Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20795

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
4,675,835	-		PFLU_RS20785	0.66	-2.0
4,675,862	+		PFLU_RS20785	0.69	+2.9
4,675,863	-		PFLU_RS20785	0.69	+0.8
4,676,004	+		PFLU_RS20785	0.84	-1.0
4,676,004	+		PFLU_RS20785	0.84	-1.0
4,676,005	-		PFLU_RS20785	0.84	-2.3
4,676,023	+		PFLU_RS20785	0.86	-2.1
4,676,023	+		PFLU_RS20785	0.86	+1.0
4,676,023	+		PFLU_RS20785	0.86	+5.4
4,676,023	+		PFLU_RS20785	0.86	+2.0
4,676,023	+		PFLU_RS20785	0.86	-0.0
4,676,024	-		PFLU_RS20785	0.86	-1.8
4,676,024	-		PFLU_RS20785	0.86	-0.3
4,676,024	-		PFLU_RS20785	0.86	-2.2
4,676,024	-		PFLU_RS20785	0.86	-0.1
4,676,024	-		PFLU_RS20785	0.86	-0.6
4,676,024	-		PFLU_RS20785	0.86	+1.5
4,676,123	-				+0.5
4,676,164	+				+2.2
4,676,165	-				+1.0
4,676,246	+				-0.6
4,676,246	+				-1.5
4,676,246	+				-1.5
4,676,246	+				+1.2
4,676,246	+				-1.1
4,676,246	+				-0.1
4,676,247	-				-0.9
4,676,247	-				-1.6
4,676,247	-				+2.0
4,676,247	-				+0.8
4,676,251	+				-2.4
4,676,251	+				-3.0
4,676,251	+				-1.4
4,676,251	+				+2.2
4,676,251	+				-1.8
4,676,251	+				-0.0
4,676,251	+				-1.5
4,676,251	+				-0.3
4,676,251	+				-0.9
4,676,251	+				-2.7
4,676,251	+				-0.2
4,676,251	+				+0.4
4,676,251	+				-2.9
4,676,251	+				+0.4
4,676,251	+				-1.7
4,676,252	-				+1.0
4,676,252	-				+0.9
4,676,252	-				+0.2
4,676,252	-				-1.2
4,676,252	-				+0.6
4,676,252	-				-2.4
4,676,252	-				+0.3
4,676,252	-				-1.5
4,676,252	-				+2.5
4,676,469	+		PFLU_RS20790	0.42	+1.2
4,676,514	-		PFLU_RS20790	0.51	-1.2
4,676,514	-		PFLU_RS20790	0.51	-0.3
4,676,514	-		PFLU_RS20790	0.51	+1.7
4,676,562	+		PFLU_RS20790	0.61	-0.0
4,676,573	+		PFLU_RS20790	0.63	+2.9
4,676,681	+		PFLU_RS20790	0.85	-0.2
4,676,681	+		PFLU_RS20790	0.85	+1.2
4,676,681	+		PFLU_RS20790	0.85	+2.4
4,676,681	+		PFLU_RS20790	0.85	-1.3
4,676,687	+		PFLU_RS20790	0.87	-1.3
4,676,735	+				-1.3
4,676,735	+				-1.0
4,676,735	+				+3.1
4,676,736	-				-0.6
4,676,749	+				-2.1
4,676,750	-				+1.2
4,676,750	-				+0.4
4,676,750	-				-1.0
4,676,750	-				+2.2
4,676,775	+				+1.7
4,676,776	-				-2.5
4,676,776	-				-1.5
4,676,829	-				+1.2
4,676,867	+				+1.8
4,676,867	+				-1.3
4,676,867	+				+1.6
4,676,868	-				-0.3
4,676,868	-				-1.5
4,676,868	-				+3.2
4,676,868	-				+0.0
4,676,868	-				+1.1
4,676,871	+				-1.2
4,676,871	+				+2.3
4,676,871	+				-2.2
4,676,871	+				-2.0
4,676,872	-				+1.7
4,676,872	-				+2.8
4,676,872	-				+3.1
4,676,872	-				-1.6
4,676,872	-				-2.1
4,676,872	-				-1.7
4,676,872	-				-1.3
4,676,882	+				-1.3
4,676,882	+				+0.9
4,676,882	+				+1.5
4,676,882	+				-1.2
4,676,883	-				-1.6
4,676,883	-				-2.7
4,676,883	-				-2.2
4,676,883	-				+0.7
4,676,883	-				+2.2
4,676,883	-				+0.6
4,676,883	-				+0.5
4,676,948	+				-0.3
4,676,948	+				-2.2
4,676,948	+				+1.5
4,676,948	+				-0.7
4,676,948	+				-1.3
4,676,948	+				-2.2
4,676,948	+				-0.8
4,676,948	+				-0.6
4,676,948	+				+1.6
4,676,949	-				-0.0
4,676,949	-				-1.7
4,676,949	-				-2.1
4,676,949	-				+1.6
4,676,949	-				-0.6
4,676,949	-				-1.6
4,676,949	-				+1.5
4,676,949	-				-0.2
4,676,949	-				+1.4
4,676,949	-				-1.7
4,676,949	-				-0.0
4,676,956	+				+1.3
4,676,956	+				-0.3
4,676,956	+				-1.3
4,676,956	+				+0.7
4,676,956	+				+2.1
4,676,957	-				-0.8
4,676,957	-				-2.0
4,676,957	-				+0.6
4,676,957	-				-0.1
4,677,156	-		PFLU_RS20795	0.23	+2.0
4,677,273	+		PFLU_RS20795	0.31	-0.2
4,677,273	+		PFLU_RS20795	0.31	+0.6
4,677,273	+		PFLU_RS20795	0.31	-1.2
4,677,273	+		PFLU_RS20795	0.31	+0.5
4,677,273	+		PFLU_RS20795	0.31	-2.1
4,677,273	+		PFLU_RS20795	0.31	-2.5
4,677,273	+		PFLU_RS20795	0.31	+0.9
4,677,273	+		PFLU_RS20795	0.31	+0.1
4,677,274	-		PFLU_RS20795	0.31	-3.2
4,677,274	-		PFLU_RS20795	0.31	-1.5
4,677,274	-		PFLU_RS20795	0.31	+1.2
4,677,301	+		PFLU_RS20795	0.32	+0.8
4,677,301	+		PFLU_RS20795	0.32	+0.4
4,677,301	+		PFLU_RS20795	0.32	+1.4
4,677,301	+		PFLU_RS20795	0.32	-2.1
4,677,301	+		PFLU_RS20795	0.32	-2.3
4,677,301	+		PFLU_RS20795	0.32	+1.0
4,677,301	+		PFLU_RS20795	0.32	+1.7
4,677,301	+		PFLU_RS20795	0.32	-2.5
4,677,301	+		PFLU_RS20795	0.32	-2.1
4,677,301	+		PFLU_RS20795	0.32	+1.5
4,677,302	-		PFLU_RS20795	0.33	-0.6
4,677,302	-		PFLU_RS20795	0.33	+1.1
4,677,302	-		PFLU_RS20795	0.33	+0.4
4,677,302	-		PFLU_RS20795	0.33	+0.4
4,677,302	-		PFLU_RS20795	0.33	+1.4
4,677,302	-		PFLU_RS20795	0.33	-0.5
4,677,302	-		PFLU_RS20795	0.33	-1.8
4,677,302	-		PFLU_RS20795	0.33	+0.4
4,677,302	-		PFLU_RS20795	0.33	-1.2
4,677,303	+		PFLU_RS20795	0.33	-1.7
4,677,303	+		PFLU_RS20795	0.33	+0.4
4,677,303	+		PFLU_RS20795	0.33	+0.6
4,677,303	+		PFLU_RS20795	0.33	+1.1
4,677,304	-		PFLU_RS20795	0.33	+0.8
4,677,323	+		PFLU_RS20795	0.34	+1.0
4,677,323	+		PFLU_RS20795	0.34	-0.1
4,677,323	+		PFLU_RS20795	0.34	+1.2
4,677,324	-		PFLU_RS20795	0.34	+1.1
4,677,447	-		PFLU_RS20795	0.42	+0.4
4,677,475	-		PFLU_RS20795	0.44	-0.6
4,677,603	-		PFLU_RS20795	0.52	+0.6
4,677,615	-		PFLU_RS20795	0.53	-0.2
4,677,615	-		PFLU_RS20795	0.53	-1.7
4,677,620	-		PFLU_RS20795	0.54	+0.4
4,677,620	-		PFLU_RS20795	0.54	+0.6
4,677,620	-		PFLU_RS20795	0.54	+1.3
4,677,665	+		PFLU_RS20795	0.57	-2.0
4,677,689	+		PFLU_RS20795	0.58	-1.3
4,677,749	+		PFLU_RS20795	0.62	-1.7
4,677,749	+		PFLU_RS20795	0.62	-1.8
4,677,749	+		PFLU_RS20795	0.62	+1.0
4,677,749	+		PFLU_RS20795	0.62	-2.1
4,677,749	+		PFLU_RS20795	0.62	+0.7
4,677,749	+		PFLU_RS20795	0.62	-1.0
4,677,749	+		PFLU_RS20795	0.62	-1.7
4,677,749	+		PFLU_RS20795	0.62	-1.9
4,677,749	+		PFLU_RS20795	0.62	-1.5
4,677,749	+		PFLU_RS20795	0.62	+0.3
4,677,749	+		PFLU_RS20795	0.62	-1.9
4,677,749	+		PFLU_RS20795	0.62	+0.5
4,677,749	+		PFLU_RS20795	0.62	-0.3
4,677,750	-		PFLU_RS20795	0.62	-0.5
4,677,750	-		PFLU_RS20795	0.62	-1.5
4,677,750	-		PFLU_RS20795	0.62	-0.8
4,677,750	-		PFLU_RS20795	0.62	-0.0
4,677,750	-		PFLU_RS20795	0.62	-2.5
4,677,750	-		PFLU_RS20795	0.62	-2.7
4,677,750	-		PFLU_RS20795	0.62	-0.8
4,677,750	-		PFLU_RS20795	0.62	-1.9
4,677,750	-		PFLU_RS20795	0.62	+2.0
4,677,750	-		PFLU_RS20795	0.62	-0.6
4,677,753	+		PFLU_RS20795	0.62	-2.5
4,677,770	-		PFLU_RS20795	0.63	+2.0
4,677,770	-		PFLU_RS20795	0.63	+1.2
4,677,807	-		PFLU_RS20795	0.66	+1.0
4,677,807	-		PFLU_RS20795	0.66	+0.1
4,677,807	-		PFLU_RS20795	0.66	+0.4
4,677,807	-		PFLU_RS20795	0.66	-0.8
4,677,828	+		PFLU_RS20795	0.67	-1.5
4,677,828	+		PFLU_RS20795	0.67	-1.8
4,677,828	+		PFLU_RS20795	0.67	-0.6
4,677,828	+		PFLU_RS20795	0.67	-0.9
4,677,829	-		PFLU_RS20795	0.67	-2.6
4,677,829	-		PFLU_RS20795	0.67	+0.4
4,677,829	-		PFLU_RS20795	0.67	+2.9
4,677,829	-		PFLU_RS20795	0.67	-1.2
4,677,863	+		PFLU_RS20795	0.70	-1.9
4,677,863	+		PFLU_RS20795	0.70	+0.9
4,677,863	+		PFLU_RS20795	0.70	+0.9
4,677,863	+		PFLU_RS20795	0.70	+1.2
4,677,863	+		PFLU_RS20795	0.70	+1.7
4,677,863	+		PFLU_RS20795	0.70	-2.4
4,677,863	+		PFLU_RS20795	0.70	-3.0
4,677,863	+		PFLU_RS20795	0.70	-0.2
4,677,863	+		PFLU_RS20795	0.70	-1.7
4,677,863	+		PFLU_RS20795	0.70	-0.3
4,677,863	+		PFLU_RS20795	0.70	+2.0
4,677,863	+		PFLU_RS20795	0.70	+2.4
4,677,863	+		PFLU_RS20795	0.70	-1.7
4,677,863	+		PFLU_RS20795	0.70	-0.7
4,677,863	+		PFLU_RS20795	0.70	+1.9
4,677,863	+		PFLU_RS20795	0.70	-1.3
4,677,863	+		PFLU_RS20795	0.70	-1.7
4,677,863	+		PFLU_RS20795	0.70	+0.4
4,677,863	+		PFLU_RS20795	0.70	-2.5
4,677,863	+		PFLU_RS20795	0.70	-1.6
4,677,864	-		PFLU_RS20795	0.70	+1.4
4,677,864	-		PFLU_RS20795	0.70	-2.5
4,677,864	-		PFLU_RS20795	0.70	+1.0
4,677,864	-		PFLU_RS20795	0.70	+2.7
4,677,864	-		PFLU_RS20795	0.70	-2.0
4,677,864	-		PFLU_RS20795	0.70	-0.8
4,677,864	-		PFLU_RS20795	0.70	-1.8
4,677,864	-		PFLU_RS20795	0.70	+1.3
4,677,864	-		PFLU_RS20795	0.70	+0.3
4,677,864	-		PFLU_RS20795	0.70	-2.3
4,677,885	+		PFLU_RS20795	0.71	+1.5
4,678,000	-		PFLU_RS20795	0.79	-1.2
4,678,008	-		PFLU_RS20795	0.79	+0.7
4,678,008	-		PFLU_RS20795	0.79	-2.1
4,678,008	-		PFLU_RS20795	0.79	-1.0
4,678,008	-		PFLU_RS20795	0.79	-0.1
4,678,008	-		PFLU_RS20795	0.79	-0.3
4,678,080	-		PFLU_RS20795	0.84	-0.6
4,678,098	+		PFLU_RS20795	0.85	-0.2
4,678,118	-		PFLU_RS20795	0.86	-1.7
4,678,156	+		PFLU_RS20795	0.89	-2.9
4,678,156	+		PFLU_RS20795	0.89	+1.5
4,678,157	-		PFLU_RS20795	0.89	-2.3
4,678,157	-		PFLU_RS20795	0.89	+1.6
4,678,169	+		PFLU_RS20795	0.90	-3.6
4,678,204	+				+0.4
4,678,204	+				-1.7
4,678,204	+				-1.7
4,678,204	+				+0.2
4,678,204	+				+0.5
4,678,205	-				+1.2
4,678,205	-				+1.4
4,678,205	-				-1.0
4,678,273	+				+0.4
4,678,273	+				-0.2
4,678,273	+				-1.0
4,678,273	+				+2.1
4,678,273	+				-0.1
4,678,273	+				+1.6
4,678,273	+				+2.0
4,678,273	+				+3.0
4,678,274	-				-2.1
4,678,274	-				+2.5
4,678,274	-				+0.5
4,678,274	-				-2.5
4,678,274	-				+2.3
4,678,287	+				+2.0
4,678,321	+				-2.0
4,678,321	+				+1.4
4,678,321	+				+0.1
4,678,322	-				+0.8
4,678,322	-				-2.0
4,678,352	+				+1.3
4,678,352	+				-0.3
4,678,352	+				+0.1
4,678,352	+				-1.6
4,678,352	+				-1.0
4,678,352	+				+2.5
4,678,352	+				-0.0
4,678,352	+				+0.4
4,678,352	+				-2.7
4,678,352	+				-2.8
4,678,352	+				+0.4
4,678,352	+				-0.6
4,678,352	+				-0.4
4,678,352	+				-0.0
4,678,352	+				-2.7
4,678,352	+				+2.4
4,678,352	+				-0.3
4,678,352	+				+0.1
4,678,352	+				-0.6
4,678,352	+				+0.8
4,678,353	-				+0.1
4,678,353	-				-1.1
4,678,353	-				-0.6
4,678,353	-				-0.8
4,678,353	-				-2.4
4,678,353	-				+0.4
4,678,353	-				-1.8
4,678,353	-				-1.0
4,678,353	-				-0.8
4,678,353	-				-1.7
4,678,353	-				-0.3
4,678,353	-				+2.0
4,678,353	-				-1.3
4,678,353	-				+0.2
4,678,353	-				+2.3
4,678,354	+				-2.0
4,678,354	+				+1.0
4,678,354	+				-1.7
4,678,354	+				+2.0
4,678,354	+				-1.5
4,678,354	+				+1.3
4,678,354	+				-2.3
4,678,354	+				+1.0
4,678,354	+				+0.2
4,678,355	-				-0.0
4,678,355	-				+1.8
4,678,355	-				-1.0
4,678,355	-				+0.4
4,678,355	-				-2.2
4,678,355	-				-1.9
4,678,355	-				+1.0
4,678,355	-				-2.5
4,678,355	-				-0.5
4,678,363	-				+3.2
4,678,423	+				+2.0
4,678,424	-		PFLU_RS20800	0.10	+0.9
4,678,424	-		PFLU_RS20800	0.10	-0.3
4,678,519	-		PFLU_RS20800	0.24	-0.0
4,678,519	-		PFLU_RS20800	0.24	-2.8
4,678,562	+		PFLU_RS20800	0.30	-0.6
4,678,562	+		PFLU_RS20800	0.30	+0.6
4,678,562	+		PFLU_RS20800	0.30	-1.9
4,678,563	-		PFLU_RS20800	0.30	+0.4
4,678,563	-		PFLU_RS20800	0.30	-1.7
4,678,575	+		PFLU_RS20800	0.32	-1.3
4,678,575	+		PFLU_RS20800	0.32	+0.2
4,678,575	+		PFLU_RS20800	0.32	-1.0
4,678,579	+		PFLU_RS20800	0.33	-2.7
4,678,579	+		PFLU_RS20800	0.33	+0.8
4,678,579	+		PFLU_RS20800	0.33	+2.9
4,678,579	+		PFLU_RS20800	0.33	-1.3
4,678,580	-		PFLU_RS20800	0.33	-2.1
4,678,580	-		PFLU_RS20800	0.33	+1.0
4,678,580	-		PFLU_RS20800	0.33	+0.1
4,678,584	+		PFLU_RS20800	0.33	+0.1
4,678,584	+		PFLU_RS20800	0.33	-0.0
4,678,584	+		PFLU_RS20800	0.33	+0.5
4,678,584	+		PFLU_RS20800	0.33	-0.8
4,678,584	+		PFLU_RS20800	0.33	+0.4
4,678,584	+		PFLU_RS20800	0.33	-2.2
4,678,584	+		PFLU_RS20800	0.33	-0.8
4,678,584	+		PFLU_RS20800	0.33	+1.6
4,678,585	-		PFLU_RS20800	0.34	-0.8
4,678,585	-		PFLU_RS20800	0.34	+0.4
4,678,585	-		PFLU_RS20800	0.34	+3.6
4,678,585	-		PFLU_RS20800	0.34	+0.4
4,678,585	-		PFLU_RS20800	0.34	+2.1
4,678,585	-		PFLU_RS20800	0.34	+1.4
4,678,585	-		PFLU_RS20800	0.34	+3.2
4,678,585	-		PFLU_RS20800	0.34	+2.0
4,678,600	+		PFLU_RS20800	0.36	-2.1
4,678,601	-		PFLU_RS20800	0.36	-1.0
4,678,601	-		PFLU_RS20800	0.36	+0.8
4,678,649	+		PFLU_RS20800	0.43	+0.4
4,678,649	+		PFLU_RS20800	0.43	-1.9
4,678,650	-		PFLU_RS20800	0.43	+2.0
4,678,701	+		PFLU_RS20800	0.51	-2.9
4,678,701	+		PFLU_RS20800	0.51	+1.1
4,678,702	-		PFLU_RS20800	0.51	-1.2
4,678,702	-		PFLU_RS20800	0.51	+0.1
4,678,702	-		PFLU_RS20800	0.51	-1.2
4,678,702	-		PFLU_RS20800	0.51	-2.1
4,678,702	-		PFLU_RS20800	0.51	-1.9
4,678,711	+		PFLU_RS20800	0.52	-1.0
4,678,741	+		PFLU_RS20800	0.56	-1.3
4,678,742	-		PFLU_RS20800	0.57	-1.9
4,678,807	+		PFLU_RS20800	0.66	-0.2
4,678,807	+		PFLU_RS20800	0.66	+1.0
4,678,807	+		PFLU_RS20800	0.66	+2.7
4,678,808	-		PFLU_RS20800	0.66	-0.6
4,678,876	-		PFLU_RS20800	0.76	-2.3
4,678,876	-		PFLU_RS20800	0.76	-0.6
4,678,876	-		PFLU_RS20800	0.76	+0.4
4,678,876	-		PFLU_RS20800	0.76	-0.4
4,678,891	+		PFLU_RS20800	0.78	+1.0
4,678,891	+		PFLU_RS20800	0.78	+1.0
4,678,891	+		PFLU_RS20800	0.78	-1.5
4,678,891	+		PFLU_RS20800	0.78	-0.0
4,678,891	+		PFLU_RS20800	0.78	+0.4
4,678,891	+		PFLU_RS20800	0.78	-2.0
4,678,891	+		PFLU_RS20800	0.78	-2.9
4,678,891	+		PFLU_RS20800	0.78	+1.2
4,678,892	-		PFLU_RS20800	0.79	-0.3
4,678,892	-		PFLU_RS20800	0.79	-3.1
4,678,892	-		PFLU_RS20800	0.79	+2.2
4,678,892	-		PFLU_RS20800	0.79	+2.0
4,678,892	-		PFLU_RS20800	0.79	+3.2
4,678,892	-		PFLU_RS20800	0.79	+2.3
4,678,892	-		PFLU_RS20800	0.79	+1.0
4,678,984	+				+0.9
4,679,005	+				+0.5
4,679,005	+				+3.6
4,679,005	+				+1.0
4,679,006	-				-0.6
4,679,047	+				-2.8
4,679,047	+				+0.9
4,679,047	+				+1.0
4,679,047	+				-1.0
4,679,048	-				-0.0
4,679,048	-				+1.7
4,679,048	-				+2.8
4,679,048	-				-1.3
4,679,079	-				+0.4
4,679,079	-				-0.6
4,679,100	+				-2.6
4,679,100	+				+2.0
4,679,100	+				+2.2
4,679,101	-				-0.0
4,679,101	-				+2.2
4,679,160	+				-0.0
4,679,160	+				-1.5
4,679,160	+				+0.7
4,679,160	+				-1.7
4,679,160	+				-1.8
4,679,161	-				+1.5
4,679,161	-				-1.0
4,679,161	-				+1.0
4,679,161	-				+0.1
4,679,161	-				-1.2
4,679,161	-				+1.0
4,679,161	-				+2.0
4,679,161	-				+1.1
4,679,174	+				-2.6
4,679,174	+				+1.5
4,679,174	+				-1.1
4,679,174	+				+1.7
4,679,174	+				+1.1
4,679,174	+				+0.5
4,679,174	+				-1.0
4,679,175	-				+1.8
4,679,175	-				+0.7
4,679,175	-				-1.9
4,679,175	-				+2.0
4,679,175	-				+0.4
4,679,175	-				+0.7
4,679,175	-				+1.0
4,679,175	-				+1.5
4,679,179	+				-0.6
4,679,180	-				-1.6
4,679,180	-				+4.0
4,679,180	-				-0.3
4,679,180	-				-1.3
4,679,180	-				-1.2
4,679,180	-				-2.5
4,679,180	-				-1.5
4,679,180	-				-0.0
4,679,180	-				+0.8
4,679,193	+				-1.6