Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06525

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
1,457,485	+		PFLU_RS06515	0.67	-2.2
1,457,485	+		PFLU_RS06515	0.67	-0.2
1,457,485	+		PFLU_RS06515	0.67	-0.2
1,457,486	-		PFLU_RS06515	0.67	-2.3
1,457,486	-		PFLU_RS06515	0.67	+3.2
1,457,486	-		PFLU_RS06515	0.67	+0.7
1,457,486	-		PFLU_RS06515	0.67	+0.4
1,457,486	-		PFLU_RS06515	0.67	+0.3
1,457,486	-		PFLU_RS06515	0.67	+1.7
1,457,488	+		PFLU_RS06515	0.67	-2.5
1,457,488	+		PFLU_RS06515	0.67	-1.9
1,457,489	-		PFLU_RS06515	0.68	+3.3
1,457,495	+		PFLU_RS06515	0.69	-0.3
1,457,495	+		PFLU_RS06515	0.69	+0.4
1,457,495	+		PFLU_RS06515	0.69	-1.9
1,457,495	+		PFLU_RS06515	0.69	-0.9
1,457,495	+		PFLU_RS06515	0.69	-1.5
1,457,495	+		PFLU_RS06515	0.69	+0.4
1,457,495	+		PFLU_RS06515	0.69	+0.5
1,457,495	+		PFLU_RS06515	0.69	+2.3
1,457,495	+		PFLU_RS06515	0.69	-2.1
1,457,495	+		PFLU_RS06515	0.69	-2.6
1,457,495	+		PFLU_RS06515	0.69	-2.5
1,457,495	+		PFLU_RS06515	0.69	-0.9
1,457,495	+		PFLU_RS06515	0.69	-1.1
1,457,495	+		PFLU_RS06515	0.69	-0.2
1,457,496	-		PFLU_RS06515	0.69	-1.7
1,457,496	-		PFLU_RS06515	0.69	+0.3
1,457,496	-		PFLU_RS06515	0.69	-0.3
1,457,496	-		PFLU_RS06515	0.69	+0.9
1,457,496	-		PFLU_RS06515	0.69	+0.2
1,457,496	-		PFLU_RS06515	0.69	-0.2
1,457,496	-		PFLU_RS06515	0.69	+2.4
1,457,496	-		PFLU_RS06515	0.69	+1.4
1,457,496	-		PFLU_RS06515	0.69	+0.8
1,457,499	+		PFLU_RS06515	0.70	-0.3
1,457,499	+		PFLU_RS06515	0.70	-0.8
1,457,499	+		PFLU_RS06515	0.70	+2.0
1,457,499	+		PFLU_RS06515	0.70	-0.9
1,457,500	-		PFLU_RS06515	0.70	+0.5
1,457,500	-		PFLU_RS06515	0.70	+0.7
1,457,500	-		PFLU_RS06515	0.70	-0.9
1,457,500	-		PFLU_RS06515	0.70	+0.6
1,457,520	+		PFLU_RS06515	0.74	-0.6
1,457,520	+		PFLU_RS06515	0.74	-0.3
1,457,521	-		PFLU_RS06515	0.74	+1.4
1,457,521	-		PFLU_RS06515	0.74	+1.2
1,457,521	-		PFLU_RS06515	0.74	+0.8
1,457,529	+		PFLU_RS06515	0.76	-0.2
1,457,580	+		PFLU_RS06515	0.87	+0.2
1,457,581	-		PFLU_RS06515	0.87	-0.0
1,457,635	+				-0.0
1,457,635	+				-0.5
1,457,635	+				+1.0
1,457,635	+				+0.7
1,457,635	+				-0.8
1,457,635	+				-0.6
1,457,635	+				-1.0
1,457,635	+				+0.6
1,457,635	+				-1.1
1,457,635	+				+0.3
1,457,635	+				-0.6
1,457,635	+				+1.2
1,457,635	+				+0.2
1,457,635	+				+2.1
1,457,635	+				+1.7
1,457,635	+				+0.5
1,457,635	+				+1.8
1,457,635	+				+1.8
1,457,635	+				+1.8
1,457,635	+				+1.2
1,457,636	-				-0.3
1,457,636	-				+0.5
1,457,636	-				+0.2
1,457,636	-				+0.2
1,457,636	-				+1.3
1,457,636	-				+0.4
1,457,636	-				-0.3
1,457,636	-				+2.1
1,457,636	-				+0.6
1,457,636	-				+2.0
1,457,636	-				-2.9
1,457,636	-				-1.2
1,457,636	-				-1.8
1,457,636	-				+2.4
1,457,647	+				+2.6
1,457,656	+				+1.0
1,457,656	+				+0.8
1,457,656	+				+0.6
1,457,656	+				+0.7
1,457,656	+				+0.6
1,457,656	+				-1.2
1,457,657	-				+1.0
1,457,657	-				-2.2
1,457,657	-				-2.8
1,457,657	-				+0.8
1,457,657	-				-0.2
1,457,657	-				-2.1
1,457,657	-				+1.5
1,457,657	-				+2.5
1,457,717	+		PFLU_RS06520	0.14	-0.6
1,457,717	+		PFLU_RS06520	0.14	-2.2
1,457,717	+		PFLU_RS06520	0.14	-0.5
1,457,717	+		PFLU_RS06520	0.14	+1.2
1,457,717	+		PFLU_RS06520	0.14	+2.6
1,457,717	+		PFLU_RS06520	0.14	+0.0
1,457,717	+		PFLU_RS06520	0.14	-0.0
1,457,717	+		PFLU_RS06520	0.14	+2.9
1,457,717	+		PFLU_RS06520	0.14	-2.3
1,457,717	+		PFLU_RS06520	0.14	-0.9
1,457,717	+		PFLU_RS06520	0.14	-1.0
1,457,717	+		PFLU_RS06520	0.14	-1.7
1,457,718	-		PFLU_RS06520	0.14	+0.2
1,457,718	-		PFLU_RS06520	0.14	+0.5
1,457,718	-		PFLU_RS06520	0.14	-1.5
1,457,718	-		PFLU_RS06520	0.14	-0.3
1,457,718	-		PFLU_RS06520	0.14	+0.3
1,457,718	-		PFLU_RS06520	0.14	-0.3
1,457,718	-		PFLU_RS06520	0.14	-2.0
1,457,719	+		PFLU_RS06520	0.15	+0.3
1,457,719	+		PFLU_RS06520	0.15	+0.1
1,457,719	+		PFLU_RS06520	0.15	+1.4
1,457,719	+		PFLU_RS06520	0.15	+0.6
1,457,720	-		PFLU_RS06520	0.15	-1.8
1,457,720	-		PFLU_RS06520	0.15	+0.0
1,457,720	-		PFLU_RS06520	0.15	-1.0
1,457,720	-		PFLU_RS06520	0.15	+0.1
1,457,720	-		PFLU_RS06520	0.15	-1.6
1,457,720	-		PFLU_RS06520	0.15	-2.3
1,457,734	+		PFLU_RS06520	0.18	-0.5
1,457,734	+		PFLU_RS06520	0.18	-0.0
1,457,734	+		PFLU_RS06520	0.18	-1.0
1,457,734	+		PFLU_RS06520	0.18	-1.3
1,457,735	-		PFLU_RS06520	0.18	-1.5
1,457,735	-		PFLU_RS06520	0.18	-1.7
1,457,735	-		PFLU_RS06520	0.18	-1.0
1,457,738	+		PFLU_RS06520	0.18	-0.5
1,457,738	+		PFLU_RS06520	0.18	-2.4
1,457,738	+		PFLU_RS06520	0.18	+0.8
1,457,738	+		PFLU_RS06520	0.18	-1.9
1,457,739	-		PFLU_RS06520	0.19	-1.2
1,457,739	-		PFLU_RS06520	0.19	+0.2
1,457,739	-		PFLU_RS06520	0.19	-0.3
1,457,739	-		PFLU_RS06520	0.19	-1.3
1,457,739	-		PFLU_RS06520	0.19	+0.1
1,457,739	-		PFLU_RS06520	0.19	-0.2
1,457,871	-		PFLU_RS06520	0.45	-1.9
1,457,997	+		PFLU_RS06520	0.70	+0.0
1,457,997	+		PFLU_RS06520	0.70	-1.2
1,457,997	+		PFLU_RS06520	0.70	-1.0
1,457,997	+		PFLU_RS06520	0.70	+2.0
1,457,997	+		PFLU_RS06520	0.70	+1.7
1,457,997	+		PFLU_RS06520	0.70	-0.5
1,457,998	-		PFLU_RS06520	0.71	-2.3
1,457,998	-		PFLU_RS06520	0.71	-0.6
1,457,998	-		PFLU_RS06520	0.71	+1.0
1,457,998	-		PFLU_RS06520	0.71	+0.1
1,457,998	-		PFLU_RS06520	0.71	+4.0
1,457,998	-		PFLU_RS06520	0.71	-0.3
1,457,998	-		PFLU_RS06520	0.71	-1.5
1,457,998	-		PFLU_RS06520	0.71	-1.7
1,458,119	+				-2.0
1,458,119	+				+0.8
1,458,120	-				-0.2
1,458,120	-				-0.2
1,458,120	-				+0.9
1,458,120	-				+2.4
1,458,131	+				-1.8
1,458,132	-				+0.6
1,458,167	+				-0.5
1,458,175	-				-1.7
1,458,247	+				-0.3
1,458,290	+				+0.4
1,458,290	+				-0.3
1,458,290	+				-2.8
1,458,291	-				+1.1
1,458,291	-				-0.8
1,458,291	-				+2.9
1,458,291	-				+0.2
1,458,356	+				+2.4
1,458,356	+				-1.6
1,458,356	+				-0.3
1,458,357	-				-0.2
1,458,357	-				-0.9
1,458,357	-				-0.8
1,458,380	+				+1.2
1,458,380	+				-1.3
1,458,381	-				-0.8
1,458,381	-				-1.6
1,458,381	-				-0.8
1,458,381	-				+3.1
1,458,482	-		PFLU_RS06525	0.21	+0.6
1,458,526	+		PFLU_RS06525	0.28	+1.5
1,458,526	+		PFLU_RS06525	0.28	-0.3
1,458,527	-		PFLU_RS06525	0.28	-1.5
1,458,527	-		PFLU_RS06525	0.28	+2.2
1,458,527	-		PFLU_RS06525	0.28	-0.2
1,458,585	+		PFLU_RS06525	0.36	-2.5
1,458,585	+		PFLU_RS06525	0.36	+1.0
1,458,585	+		PFLU_RS06525	0.36	+0.4
1,458,586	-		PFLU_RS06525	0.36	-0.5
1,458,586	-		PFLU_RS06525	0.36	+0.4
1,458,617	+		PFLU_RS06525	0.41	+2.8
1,458,617	+		PFLU_RS06525	0.41	-0.6
1,458,617	+		PFLU_RS06525	0.41	-0.6
1,458,617	+		PFLU_RS06525	0.41	+0.6
1,458,617	+		PFLU_RS06525	0.41	+1.7
1,458,617	+		PFLU_RS06525	0.41	-1.6
1,458,617	+		PFLU_RS06525	0.41	+2.0
1,458,617	+		PFLU_RS06525	0.41	-1.7
1,458,617	+		PFLU_RS06525	0.41	-1.7
1,458,617	+		PFLU_RS06525	0.41	-0.2
1,458,617	+		PFLU_RS06525	0.41	-1.0
1,458,617	+		PFLU_RS06525	0.41	+0.8
1,458,617	+		PFLU_RS06525	0.41	-1.6
1,458,617	+		PFLU_RS06525	0.41	-1.9
1,458,617	+		PFLU_RS06525	0.41	+0.2
1,458,617	+		PFLU_RS06525	0.41	+1.1
1,458,617	+		PFLU_RS06525	0.41	-0.3
1,458,617	+		PFLU_RS06525	0.41	-1.7
1,458,617	+		PFLU_RS06525	0.41	+0.1
1,458,618	-		PFLU_RS06525	0.41	+1.7
1,458,618	-		PFLU_RS06525	0.41	+1.4
1,458,618	-		PFLU_RS06525	0.41	-3.3
1,458,618	-		PFLU_RS06525	0.41	-1.9
1,458,618	-		PFLU_RS06525	0.41	+0.0
1,458,618	-		PFLU_RS06525	0.41	-0.5
1,458,618	-		PFLU_RS06525	0.41	+0.6
1,458,618	-		PFLU_RS06525	0.41	+1.1
1,458,618	-		PFLU_RS06525	0.41	+2.3
1,458,618	-		PFLU_RS06525	0.41	+1.0
1,458,618	-		PFLU_RS06525	0.41	+0.0
1,458,618	-		PFLU_RS06525	0.41	+0.3
1,458,748	-		PFLU_RS06525	0.59	-0.9
1,458,847	+		PFLU_RS06525	0.74	-0.6
1,458,847	+		PFLU_RS06525	0.74	+0.6
1,458,847	+		PFLU_RS06525	0.74	-1.3
1,458,847	+		PFLU_RS06525	0.74	-0.3
1,458,847	+		PFLU_RS06525	0.74	+0.9
1,458,847	+		PFLU_RS06525	0.74	-0.2
1,458,847	+		PFLU_RS06525	0.74	+1.3
1,458,847	+		PFLU_RS06525	0.74	-2.3
1,458,847	+		PFLU_RS06525	0.74	-2.1
1,458,847	+		PFLU_RS06525	0.74	+3.6
1,458,847	+		PFLU_RS06525	0.74	+0.3
1,458,847	+		PFLU_RS06525	0.74	+2.1
1,458,848	-		PFLU_RS06525	0.74	-0.5
1,458,848	-		PFLU_RS06525	0.74	-0.9
1,458,848	-		PFLU_RS06525	0.74	+0.8
1,458,848	-		PFLU_RS06525	0.74	-1.9
1,458,848	-		PFLU_RS06525	0.74	-1.1
1,458,848	-		PFLU_RS06525	0.74	+0.3
1,458,848	-		PFLU_RS06525	0.74	-1.7
1,458,848	-		PFLU_RS06525	0.74	+1.0
1,458,848	-		PFLU_RS06525	0.74	+1.0
1,458,848	-		PFLU_RS06525	0.74	+2.6
1,458,848	-		PFLU_RS06525	0.74	+0.9
1,458,848	-		PFLU_RS06525	0.74	-0.5
1,458,848	-		PFLU_RS06525	0.74	+0.5
1,458,848	-		PFLU_RS06525	0.74	+0.4
1,458,848	-		PFLU_RS06525	0.74	-2.3
1,458,848	-		PFLU_RS06525	0.74	+1.5
1,458,848	-		PFLU_RS06525	0.74	-1.1
1,458,893	-		PFLU_RS06525	0.80	-0.5
1,458,893	-		PFLU_RS06525	0.80	+2.2
1,459,083	+				-0.0
1,459,083	+				+0.4
1,459,083	+				-1.0
1,459,083	+				-0.6
1,459,084	-				-0.4
1,459,084	-				+2.0
1,459,084	-				+2.1
1,459,084	-				+1.5
1,459,084	-				+0.2
1,459,084	-				-0.6
1,459,086	+				-2.1
1,459,086	+				+2.3
1,459,087	-				-1.9
1,459,087	-				+0.4
1,459,130	+				-0.6
1,459,131	-				+0.0
1,459,159	+				-0.0
1,459,159	+				+0.2
1,459,159	+				-1.8
1,459,160	-				-0.2
1,459,160	-				+0.9
1,459,182	+				-1.8
1,459,183	-				-0.7
1,459,183	-				-1.8
1,459,183	-				+1.3
1,459,286	+		PFLU_RS06530	0.14	+1.3
1,459,287	-		PFLU_RS06530	0.14	-0.2
1,459,287	-		PFLU_RS06530	0.14	+0.3
1,459,595	-		PFLU_RS06530	0.55	-1.5
1,459,595	-		PFLU_RS06530	0.55	-1.3
1,459,672	-		PFLU_RS06530	0.65	+2.4
1,459,840	+		PFLU_RS06530	0.87	-1.5
1,459,841	-		PFLU_RS06530	0.87	+1.0
1,459,933	+				-0.6
1,459,933	+				-0.3
1,459,934	-				+0.8
1,459,934	-				+1.0
1,460,026	+				-2.2
1,460,026	+				+0.8
1,460,026	+				+0.4
1,460,026	+				-1.0
1,460,027	-				-0.6
1,460,027	-				-1.2