Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16840

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
3,820,511	-				+1.2
3,820,511	-				-0.3
3,820,511	-				-0.4
3,820,511	-				-0.0
3,820,511	-				+0.4
3,820,511	-				-0.9
3,820,511	-				-1.9
3,820,511	-				-1.8
3,820,511	-				-0.8
3,820,616	-				+0.1
3,820,616	-				+0.4
3,820,616	-				-0.9
3,820,616	-				-0.2
3,820,786	-				-0.4
3,820,793	-				-0.6
3,820,793	-				+1.2
3,820,793	-				+0.2
3,820,793	-				-0.4
3,820,849	+				-1.4
3,820,849	+				-0.4
3,820,849	+				-2.4
3,820,849	+				-0.6
3,820,849	+				-1.4
3,820,850	-				-1.7
3,820,850	-				+1.0
3,820,850	-				+1.0
3,820,850	-				+0.6
3,820,850	-				+1.0
3,820,850	-				+1.2
3,820,850	-				-0.6
3,820,850	-				+0.2
3,820,851	+				-0.4
3,820,851	+				+1.2
3,820,851	+				+0.4
3,820,851	+				+1.2
3,820,851	+				+1.7
3,820,851	+				+1.5
3,820,851	+				+1.2
3,820,851	+				-2.1
3,820,851	+				-1.6
3,820,851	+				-1.1
3,820,851	+				+0.6
3,820,851	+				-0.4
3,820,851	+				-0.4
3,820,851	+				-1.8
3,820,851	+				+2.7
3,820,851	+				+0.9
3,820,851	+				-0.8
3,820,851	+				+0.9
3,820,851	+				-1.9
3,820,851	+				+1.8
3,820,851	+				-1.6
3,820,852	-				+0.8
3,820,852	-				+0.5
3,820,852	-				+1.2
3,820,852	-				+0.8
3,820,852	-				-0.5
3,820,852	-				-0.2
3,820,852	-				+0.4
3,820,852	-				-0.1
3,820,852	-				+0.1
3,820,852	-				+0.1
3,820,852	-				+0.6
3,820,852	-				+1.0
3,820,852	-				-0.4
3,820,852	-				+0.7
3,820,852	-				-1.4
3,820,852	-				-0.1
3,820,852	-				+1.9
3,820,852	-				+0.8
3,820,852	-				+0.3
3,820,852	-				+0.7
3,820,852	-				-0.2
3,820,852	-				+1.4
3,820,852	-				+1.0
3,820,852	-				-1.1
3,820,852	-				-2.4
3,820,852	-				+1.2
3,820,852	-				+1.8
3,820,852	-				+0.2
3,820,859	+				+1.5
3,820,859	+				-1.4
3,820,859	+				+0.4
3,820,859	+				-1.1
3,820,859	+				+0.3
3,820,859	+				+1.2
3,820,860	-				-1.4
3,820,860	-				+1.5
3,820,860	-				-2.7
3,820,860	-				+0.0
3,820,860	-				+1.5
3,820,860	-				-0.4
3,820,860	-				+0.4
3,820,860	-				-1.1
3,820,860	-				+0.2
3,820,860	-				-0.8
3,820,860	-				-1.2
3,820,860	-				+0.2
3,820,970	+		PFLU_RS16835	0.14	-0.8
3,820,970	+		PFLU_RS16835	0.14	+0.7
3,820,971	-		PFLU_RS16835	0.15	-0.4
3,820,971	-		PFLU_RS16835	0.15	+0.9
3,821,006	+		PFLU_RS16835	0.23	-0.8
3,821,006	+		PFLU_RS16835	0.23	-0.4
3,821,006	+		PFLU_RS16835	0.23	+0.4
3,821,006	+		PFLU_RS16835	0.23	+2.1
3,821,006	+		PFLU_RS16835	0.23	+0.6
3,821,006	+		PFLU_RS16835	0.23	-1.9
3,821,006	+		PFLU_RS16835	0.23	-1.1
3,821,007	-		PFLU_RS16835	0.23	-0.8
3,821,007	-		PFLU_RS16835	0.23	-0.8
3,821,007	-		PFLU_RS16835	0.23	-0.2
3,821,007	-		PFLU_RS16835	0.23	+1.1
3,821,007	-		PFLU_RS16835	0.23	-0.4
3,821,007	-		PFLU_RS16835	0.23	-1.4
3,821,007	-		PFLU_RS16835	0.23	+0.5
3,821,037	+		PFLU_RS16835	0.30	-0.8
3,821,037	+		PFLU_RS16835	0.30	-0.9
3,821,037	+		PFLU_RS16835	0.30	+1.0
3,821,038	-		PFLU_RS16835	0.30	-0.6
3,821,038	-		PFLU_RS16835	0.30	+0.9
3,821,038	-		PFLU_RS16835	0.30	+0.1
3,821,121	+		PFLU_RS16835	0.50	+1.2
3,821,121	+		PFLU_RS16835	0.50	-0.4
3,821,149	-		PFLU_RS16835	0.57	-0.1
3,821,224	-		PFLU_RS16835	0.74	-1.9
3,821,259	-		PFLU_RS16835	0.83	+0.2
3,821,309	+				+1.2
3,821,309	+				-0.8
3,821,309	+				-1.4
3,821,310	-				-0.6
3,821,310	-				-1.1
3,821,310	-				-0.4
3,821,310	-				+1.2
3,821,355	+		PFLU_RS16840	0.10	-1.5
3,821,356	-		PFLU_RS16840	0.10	-1.8
3,821,481	+		PFLU_RS16840	0.51	+0.6
3,821,481	+		PFLU_RS16840	0.51	-0.9
3,821,482	-		PFLU_RS16840	0.52	-0.5
3,821,482	-		PFLU_RS16840	0.52	+0.2
3,821,580	+		PFLU_RS16840	0.84	+0.2
3,821,580	+		PFLU_RS16840	0.84	-0.4
3,821,580	+		PFLU_RS16840	0.84	+1.8
3,821,581	-		PFLU_RS16840	0.84	+0.3
3,821,581	-		PFLU_RS16840	0.84	-3.0
3,821,581	-		PFLU_RS16840	0.84	-0.1
3,821,581	-		PFLU_RS16840	0.84	-1.1
3,821,581	-		PFLU_RS16840	0.84	+1.7
3,821,616	+				+0.2
3,821,616	+				-1.1
3,821,616	+				-0.2
3,821,616	+				+0.0
3,821,616	+				-1.4
3,821,616	+				+1.5
3,821,617	-				+1.2
3,821,617	-				-0.7
3,821,617	-				-1.4
3,821,617	-				-0.4
3,821,617	-				+1.6
3,821,617	-				+0.7
3,821,617	-				-0.3
3,821,617	-				+3.2
3,821,617	-				+1.0
3,821,617	-				-0.9
3,821,617	-				+0.5
3,821,617	-				-0.4
3,821,617	-				-0.8
3,821,617	-				-0.4
3,821,617	-				+0.9
3,821,617	-				-1.8
3,821,617	-				+0.4
3,821,669	-				-1.2
3,821,669	-				-2.2
3,821,727	+				+0.0
3,821,727	+				-0.4
3,821,727	+				+0.2
3,821,868	+		PFLU_RS16845	0.20	+0.4
3,821,868	+		PFLU_RS16845	0.20	+0.5
3,821,869	-		PFLU_RS16845	0.20	+2.0
3,821,869	-		PFLU_RS16845	0.20	+1.2
3,821,869	-		PFLU_RS16845	0.20	+0.2
3,821,945	-		PFLU_RS16845	0.29	-1.1
3,822,107	+		PFLU_RS16845	0.50	+0.7
3,822,197	+		PFLU_RS16845	0.61	+0.5
3,822,197	+		PFLU_RS16845	0.61	+1.4
3,822,198	-		PFLU_RS16845	0.61	+0.7
3,822,198	-		PFLU_RS16845	0.61	-2.2
3,822,198	-		PFLU_RS16845	0.61	+0.2
3,822,320	+		PFLU_RS16845	0.77	-1.3
3,822,376	-		PFLU_RS16845	0.84	+0.3
3,822,472	+				+0.6
3,822,472	+				-0.6
3,822,473	-				-0.6
3,822,473	-				-0.7
3,822,473	-				+1.6
3,822,473	-				-1.4
3,822,481	+				-0.4
3,822,481	+				-0.1
3,822,504	+				-0.4
3,822,504	+				-1.9
3,822,504	+				+0.2
3,822,504	+				-1.6
3,822,505	-				-1.1
3,822,505	-				-3.2
3,822,505	-				-1.3
3,822,505	-				-2.8
3,822,505	-				+1.0
3,822,505	-				+0.1
3,822,510	+				+0.5
3,822,510	+				-1.5
3,822,510	+				-0.2
3,822,511	-				+0.1
3,822,511	-				-0.6
3,822,511	-				+0.5
3,822,514	+				+0.9
3,822,514	+				-1.8
3,822,514	+				-0.4
3,822,514	+				+1.8
3,822,514	+				+1.9
3,822,514	+				+1.4
3,822,515	-				+0.8
3,822,515	-				+0.6
3,822,515	-				-0.4
3,822,515	-				+0.4
3,822,515	-				-1.2