Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21920

Experiment: L-Isoleucine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (C)
4,933,062	+		PFLU_RS21910	0.89	-1.6
4,933,062	+		PFLU_RS21910	0.89	+0.3
4,933,062	+		PFLU_RS21910	0.89	+0.6
4,933,062	+		PFLU_RS21910	0.89	-0.2
4,933,062	+		PFLU_RS21910	0.89	+1.2
4,933,062	+		PFLU_RS21910	0.89	+0.0
4,933,062	+		PFLU_RS21910	0.89	+1.4
4,933,062	+		PFLU_RS21910	0.89	+0.9
4,933,062	+		PFLU_RS21910	0.89	-0.0
4,933,062	+		PFLU_RS21910	0.89	-0.9
4,933,062	+		PFLU_RS21910	0.89	-0.9
4,933,062	+		PFLU_RS21910	0.89	-0.3
4,933,062	+		PFLU_RS21910	0.89	-1.1
4,933,062	+		PFLU_RS21910	0.89	-1.1
4,933,062	+		PFLU_RS21910	0.89	+1.5
4,933,063	-		PFLU_RS21910	0.89	-3.0
4,933,063	-		PFLU_RS21910	0.89	+0.9
4,933,063	-		PFLU_RS21910	0.89	-0.3
4,933,063	-		PFLU_RS21910	0.89	+1.3
4,933,063	-		PFLU_RS21910	0.89	+1.1
4,933,063	-		PFLU_RS21910	0.89	-1.3
4,933,063	-		PFLU_RS21910	0.89	+1.2
4,933,063	-		PFLU_RS21910	0.89	+0.5
4,933,063	-		PFLU_RS21910	0.89	+3.1
4,933,063	-		PFLU_RS21910	0.89	-1.5
4,933,063	-		PFLU_RS21910	0.89	-0.3
4,933,063	-		PFLU_RS21910	0.89	+0.2
4,933,063	-		PFLU_RS21910	0.89	+2.3
4,933,065	+		PFLU_RS21910	0.89	+1.7
4,933,065	+		PFLU_RS21910	0.89	+0.0
4,933,065	+		PFLU_RS21910	0.89	-1.7
4,933,089	+				+0.6
4,933,089	+				+1.1
4,933,089	+				+1.0
4,933,114	-				+0.1
4,933,114	-				+0.9
4,933,176	+				+0.2
4,933,176	+				-1.5
4,933,176	+				+1.1
4,933,177	-				-0.0
4,933,194	-				-0.7
4,933,194	-				+1.1
4,933,211	+				+0.6
4,933,211	+				-0.5
4,933,212	-				+0.7
4,933,212	-				-0.1
4,933,212	-				+2.0
4,933,212	-				+2.2
4,933,212	-				-1.1
4,933,239	+				-0.5
4,933,256	+				-1.5
4,933,256	+				-0.4
4,933,256	+				+2.1
4,933,257	-				+0.3
4,933,257	-				-1.9
4,933,272	+				+2.3
4,933,272	+				+0.3
4,933,272	+				+0.7
4,933,273	-				+0.3
4,933,273	-				+1.2
4,933,273	-				+1.4
4,933,273	-				+0.8
4,933,273	-				+1.6
4,933,273	-				-1.8
4,933,315	-				-1.5
4,933,315	-				-1.1
4,933,315	-				-0.2
4,933,315	-				+0.3
4,933,315	-				-1.3
4,933,315	-				+0.6
4,933,315	-				-0.1
4,933,544	+		PFLU_RS21915	0.10	-1.1
4,933,544	+		PFLU_RS21915	0.10	+1.0
4,933,544	+		PFLU_RS21915	0.10	-0.2
4,933,544	+		PFLU_RS21915	0.10	-1.6
4,933,544	+		PFLU_RS21915	0.10	+2.1
4,933,544	+		PFLU_RS21915	0.10	-0.6
4,933,545	-		PFLU_RS21915	0.10	-2.1
4,933,545	-		PFLU_RS21915	0.10	+0.5
4,933,545	-		PFLU_RS21915	0.10	+1.5
4,933,545	-		PFLU_RS21915	0.10	-1.9
4,933,545	-		PFLU_RS21915	0.10	-0.7
4,933,545	-		PFLU_RS21915	0.10	-1.5
4,933,545	-		PFLU_RS21915	0.10	-1.8
4,933,545	-		PFLU_RS21915	0.10	+0.3
4,933,950	+				-0.9
4,933,962	-				+2.1
4,933,973	-				+6.5
4,933,976	+				-0.0
4,933,976	+				-1.1
4,933,976	+				+1.3
4,933,977	-				+3.7
4,933,977	-				+3.9
4,933,977	-				+2.7
4,933,980	-				+3.7
4,933,980	-				+2.7
4,933,987	+				-2.0
4,933,987	+				-1.3
4,933,987	+				-3.1
4,933,987	+				-0.1
4,933,988	-				+2.6
4,933,988	-				+3.1
4,933,988	-				+3.1
4,933,988	-				+2.7
4,934,006	+				+1.9
4,934,020	+				-1.3
4,934,020	+				+2.3
4,934,020	+				+0.4
4,934,020	+				-1.7
4,934,020	+				-2.2
4,934,020	+				+0.5
4,934,020	+				+0.7
4,934,020	+				+1.1
4,934,020	+				+0.1
4,934,020	+				-0.5
4,934,020	+				+0.9
4,934,020	+				-0.5
4,934,020	+				+0.6
4,934,020	+				-0.1
4,934,020	+				+1.6
4,934,020	+				-1.3
4,934,021	-				-1.9
4,934,021	-				-0.9
4,934,021	-				-0.5
4,934,021	-				+2.3
4,934,021	-				+0.0
4,934,021	-				+1.0
4,934,021	-				+0.8
4,934,021	-				+1.9
4,934,021	-				+1.3
4,934,021	-				-0.5
4,934,021	-				+1.4
4,934,021	-				-0.2
4,934,021	-				-0.9
4,934,021	-				-0.4
4,934,021	-				+1.3
4,934,021	-				+2.8
4,934,021	-				-0.5
4,934,021	-				+2.2
4,934,021	-				+0.4
4,934,021	-				-0.5
4,934,021	-				+1.3
4,934,021	-				+2.1
4,934,021	-				-1.8
4,934,021	-				+1.6
4,934,021	-				-0.7
4,934,021	-				+1.5
4,934,021	-				+1.9
4,934,021	-				-2.5
4,934,024	+				+2.1
4,934,024	+				-1.8
4,934,024	+				-0.2
4,934,024	+				-1.1
4,934,024	+				-2.9
4,934,024	+				+0.9
4,934,025	-				+1.7
4,934,025	-				+0.6
4,934,025	-				+0.5
4,934,025	-				+0.7
4,934,025	-				-1.6
4,934,025	-				+0.7
4,934,035	+				-0.9
4,934,035	+				-1.8
4,934,035	+				+0.3
4,934,035	+				-0.7
4,934,036	-				+2.8
4,934,036	-				+1.9
4,934,036	-				+2.6
4,934,046	-				+3.3
4,934,046	-				+1.7
4,934,057	+				+0.9
4,934,057	+				-0.7
4,934,058	-				+2.4
4,934,089	+				+0.9
4,934,089	+				+1.3
4,934,090	-				+3.0
4,934,090	-				+1.9
4,934,090	-				+1.0
4,934,096	+				-2.5
4,934,096	+				-1.1
4,934,096	+				-0.9
4,934,097	-				+1.0
4,934,097	-				+0.9
4,934,097	-				+1.8
4,934,097	-				+3.3
4,934,124	+				-0.9
4,934,125	-				+1.8
4,934,125	-				+1.9
4,934,125	-				+1.2
4,934,273	+		PFLU_RS21920	0.10	+0.9
4,934,274	-		PFLU_RS21920	0.10	+1.2
4,934,526	+		PFLU_RS21920	0.22	+0.5
4,934,526	+		PFLU_RS21920	0.22	+0.3
4,934,527	-		PFLU_RS21920	0.22	-0.5
4,934,527	-		PFLU_RS21920	0.22	+1.9
4,934,527	-		PFLU_RS21920	0.22	-0.5
4,934,531	+		PFLU_RS21920	0.22	-0.5
4,934,531	+		PFLU_RS21920	0.22	-0.9
4,934,531	+		PFLU_RS21920	0.22	-0.5
4,934,531	+		PFLU_RS21920	0.22	+0.9
4,934,531	+		PFLU_RS21920	0.22	-0.1
4,934,532	-		PFLU_RS21920	0.22	+2.6
4,934,831	+		PFLU_RS21920	0.36	-0.1
4,934,831	+		PFLU_RS21920	0.36	+1.9
4,934,832	-		PFLU_RS21920	0.36	-0.5
4,934,887	+		PFLU_RS21920	0.39	-1.9
4,934,887	+		PFLU_RS21920	0.39	+1.7
4,934,888	-		PFLU_RS21920	0.39	+3.8
4,934,888	-		PFLU_RS21920	0.39	+0.3
4,934,888	-		PFLU_RS21920	0.39	+1.7
4,934,890	+		PFLU_RS21920	0.39	+1.5
4,934,890	+		PFLU_RS21920	0.39	-1.1
4,934,890	+		PFLU_RS21920	0.39	+2.3
4,934,890	+		PFLU_RS21920	0.39	-1.6
4,934,890	+		PFLU_RS21920	0.39	-0.5
4,934,890	+		PFLU_RS21920	0.39	+1.2
4,934,890	+		PFLU_RS21920	0.39	+0.5
4,934,890	+		PFLU_RS21920	0.39	+1.0
4,934,890	+		PFLU_RS21920	0.39	-0.4
4,934,890	+		PFLU_RS21920	0.39	+2.2
4,934,890	+		PFLU_RS21920	0.39	+0.9
4,934,890	+		PFLU_RS21920	0.39	+3.0
4,934,890	+		PFLU_RS21920	0.39	-2.2
4,934,890	+		PFLU_RS21920	0.39	-1.6
4,934,890	+		PFLU_RS21920	0.39	-0.7
4,934,890	+		PFLU_RS21920	0.39	+0.7
4,934,890	+		PFLU_RS21920	0.39	+0.1
4,934,890	+		PFLU_RS21920	0.39	-1.5
4,934,890	+		PFLU_RS21920	0.39	-0.5
4,934,890	+		PFLU_RS21920	0.39	-0.7
4,934,890	+		PFLU_RS21920	0.39	+3.5
4,934,890	+		PFLU_RS21920	0.39	-2.1
4,934,890	+		PFLU_RS21920	0.39	+1.9
4,934,890	+		PFLU_RS21920	0.39	-1.7
4,934,890	+		PFLU_RS21920	0.39	-0.1
4,934,890	+		PFLU_RS21920	0.39	+0.7
4,934,890	+		PFLU_RS21920	0.39	+1.2
4,934,890	+		PFLU_RS21920	0.39	-0.1
4,934,890	+		PFLU_RS21920	0.39	-0.5
4,934,890	+		PFLU_RS21920	0.39	+0.7
4,934,890	+		PFLU_RS21920	0.39	+1.9
4,934,890	+		PFLU_RS21920	0.39	-0.6
4,934,890	+		PFLU_RS21920	0.39	+0.3
4,934,890	+		PFLU_RS21920	0.39	-0.9
4,934,890	+		PFLU_RS21920	0.39	-1.8
4,934,890	+		PFLU_RS21920	0.39	+2.4
4,934,890	+		PFLU_RS21920	0.39	-1.8
4,934,890	+		PFLU_RS21920	0.39	-0.5
4,934,890	+		PFLU_RS21920	0.39	+4.7
4,934,891	-		PFLU_RS21920	0.39	-1.3
4,934,891	-		PFLU_RS21920	0.39	+1.6
4,934,891	-		PFLU_RS21920	0.39	+0.4
4,934,891	-		PFLU_RS21920	0.39	+0.3
4,934,891	-		PFLU_RS21920	0.39	+1.3
4,934,891	-		PFLU_RS21920	0.39	+0.1
4,934,891	-		PFLU_RS21920	0.39	-1.2
4,934,891	-		PFLU_RS21920	0.39	+0.1
4,934,891	-		PFLU_RS21920	0.39	-0.1
4,934,891	-		PFLU_RS21920	0.39	+3.5
4,934,891	-		PFLU_RS21920	0.39	-0.3
4,934,891	-		PFLU_RS21920	0.39	-1.6
4,934,891	-		PFLU_RS21920	0.39	+1.7
4,934,891	-		PFLU_RS21920	0.39	+1.0
4,934,891	-		PFLU_RS21920	0.39	+1.4
4,934,891	-		PFLU_RS21920	0.39	+0.9
4,934,891	-		PFLU_RS21920	0.39	+1.9
4,934,891	-		PFLU_RS21920	0.39	+0.9
4,934,891	-		PFLU_RS21920	0.39	-0.0
4,934,891	-		PFLU_RS21920	0.39	-2.1
4,934,891	-		PFLU_RS21920	0.39	+1.2
4,934,891	-		PFLU_RS21920	0.39	+0.4
4,934,891	-		PFLU_RS21920	0.39	-0.6
4,934,891	-		PFLU_RS21920	0.39	+1.6
4,934,891	-		PFLU_RS21920	0.39	+0.3
4,934,891	-		PFLU_RS21920	0.39	-1.1
4,934,891	-		PFLU_RS21920	0.39	-1.7
4,934,891	-		PFLU_RS21920	0.39	+1.5
4,934,891	-		PFLU_RS21920	0.39	+0.9
4,934,891	-		PFLU_RS21920	0.39	+1.4
4,934,891	-		PFLU_RS21920	0.39	-0.5
4,934,891	-		PFLU_RS21920	0.39	+2.4
4,934,891	-		PFLU_RS21920	0.39	-2.3
4,934,891	-		PFLU_RS21920	0.39	+2.9
4,934,891	-		PFLU_RS21920	0.39	+0.7
4,934,891	-		PFLU_RS21920	0.39	+0.7
4,934,891	-		PFLU_RS21920	0.39	-0.6
4,934,891	-		PFLU_RS21920	0.39	+0.8
4,934,891	-		PFLU_RS21920	0.39	+2.1
4,934,891	-		PFLU_RS21920	0.39	-0.7
4,934,891	-		PFLU_RS21920	0.39	+1.9
4,934,891	-		PFLU_RS21920	0.39	+1.7
4,934,891	-		PFLU_RS21920	0.39	-0.1
4,934,891	-		PFLU_RS21920	0.39	-1.3
4,934,915	+		PFLU_RS21920	0.40	+1.9
4,934,933	+		PFLU_RS21920	0.41	-1.7
4,934,933	+		PFLU_RS21920	0.41	-1.0
4,934,934	-		PFLU_RS21920	0.41	-0.3
4,934,934	-		PFLU_RS21920	0.41	+0.5
4,934,934	-		PFLU_RS21920	0.41	+1.3
4,934,934	-		PFLU_RS21920	0.41	-0.1
4,934,937	+		PFLU_RS21920	0.41	+0.2
4,934,938	-		PFLU_RS21920	0.41	+1.3
4,935,041	+		PFLU_RS21920	0.46	+1.0
4,935,041	+		PFLU_RS21920	0.46	+1.2
4,935,041	+		PFLU_RS21920	0.46	+0.7
4,935,042	-		PFLU_RS21920	0.46	+0.5
4,935,188	+		PFLU_RS21920	0.53	+0.9
4,935,188	+		PFLU_RS21920	0.53	+0.9
4,935,188	+		PFLU_RS21920	0.53	-1.3
4,935,189	-		PFLU_RS21920	0.53	+0.3
4,935,189	-		PFLU_RS21920	0.53	+1.9
4,935,245	+		PFLU_RS21920	0.56	+0.7
4,935,245	+		PFLU_RS21920	0.56	-2.5
4,935,245	+		PFLU_RS21920	0.56	+1.7
4,935,245	+		PFLU_RS21920	0.56	+1.3
4,935,245	+		PFLU_RS21920	0.56	+0.5
4,935,245	+		PFLU_RS21920	0.56	-0.5
4,935,245	+		PFLU_RS21920	0.56	-1.9
4,935,245	+		PFLU_RS21920	0.56	+0.6
4,935,246	-		PFLU_RS21920	0.56	-0.0
4,935,246	-		PFLU_RS21920	0.56	-1.7
4,935,246	-		PFLU_RS21920	0.56	+3.0
4,935,248	+		PFLU_RS21920	0.56	-1.1
4,935,248	+		PFLU_RS21920	0.56	+1.1
4,935,248	+		PFLU_RS21920	0.56	-0.9
4,935,248	+		PFLU_RS21920	0.56	+0.8
4,935,248	+		PFLU_RS21920	0.56	-0.5
4,935,248	+		PFLU_RS21920	0.56	+1.0
4,935,248	+		PFLU_RS21920	0.56	-0.9
4,935,248	+		PFLU_RS21920	0.56	-2.2
4,935,248	+		PFLU_RS21920	0.56	-1.3
4,935,248	+		PFLU_RS21920	0.56	+0.1
4,935,248	+		PFLU_RS21920	0.56	-0.6
4,935,248	+		PFLU_RS21920	0.56	-0.3
4,935,249	-		PFLU_RS21920	0.56	+2.8
4,935,249	-		PFLU_RS21920	0.56	-0.9
4,935,249	-		PFLU_RS21920	0.56	-0.1
4,935,249	-		PFLU_RS21920	0.56	+0.7
4,935,276	+		PFLU_RS21920	0.57	+1.4
4,935,277	-		PFLU_RS21920	0.57	+2.0
4,935,277	-		PFLU_RS21920	0.57	-2.5
4,935,277	-		PFLU_RS21920	0.57	+0.9
4,935,277	-		PFLU_RS21920	0.57	+0.3
4,935,394	-		PFLU_RS21920	0.63	+1.7
4,935,410	+		PFLU_RS21920	0.64	+0.9
4,935,482	+		PFLU_RS21920	0.67	+2.3
4,935,482	+		PFLU_RS21920	0.67	-1.0
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4,935,483	-		PFLU_RS21920	0.67	-0.4
4,935,483	-		PFLU_RS21920	0.67	-0.1
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4,935,570	+		PFLU_RS21920	0.71	-1.5
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4,935,571	-		PFLU_RS21920	0.71	-0.7
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4,936,184	+				+2.2
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4,936,185	-				-2.1
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4,936,185	-				-1.1
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4,936,187	-				+1.5
4,936,187	-				-3.0
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4,936,187	-				+2.0
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4,936,187	-				-0.3
4,936,187	-				-1.1
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4,936,187	-				-1.1
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4,936,187	-				-0.0
4,936,187	-				-1.3
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4,936,187	-				+1.2
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4,936,187	-				+1.1
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4,936,320	-				-0.5
4,936,320	-				-1.3
4,936,368	-				+2.9
4,936,371	+				+1.1
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4,936,372	-				+1.1
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4,936,372	-				+2.1
4,936,372	-				+2.0
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4,936,385	+				-0.4
4,936,385	+				+3.0
4,936,385	+				-1.3
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4,936,386	-				+0.5
4,936,386	-				+0.4
4,936,386	-				+1.3
4,936,421	+				+0.7
4,936,422	-				-0.1
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4,936,449	+				+1.7
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4,936,534	+		PFLU_RS21925	0.13	-0.5
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4,936,534	+		PFLU_RS21925	0.13	+1.7
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4,936,535	-		PFLU_RS21925	0.13	+3.2
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4,936,535	-		PFLU_RS21925	0.13	+2.3
4,936,535	-		PFLU_RS21925	0.13	+3.5
4,936,633	+		PFLU_RS21925	0.30	+4.3
4,936,634	-		PFLU_RS21925	0.30	+0.6
4,936,959	-		PFLU_RS21925	0.85	-0.5
4,936,987	+		PFLU_RS21925	0.90	+3.3
4,936,987	+		PFLU_RS21925	0.90	-0.7
4,936,987	+		PFLU_RS21925	0.90	+2.2
4,936,988	-				-0.1
4,937,094	+				-2.1
4,937,094	+				+1.3
4,937,125	+		PFLU_RS21930	0.15	-1.6