Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24550

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
5,499,842	-		PFLU_RS24545	0.50	+1.0
5,500,169	-		PFLU_RS24545	0.74	+0.4
5,500,304	-		PFLU_RS24545	0.83	-0.0
5,500,454	-				+1.0
5,500,554	+				+0.4
5,500,555	-				+3.0
5,500,555	-				-1.7
5,500,555	-				-0.5
5,500,555	-				+0.4
5,500,610	+				+0.2
5,500,610	+				-0.3
5,500,610	+				-1.0
5,500,610	+				+2.0
5,500,610	+				+0.3
5,500,610	+				+2.4
5,500,611	-				+0.5
5,500,611	-				-1.7
5,500,611	-				-0.3
5,500,611	-				+0.4
5,500,611	-				-0.2
5,500,857	-		PFLU_RS24550	0.19	+2.0
5,501,851	+				+2.0
5,501,896	+				+2.0
5,501,897	-				+0.4
5,501,944	-				+2.0
5,501,944	-				+2.0
5,501,944	-				-1.5
5,501,987	-				-2.1
5,501,987	-				+1.0
5,501,987	-				+1.1
5,502,002	+				+1.6
5,502,002	+				+1.2
5,502,002	+				-0.8
5,502,003	-				-0.7
5,502,044	+				-1.4
5,502,044	+				-2.4
5,502,044	+				+1.0
5,502,133	-		PFLU_RS24555	0.12	-0.4
5,502,259	+		PFLU_RS24555	0.30	+1.2
5,502,259	+		PFLU_RS24555	0.30	-0.3
5,502,259	+		PFLU_RS24555	0.30	+0.9
5,502,259	+		PFLU_RS24555	0.30	+1.2
5,502,260	-		PFLU_RS24555	0.30	+0.1
5,502,260	-		PFLU_RS24555	0.30	+1.4
5,502,260	-		PFLU_RS24555	0.30	-1.4
5,502,313	+		PFLU_RS24555	0.37	-2.3
5,502,313	+		PFLU_RS24555	0.37	-0.6
5,502,313	+		PFLU_RS24555	0.37	+1.4
5,502,313	+		PFLU_RS24555	0.37	-0.1
5,502,313	+		PFLU_RS24555	0.37	+0.6
5,502,313	+		PFLU_RS24555	0.37	-1.8
5,502,313	+		PFLU_RS24555	0.37	-1.9
5,502,313	+		PFLU_RS24555	0.37	-2.7
5,502,313	+		PFLU_RS24555	0.37	-2.4
5,502,313	+		PFLU_RS24555	0.37	+1.2
5,502,314	-		PFLU_RS24555	0.37	-2.6
5,502,314	-		PFLU_RS24555	0.37	+1.3
5,502,314	-		PFLU_RS24555	0.37	-0.5
5,502,314	-		PFLU_RS24555	0.37	-0.9
5,502,314	-		PFLU_RS24555	0.37	+2.3
5,502,314	-		PFLU_RS24555	0.37	-0.5
5,502,314	-		PFLU_RS24555	0.37	+0.3
5,502,314	-		PFLU_RS24555	0.37	-0.7
5,502,314	-		PFLU_RS24555	0.37	-1.0
5,502,314	-		PFLU_RS24555	0.37	-0.4
5,502,314	-		PFLU_RS24555	0.37	+0.4
5,502,314	-		PFLU_RS24555	0.37	+0.3
5,502,317	+		PFLU_RS24555	0.37	-1.7
5,502,317	+		PFLU_RS24555	0.37	-0.0
5,502,317	+		PFLU_RS24555	0.37	+0.6
5,502,317	+		PFLU_RS24555	0.37	+0.4
5,502,317	+		PFLU_RS24555	0.37	-2.1
5,502,317	+		PFLU_RS24555	0.37	-0.3
5,502,317	+		PFLU_RS24555	0.37	+1.8
5,502,317	+		PFLU_RS24555	0.37	-2.8
5,502,318	-		PFLU_RS24555	0.38	-2.7
5,502,318	-		PFLU_RS24555	0.38	+3.6
5,502,318	-		PFLU_RS24555	0.38	-0.4
5,502,318	-		PFLU_RS24555	0.38	-0.8
5,502,318	-		PFLU_RS24555	0.38	+0.1
5,502,318	-		PFLU_RS24555	0.38	-1.5
5,502,322	+		PFLU_RS24555	0.38	+0.0
5,502,322	+		PFLU_RS24555	0.38	-0.1
5,502,322	+		PFLU_RS24555	0.38	+2.0
5,502,322	+		PFLU_RS24555	0.38	-2.4
5,502,322	+		PFLU_RS24555	0.38	-0.0
5,502,322	+		PFLU_RS24555	0.38	-0.2
5,502,322	+		PFLU_RS24555	0.38	+0.2
5,502,322	+		PFLU_RS24555	0.38	-0.4
5,502,322	+		PFLU_RS24555	0.38	+0.7
5,502,322	+		PFLU_RS24555	0.38	-0.9
5,502,322	+		PFLU_RS24555	0.38	-1.8
5,502,322	+		PFLU_RS24555	0.38	-2.7
5,502,322	+		PFLU_RS24555	0.38	-0.0
5,502,322	+		PFLU_RS24555	0.38	-0.0
5,502,322	+		PFLU_RS24555	0.38	-1.4
5,502,322	+		PFLU_RS24555	0.38	+1.2
5,502,322	+		PFLU_RS24555	0.38	-1.0
5,502,323	-		PFLU_RS24555	0.38	+1.4
5,502,323	-		PFLU_RS24555	0.38	+1.0
5,502,323	-		PFLU_RS24555	0.38	-0.0
5,502,323	-		PFLU_RS24555	0.38	+0.4
5,502,323	-		PFLU_RS24555	0.38	-1.0
5,502,323	-		PFLU_RS24555	0.38	-0.9
5,502,323	-		PFLU_RS24555	0.38	-1.2
5,502,323	-		PFLU_RS24555	0.38	+1.2
5,502,323	-		PFLU_RS24555	0.38	+0.2
5,502,323	-		PFLU_RS24555	0.38	-0.7
5,502,323	-		PFLU_RS24555	0.38	-1.8
5,502,323	-		PFLU_RS24555	0.38	+0.4
5,502,323	-		PFLU_RS24555	0.38	-1.9
5,502,323	-		PFLU_RS24555	0.38	+2.8
5,502,323	-		PFLU_RS24555	0.38	-2.1
5,502,323	-		PFLU_RS24555	0.38	+0.2
5,502,323	-		PFLU_RS24555	0.38	-0.7
5,502,323	-		PFLU_RS24555	0.38	+0.1
5,502,323	-		PFLU_RS24555	0.38	+0.2
5,502,323	-		PFLU_RS24555	0.38	-2.4
5,502,323	-		PFLU_RS24555	0.38	+1.4
5,502,323	-		PFLU_RS24555	0.38	+2.3
5,502,323	-		PFLU_RS24555	0.38	-1.8
5,502,377	+		PFLU_RS24555	0.46	-0.1
5,502,377	+		PFLU_RS24555	0.46	+0.9
5,502,437	+		PFLU_RS24555	0.54	-0.4
5,502,437	+		PFLU_RS24555	0.54	+2.6
5,502,437	+		PFLU_RS24555	0.54	-0.5
5,502,438	-		PFLU_RS24555	0.54	+1.8
5,502,545	+		PFLU_RS24555	0.69	-1.1
5,502,560	+		PFLU_RS24555	0.71	+0.9
5,502,560	+		PFLU_RS24555	0.71	+0.7
5,502,560	+		PFLU_RS24555	0.71	-0.5
5,502,560	+		PFLU_RS24555	0.71	-2.6
5,502,560	+		PFLU_RS24555	0.71	-0.4
5,502,561	-		PFLU_RS24555	0.71	-0.8
5,502,561	-		PFLU_RS24555	0.71	+1.4
5,502,561	-		PFLU_RS24555	0.71	-0.1
5,502,561	-		PFLU_RS24555	0.71	+0.3
5,502,581	+		PFLU_RS24555	0.73	+0.5
5,502,581	+		PFLU_RS24555	0.73	-2.5
5,502,581	+		PFLU_RS24555	0.73	-0.4
5,502,581	+		PFLU_RS24555	0.73	+0.0
5,502,582	-		PFLU_RS24555	0.74	-0.3
5,502,582	-		PFLU_RS24555	0.74	+0.7
5,502,582	-		PFLU_RS24555	0.74	+0.2
5,502,614	+		PFLU_RS24555	0.78	-2.5
5,502,614	+		PFLU_RS24555	0.78	-1.2
5,502,614	+		PFLU_RS24555	0.78	+0.5
5,502,614	+		PFLU_RS24555	0.78	+1.2
5,502,615	-		PFLU_RS24555	0.78	+1.3
5,502,615	-		PFLU_RS24555	0.78	+0.5
5,502,615	-		PFLU_RS24555	0.78	+2.0
5,502,615	-		PFLU_RS24555	0.78	+2.4
5,502,756	+				-1.0
5,502,756	+				+0.4
5,502,812	+				-0.5
5,502,813	-				-1.8
5,502,867	-				-0.6
5,502,867	-				+1.0
5,502,867	-				-1.4