Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17790

Experiment: L-Lysine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lysine (C)
4,039,903	+				-1.7
4,039,904	-				+0.0
4,040,009	+				-0.2
4,040,009	+				+0.1
4,040,009	+				+0.8
4,040,010	-				+1.0
4,040,010	-				-0.7
4,040,010	-				-2.1
4,040,010	-				+1.0
4,040,124	+				+1.8
4,040,125	-				+1.1
4,040,125	-				+0.6
4,040,142	+				+1.4
4,040,186	-				+0.5
4,040,331	+		PFLU_RS17785	0.15	+0.2
4,040,331	+		PFLU_RS17785	0.15	-2.0
4,040,332	-		PFLU_RS17785	0.16	-0.7
4,040,332	-		PFLU_RS17785	0.16	-0.5
4,040,443	+		PFLU_RS17785	0.45	-1.0
4,040,464	-		PFLU_RS17785	0.50	-1.2
4,040,500	-		PFLU_RS17785	0.60	-0.1
4,040,500	-		PFLU_RS17785	0.60	-1.7
4,040,500	-		PFLU_RS17785	0.60	+2.5
4,040,500	-		PFLU_RS17785	0.60	+2.2
4,040,500	-		PFLU_RS17785	0.60	-1.2
4,040,500	-		PFLU_RS17785	0.60	-0.0
4,040,500	-		PFLU_RS17785	0.60	-0.8
4,040,500	-		PFLU_RS17785	0.60	-0.2
4,040,500	-		PFLU_RS17785	0.60	+2.7
4,040,501	+		PFLU_RS17785	0.60	+1.4
4,040,501	+		PFLU_RS17785	0.60	-0.5
4,040,501	+		PFLU_RS17785	0.60	-1.4
4,040,518	+		PFLU_RS17785	0.65	-1.8
4,040,518	+		PFLU_RS17785	0.65	+0.2
4,040,518	+		PFLU_RS17785	0.65	-1.0
4,040,518	+		PFLU_RS17785	0.65	+0.8
4,040,518	+		PFLU_RS17785	0.65	+1.1
4,040,518	+		PFLU_RS17785	0.65	+2.0
4,040,518	+		PFLU_RS17785	0.65	+0.8
4,040,518	+		PFLU_RS17785	0.65	-1.0
4,040,518	+		PFLU_RS17785	0.65	-2.2
4,040,519	-		PFLU_RS17785	0.65	-0.5
4,040,519	-		PFLU_RS17785	0.65	-2.3
4,040,519	-		PFLU_RS17785	0.65	-2.2
4,040,519	-		PFLU_RS17785	0.65	+0.4
4,040,613	+		PFLU_RS17785	0.90	+0.4
4,040,614	-		PFLU_RS17785	0.90	-0.5
4,040,614	-		PFLU_RS17785	0.90	+0.2
4,040,617	+				+0.2
4,040,617	+				-1.2
4,040,691	+				-1.0
4,040,691	+				-1.4
4,040,691	+				-1.2
4,040,692	-				+0.8
4,040,692	-				-1.5
4,040,700	-				-0.8
4,040,702	+				+1.1
4,040,702	+				-0.2
4,040,703	-		PFLU_RS17790	0.10	+2.2
4,040,711	+		PFLU_RS17790	0.12	-0.0
4,040,711	+		PFLU_RS17790	0.12	+1.8
4,040,712	-		PFLU_RS17790	0.12	+0.2
4,040,712	-		PFLU_RS17790	0.12	+1.3
4,040,713	+		PFLU_RS17790	0.12	-0.8
4,040,713	+		PFLU_RS17790	0.12	-0.5
4,040,713	+		PFLU_RS17790	0.12	-1.2
4,040,713	+		PFLU_RS17790	0.12	-0.7
4,040,714	-		PFLU_RS17790	0.13	-0.3
4,040,714	-		PFLU_RS17790	0.13	-1.5
4,040,714	-		PFLU_RS17790	0.13	+2.2
4,040,714	-		PFLU_RS17790	0.13	+0.4
4,040,731	+		PFLU_RS17790	0.17	-1.4
4,040,764	+		PFLU_RS17790	0.25	+0.4
4,040,773	-		PFLU_RS17790	0.27	-1.4
4,040,834	+		PFLU_RS17790	0.41	-0.2
4,040,834	+		PFLU_RS17790	0.41	-0.7
4,040,834	+		PFLU_RS17790	0.41	-0.2
4,040,834	+		PFLU_RS17790	0.41	-2.4
4,040,834	+		PFLU_RS17790	0.41	-0.5
4,040,835	-		PFLU_RS17790	0.42	-1.0
4,040,835	-		PFLU_RS17790	0.42	-0.5
4,040,838	+		PFLU_RS17790	0.42	-1.8
4,040,839	-		PFLU_RS17790	0.43	-2.7
4,040,847	+		PFLU_RS17790	0.44	+1.4
4,040,847	+		PFLU_RS17790	0.44	-1.0
4,040,848	-		PFLU_RS17790	0.45	+1.5
4,040,862	-		PFLU_RS17790	0.48	+1.4
4,040,863	+		PFLU_RS17790	0.48	-1.5
4,040,943	+		PFLU_RS17790	0.67	+1.4
4,040,943	+		PFLU_RS17790	0.67	+0.7
4,040,943	+		PFLU_RS17790	0.67	-1.7
4,040,943	+		PFLU_RS17790	0.67	-1.2
4,040,943	+		PFLU_RS17790	0.67	-1.5
4,040,943	+		PFLU_RS17790	0.67	+0.8
4,040,944	-		PFLU_RS17790	0.68	-1.5
4,040,944	-		PFLU_RS17790	0.68	-1.5
4,040,944	-		PFLU_RS17790	0.68	-0.5
4,040,944	-		PFLU_RS17790	0.68	+0.2
4,040,947	+		PFLU_RS17790	0.68	+1.5
4,040,947	+		PFLU_RS17790	0.68	+1.0
4,040,947	+		PFLU_RS17790	0.68	-0.8
4,040,947	+		PFLU_RS17790	0.68	+1.8
4,040,947	+		PFLU_RS17790	0.68	+0.3
4,040,947	+		PFLU_RS17790	0.68	+0.6
4,040,947	+		PFLU_RS17790	0.68	+0.2
4,040,947	+		PFLU_RS17790	0.68	-0.5
4,040,947	+		PFLU_RS17790	0.68	-0.5
4,040,948	-		PFLU_RS17790	0.69	-0.8
4,040,948	-		PFLU_RS17790	0.69	-1.5
4,040,948	-		PFLU_RS17790	0.69	+0.8
4,040,948	-		PFLU_RS17790	0.69	+2.4
4,040,974	+		PFLU_RS17790	0.75	+2.4
4,041,007	+		PFLU_RS17790	0.83	+1.0
4,041,007	+		PFLU_RS17790	0.83	-0.5
4,041,007	+		PFLU_RS17790	0.83	+1.0
4,041,007	+		PFLU_RS17790	0.83	-0.6
4,041,007	+		PFLU_RS17790	0.83	+1.5
4,041,007	+		PFLU_RS17790	0.83	+0.8
4,041,007	+		PFLU_RS17790	0.83	+0.2
4,041,007	+		PFLU_RS17790	0.83	+1.4
4,041,007	+		PFLU_RS17790	0.83	-0.5
4,041,007	+		PFLU_RS17790	0.83	-1.2
4,041,007	+		PFLU_RS17790	0.83	-0.5
4,041,007	+		PFLU_RS17790	0.83	+1.7
4,041,007	+		PFLU_RS17790	0.83	+0.6
4,041,007	+		PFLU_RS17790	0.83	+1.2
4,041,007	+		PFLU_RS17790	0.83	-1.0
4,041,007	+		PFLU_RS17790	0.83	-1.0
4,041,007	+		PFLU_RS17790	0.83	+1.1
4,041,007	+		PFLU_RS17790	0.83	+0.8
4,041,007	+		PFLU_RS17790	0.83	-1.4
4,041,008	-		PFLU_RS17790	0.83	+1.5
4,041,008	-		PFLU_RS17790	0.83	+0.9
4,041,008	-		PFLU_RS17790	0.83	+0.8
4,041,008	-		PFLU_RS17790	0.83	-0.2
4,041,008	-		PFLU_RS17790	0.83	+0.9
4,041,008	-		PFLU_RS17790	0.83	+1.8
4,041,008	-		PFLU_RS17790	0.83	+0.2
4,041,008	-		PFLU_RS17790	0.83	+2.0
4,041,008	-		PFLU_RS17790	0.83	+0.8
4,041,008	-		PFLU_RS17790	0.83	+0.0
4,041,008	-		PFLU_RS17790	0.83	+0.7
4,041,008	-		PFLU_RS17790	0.83	-0.5
4,041,008	-		PFLU_RS17790	0.83	-1.4
4,041,008	-		PFLU_RS17790	0.83	+1.0
4,041,008	-		PFLU_RS17790	0.83	-2.8
4,041,170	+				+1.6
4,041,181	-				+1.2
4,041,284	+				+2.5
4,041,285	-				+0.8
4,041,377	-				-1.7
4,041,377	-				-1.4
4,041,384	+				-1.5
4,041,385	-				-0.5
4,041,385	-				+1.7
4,041,417	+				-2.8
4,041,417	+				-0.5
4,041,418	-				+0.4
4,041,418	-				+1.6
4,041,431	-				-0.7
4,041,436	+				+0.6
4,041,436	+				+0.8
4,041,437	-				-0.5
4,041,437	-				-0.5
4,041,437	-				-1.0
4,041,437	-				+0.5
4,041,480	-		PFLU_RS17795	0.11	-2.7
4,041,552	+		PFLU_RS17795	0.17	+0.5
4,041,553	-		PFLU_RS17795	0.17	+0.9
4,041,659	-		PFLU_RS17795	0.26	-0.7
4,041,659	-		PFLU_RS17795	0.26	+1.4
4,041,722	+		PFLU_RS17795	0.31	-1.0
4,041,723	-		PFLU_RS17795	0.31	+2.0
4,041,723	-		PFLU_RS17795	0.31	+1.8
4,041,723	-		PFLU_RS17795	0.31	-0.4
4,041,723	-		PFLU_RS17795	0.31	+2.5
4,041,723	-		PFLU_RS17795	0.31	-1.5
4,041,787	+		PFLU_RS17795	0.36	+0.4
4,041,788	-		PFLU_RS17795	0.36	-2.1
4,041,788	-		PFLU_RS17795	0.36	+0.1