	-				-0.5
6,360,347	-				+0.9
6,360,370	+				-2.0
6,360,370	+				-2.8
6,360,370	+				-0.4
6,360,371	-				-0.9
6,360,371	-				-1.2
6,360,453	+				-2.8
6,360,453	+				-2.1
6,360,453	+				-0.6
6,360,453	+				+0.7
6,360,454	-				+0.7
6,360,454	-				-1.3
6,360,565	+		PFLU_RS28585	0.30	-1.3
6,360,565	+		PFLU_RS28585	0.30	+2.6
6,360,576	-		PFLU_RS28585	0.32	+0.2
6,360,604	+		PFLU_RS28585	0.37	-1.4
6,360,604	+		PFLU_RS28585	0.37	+1.4
6,360,604	+		PFLU_RS28585	0.37	+2.6
6,360,604	+		PFLU_RS28585	0.37	-2.3
6,360,604	+		PFLU_RS28585	0.37	-1.6
6,360,605	-		PFLU_RS28585	0.37	+0.4
6,360,607	+		PFLU_RS28585	0.38	-2.0
6,360,607	+		PFLU_RS28585	0.38	-3.2
6,360,608	-		PFLU_RS28585	0.38	+0.7
6,360,631	+		PFLU_RS28585	0.42	+1.5
6,360,631	+		PFLU_RS28585	0.42	+3.3
6,360,631	+		PFLU_RS28585	0.42	+1.1
6,360,631	+		PFLU_RS28585	0.42	+0.3
6,360,631	+		PFLU_RS28585	0.42	+1.2
6,360,632	-		PFLU_RS28585	0.42	-2.7
6,360,645	+		PFLU_RS28585	0.45	+1.0
6,360,646	-		PFLU_RS28585	0.45	+2.1
6,360,646	-		PFLU_RS28585	0.45	+1.4
6,360,653	-		PFLU_RS28585	0.46	-0.2
6,360,696	+		PFLU_RS28585	0.54	+0.4
6,360,696	+		PFLU_RS28585	0.54	+0.9
6,360,696	+		PFLU_RS28585	0.54	+0.1
6,360,696	+		PFLU_RS28585	0.54	+2.0
6,360,696	+		PFLU_RS28585	0.54	-1.1
6,360,697	-		PFLU_RS28585	0.54	-2.5
6,360,697	-		PFLU_RS28585	0.54	-1.5
6,360,700	+		PFLU_RS28585	0.55	-2.5
6,360,701	-		PFLU_RS28585	0.55	-1.5
6,360,701	-		PFLU_RS28585	0.55	-1.8
6,360,886	+		PFLU_RS28585	0.88	+1.2
6,360,886	+		PFLU_RS28585	0.88	-0.6
6,360,886	+		PFLU_RS28585	0.88	+1.6
6,360,886	+		PFLU_RS28585	0.88	+1.3
6,360,887	-		PFLU_RS28585	0.88	-2.3
6,360,887	-		PFLU_RS28585	0.88	-3.3
6,360,887	-		PFLU_RS28585	0.88	+0.6
6,360,887	-		PFLU_RS28585	0.88	-1.2
6,360,901	+				+0.4
6,360,910	+				-0.2
6,360,910	+				-2.2
6,360,910	+				-1.1
6,360,910	+				-0.1
6,360,910	+				-2.0
6,360,910	+				-0.2
6,360,910	+				+3.2
6,360,910	+				-1.7
6,360,910	+				-0.6
6,360,910	+				-2.9
6,360,911	-				+0.5
6,360,911	-				+1.7
6,360,911	-				+0.6
6,360,911	-				+0.0
6,360,911	-				+0.5
6,360,911	-				-0.4
6,360,911	-				+0.2
6,360,911	-				-2.7
6,360,911	-				+0.3
6,360,976	+				-1.9
6,360,977	-				+1.9
6,360,977	-				-0.5
6,360,977	-				-2.3
6,361,092	+		PFLU_RS28590	0.13	-1.5
6,361,092	+		PFLU_RS28590	0.13	+1.0
6,361,093	-		PFLU_RS28590	0.13	-1.1
6,361,206	+		PFLU_RS28590	0.23	+0.4
6,361,207	-		PFLU_RS28590	0.23	-1.5
6,361,207	-		PFLU_RS28590	0.23	-1.5
6,361,350	+		PFLU_RS28590	0.35	-0.6
6,361,351	-		PFLU_RS28590	0.35	-0.8
6,361,482	+		PFLU_RS28590	0.47	+0.3
6,361,483	-		PFLU_RS28590	0.47	-1.3
6,361,581	+		PFLU_RS28590	0.56	-0.4
6,361,581	+		PFLU_RS28590	0.56	+1.4
6,361,581	+		PFLU_RS28590	0.56	+0.2
6,361,581	+		PFLU_RS28590	0.56	+1.5
6,361,581	+		PFLU_RS28590	0.56	-0.3
6,361,581	+		PFLU_RS28590	0.56	-2.9
6,361,582	-		PFLU_RS28590	0.56	-0.2
6,361,582	-		PFLU_RS28590	0.56	+0.5
6,361,611	+		PFLU_RS28590	0.58	+0.5
6,361,611	+		PFLU_RS28590	0.58	-1.6
6,361,611	+		PFLU_RS28590	0.58	-2.3
6,361,611	+		PFLU_RS28590	0.58	+2.7
6,361,611	+		PFLU_RS28590	0.58	-1.4
6,361,611	+		PFLU_RS28590	0.58	-2.4
6,361,611	+		PFLU_RS28590	0.58	+1.4
6,361,612	-		PFLU_RS28590	0.58	-2.6
6,361,612	-		PFLU_RS28590	0.58	-1.5
6,361,644	+		PFLU_RS28590	0.61	-2.8
6,361,644	+		PFLU_RS28590	0.61	+0.3
6,361,644	+		PFLU_RS28590	0.61	-0.5
6,361,644	+		PFLU_RS28590	0.61	-0.5
6,361,704	+		PFLU_RS28590	0.66	+1.0
6,361,706	+		PFLU_RS28590	0.67	+1.8
6,361,706	+		PFLU_RS28590	0.67	+1.9
6,361,706	+		PFLU_RS28590	0.67	+2.0
6,361,706	+		PFLU_RS28590	0.67	-2.8
6,361,706	+		PFLU_RS28590	0.67	+0.1
6,361,706	+		PFLU_RS28590	0.67	+0.9
6,361,706	+		PFLU_RS28590	0.67	-2.8
6,361,706	+		PFLU_RS28590	0.67	+0.2
6,361,706	+		PFLU_RS28590	0.67	-0.2
6,361,706	+		PFLU_RS28590	0.67	-0.2
6,361,707	-		PFLU_RS28590	0.67	+1.7
6,361,707	-		PFLU_RS28590	0.67	-1.8
6,361,707	-		PFLU_RS28590	0.67	+0.4
6,361,707	-		PFLU_RS28590	0.67	+0.0
6,361,707	-		PFLU_RS28590	0.67	-1.1
6,361,707	-		PFLU_RS28590	0.67	-2.2
6,361,707	-		PFLU_RS28590	0.67	+1.0
6,361,707	-		PFLU_RS28590	0.67	-0.2
6,361,707	-		PFLU_RS28590	0.67	-1.4
6,361,707	-		PFLU_RS28590	0.67	-1.3
6,361,707	-		PFLU_RS28590	0.67	+1.7
6,361,707	-		PFLU_RS28590	0.67	+0.2
6,361,707	-		PFLU_RS28590	0.67	-2.6
6,361,707	-		PFLU_RS28590	0.67	+2.9
6,361,707	-		PFLU_RS28590	0.67	+2.2
6,361,821	+		PFLU_RS28590	0.77	+0.2
6,361,821	+		PFLU_RS28590	0.77	-1.8
6,361,821	+		PFLU_RS28590	0.77	+1.6
6,361,821	+		PFLU_RS28590	0.77	-1.7
6,361,821	+		PFLU_RS28590	0.77	+0.1
6,361,876	+		PFLU_RS28590	0.82	-0.2