Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29085

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
6,465,772	+				-0.7
6,465,772	+				-0.6
6,465,773	-				+1.2
6,465,773	-				+0.4
6,465,791	-				+0.2
6,465,809	-				+1.8
6,465,809	-				+0.2
6,465,809	-				+1.3
6,465,809	-				+1.7
6,465,809	-				-2.1
6,465,833	+				+1.5
6,465,847	+				+0.9
6,465,848	-				+0.9
6,465,848	-				+1.2
6,465,848	-				-0.3
6,465,851	+				+1.7
6,465,851	+				+0.3
6,465,851	+				+1.4
6,465,851	+				+1.3
6,465,852	-				+0.6
6,465,852	-				-1.8
6,465,860	+				-1.3
6,465,868	+				+0.4
6,465,955	+		PFLU_RS29080	0.20	+1.2
6,465,955	+		PFLU_RS29080	0.20	+2.4
6,465,955	+		PFLU_RS29080	0.20	-0.2
6,465,955	+		PFLU_RS29080	0.20	-1.3
6,465,955	+		PFLU_RS29080	0.20	-1.0
6,465,955	+		PFLU_RS29080	0.20	+0.5
6,465,955	+		PFLU_RS29080	0.20	+0.6
6,465,955	+		PFLU_RS29080	0.20	-0.3
6,465,955	+		PFLU_RS29080	0.20	+0.1
6,465,955	+		PFLU_RS29080	0.20	+1.2
6,465,955	+		PFLU_RS29080	0.20	+5.8
6,465,955	+		PFLU_RS29080	0.20	-1.8
6,465,955	+		PFLU_RS29080	0.20	+0.3
6,465,955	+		PFLU_RS29080	0.20	+1.5
6,465,955	+		PFLU_RS29080	0.20	-0.7
6,465,955	+		PFLU_RS29080	0.20	+2.2
6,465,955	+		PFLU_RS29080	0.20	+0.2
6,465,955	+		PFLU_RS29080	0.20	+1.1
6,465,955	+		PFLU_RS29080	0.20	-2.8
6,465,955	+		PFLU_RS29080	0.20	+0.4
6,465,956	-		PFLU_RS29080	0.20	+1.3
6,465,956	-		PFLU_RS29080	0.20	-1.9
6,465,956	-		PFLU_RS29080	0.20	-1.5
6,465,956	-		PFLU_RS29080	0.20	-0.1
6,465,956	-		PFLU_RS29080	0.20	-2.0
6,465,956	-		PFLU_RS29080	0.20	-1.3
6,465,956	-		PFLU_RS29080	0.20	-1.1
6,465,956	-		PFLU_RS29080	0.20	+0.4
6,465,956	-		PFLU_RS29080	0.20	-0.6
6,465,956	-		PFLU_RS29080	0.20	-0.2
6,465,956	-		PFLU_RS29080	0.20	+0.5
6,465,956	-		PFLU_RS29080	0.20	-0.4
6,465,956	-		PFLU_RS29080	0.20	-2.3
6,465,956	-		PFLU_RS29080	0.20	-1.1
6,465,956	-		PFLU_RS29080	0.20	+1.1
6,465,956	-		PFLU_RS29080	0.20	+0.6
6,465,999	+		PFLU_RS29080	0.26	+0.8
6,465,999	+		PFLU_RS29080	0.26	+0.9
6,465,999	+		PFLU_RS29080	0.26	-2.0
6,465,999	+		PFLU_RS29080	0.26	+1.3
6,465,999	+		PFLU_RS29080	0.26	+1.8
6,465,999	+		PFLU_RS29080	0.26	+4.1
6,465,999	+		PFLU_RS29080	0.26	-1.7
6,465,999	+		PFLU_RS29080	0.26	+2.0
6,465,999	+		PFLU_RS29080	0.26	+0.3
6,465,999	+		PFLU_RS29080	0.26	+0.6
6,466,000	-		PFLU_RS29080	0.26	-1.2
6,466,000	-		PFLU_RS29080	0.26	-0.3
6,466,017	+		PFLU_RS29080	0.29	+1.2
6,466,017	+		PFLU_RS29080	0.29	+0.5
6,466,018	-		PFLU_RS29080	0.29	+0.9
6,466,018	-		PFLU_RS29080	0.29	-1.1
6,466,024	+		PFLU_RS29080	0.30	-1.3
6,466,024	+		PFLU_RS29080	0.30	-0.3
6,466,024	+		PFLU_RS29080	0.30	+1.3
6,466,024	+		PFLU_RS29080	0.30	-2.8
6,466,024	+		PFLU_RS29080	0.30	+0.9
6,466,025	-		PFLU_RS29080	0.30	+2.9
6,466,025	-		PFLU_RS29080	0.30	-2.7
6,466,025	-		PFLU_RS29080	0.30	+0.6
6,466,025	-		PFLU_RS29080	0.30	+2.9
6,466,025	-		PFLU_RS29080	0.30	-0.9
6,466,025	-		PFLU_RS29080	0.30	+1.2
6,466,025	-		PFLU_RS29080	0.30	-2.3
6,466,113	-		PFLU_RS29080	0.42	+0.4
6,466,151	+		PFLU_RS29080	0.48	-1.2
6,466,191	-		PFLU_RS29080	0.54	+0.6
6,466,191	-		PFLU_RS29080	0.54	-1.2
6,466,244	+		PFLU_RS29080	0.61	+2.7
6,466,290	-		PFLU_RS29080	0.68	-1.5
6,466,332	+		PFLU_RS29080	0.74	+3.3
6,466,341	+		PFLU_RS29080	0.75	-0.1
6,466,342	-		PFLU_RS29080	0.75	+0.1
6,466,342	-		PFLU_RS29080	0.75	+2.3
6,466,389	-		PFLU_RS29080	0.82	-1.2
6,466,389	-		PFLU_RS29080	0.82	+1.6
6,466,389	-		PFLU_RS29080	0.82	-0.1
6,466,488	+				+1.1
6,466,488	+				-0.4
6,466,488	+				+1.7
6,466,488	+				+1.2
6,466,488	+				+1.2
6,466,488	+				+2.0
6,466,488	+				-1.1
6,466,489	-				-1.8
6,466,489	-				-2.3
6,466,489	-				+0.8
6,466,489	-				+3.2
6,466,489	-				+1.3
6,466,490	+				+1.7
6,466,490	+				+0.9
6,466,491	-				-1.5
6,466,491	-				-0.3
6,466,491	-				-0.9
6,466,492	+				+0.9
6,466,492	+				+0.3
6,466,492	+				+1.7
6,466,493	-				+1.3
6,466,493	-				+0.5
6,466,522	-				-1.1
6,466,580	+				-0.8
6,466,605	+				+1.4
6,466,605	+				+0.0
6,466,606	-				+1.9
6,466,609	+				+0.8
6,466,609	+				+0.1
6,466,609	+				-1.1
6,466,609	+				-1.6
6,466,610	-				-0.8
6,466,610	-				+0.9
6,466,610	-				-2.2
6,466,610	-				+0.2
6,466,613	+				-1.8
6,466,613	+				+0.4
6,466,614	-				+1.5
6,466,614	-				+0.9
6,466,645	+				-1.6
6,466,646	-				-0.9
6,466,649	+				-0.1
6,466,649	+				+0.2
6,466,649	+				+0.8
6,466,649	+				-2.0
6,466,649	+				-0.5
6,466,649	+				-2.6
6,466,650	-				-0.5
6,466,650	-				+0.1
6,466,650	-				+1.5
6,466,650	-				-2.2
6,466,650	-				-1.2
6,466,650	-				-0.8
6,466,650	-				+1.2
6,466,650	-				-2.5
6,466,655	+				-1.4
6,466,655	+				-0.1
6,466,656	-				-2.7
6,466,690	+				+2.9
6,466,690	+				-1.4
6,466,690	+				-2.1
6,466,690	+				+1.8
6,466,690	+				+1.3
6,466,690	+				+1.3
6,466,690	+				+1.4
6,466,690	+				+1.8
6,466,690	+				-0.6
6,466,690	+				-0.7
6,466,690	+				-1.3
6,466,690	+				-0.3
6,466,690	+				-2.4
6,466,691	-				-2.3
6,466,691	-				-0.3
6,466,755	+		PFLU_RS29085	0.16	+0.7
6,466,777	+		PFLU_RS29085	0.20	-1.3
6,466,777	+		PFLU_RS29085	0.20	+2.5
6,466,777	+		PFLU_RS29085	0.20	-0.4
6,466,777	+		PFLU_RS29085	0.20	-0.6
6,466,777	+		PFLU_RS29085	0.20	+0.3
6,466,778	-		PFLU_RS29085	0.20	+1.0
6,466,778	-		PFLU_RS29085	0.20	+1.1
6,466,778	-		PFLU_RS29085	0.20	-0.0
6,466,778	-		PFLU_RS29085	0.20	+0.9
6,466,788	+		PFLU_RS29085	0.22	-1.3
6,466,805	+		PFLU_RS29085	0.24	+3.5
6,466,806	-		PFLU_RS29085	0.24	-1.1
6,466,830	+		PFLU_RS29085	0.28	-1.5
6,466,831	-		PFLU_RS29085	0.28	-0.5
6,466,831	-		PFLU_RS29085	0.28	+0.2
6,466,875	+		PFLU_RS29085	0.35	-2.1
6,466,875	+		PFLU_RS29085	0.35	+0.6
6,466,875	+		PFLU_RS29085	0.35	-0.5
6,466,876	-		PFLU_RS29085	0.35	+2.2
6,466,876	-		PFLU_RS29085	0.35	+0.7
6,466,876	-		PFLU_RS29085	0.35	-1.8
6,466,925	+		PFLU_RS29085	0.43	-0.1
6,466,935	+		PFLU_RS29085	0.44	-0.1
6,466,936	-		PFLU_RS29085	0.44	+1.7
6,466,944	+		PFLU_RS29085	0.45	-0.9
6,466,944	+		PFLU_RS29085	0.45	-0.1
6,466,944	+		PFLU_RS29085	0.45	+0.5
6,466,944	+		PFLU_RS29085	0.45	-1.1
6,466,944	+		PFLU_RS29085	0.45	+0.2
6,466,945	-		PFLU_RS29085	0.46	+0.2
6,466,945	-		PFLU_RS29085	0.46	+2.3
6,466,945	-		PFLU_RS29085	0.46	+1.5
6,466,945	-		PFLU_RS29085	0.46	-0.7
6,466,964	+		PFLU_RS29085	0.49	+0.2
6,466,964	+		PFLU_RS29085	0.49	-0.7
6,466,964	+		PFLU_RS29085	0.49	+2.9
6,466,964	+		PFLU_RS29085	0.49	+2.1
6,466,964	+		PFLU_RS29085	0.49	-1.1
6,466,964	+		PFLU_RS29085	0.49	-0.7
6,466,964	+		PFLU_RS29085	0.49	+0.1
6,466,964	+		PFLU_RS29085	0.49	+1.1
6,466,964	+		PFLU_RS29085	0.49	-1.1
6,466,964	+		PFLU_RS29085	0.49	+3.3
6,466,964	+		PFLU_RS29085	0.49	-0.1
6,466,964	+		PFLU_RS29085	0.49	+1.9
6,466,964	+		PFLU_RS29085	0.49	-0.4
6,466,964	+		PFLU_RS29085	0.49	+2.0
6,466,964	+		PFLU_RS29085	0.49	+2.5
6,466,964	+		PFLU_RS29085	0.49	-1.2
6,466,964	+		PFLU_RS29085	0.49	-2.1
6,466,964	+		PFLU_RS29085	0.49	-0.7
6,466,965	-		PFLU_RS29085	0.49	-1.4
6,466,965	-		PFLU_RS29085	0.49	+1.0
6,466,965	-		PFLU_RS29085	0.49	-0.1
6,466,965	-		PFLU_RS29085	0.49	-1.4
6,466,965	-		PFLU_RS29085	0.49	-1.5
6,466,965	-		PFLU_RS29085	0.49	-2.0
6,466,965	-		PFLU_RS29085	0.49	-1.7
6,466,965	-		PFLU_RS29085	0.49	+0.2
6,466,965	-		PFLU_RS29085	0.49	+0.2
6,466,965	-		PFLU_RS29085	0.49	+0.0
6,466,965	-		PFLU_RS29085	0.49	-0.3
6,466,965	-		PFLU_RS29085	0.49	+0.6
6,467,148	-		PFLU_RS29085	0.77	+0.3
6,467,176	-		PFLU_RS29085	0.81	+2.0
6,467,176	-		PFLU_RS29085	0.81	+2.3
6,467,200	-		PFLU_RS29085	0.85	+0.1
6,467,200	-		PFLU_RS29085	0.85	-0.6
6,467,200	-		PFLU_RS29085	0.85	-2.1
6,467,209	+		PFLU_RS29085	0.86	-1.2
6,467,209	+		PFLU_RS29085	0.86	+0.5
6,467,210	-		PFLU_RS29085	0.86	-0.9
6,467,210	-		PFLU_RS29085	0.86	-0.2
6,467,298	+				-2.3
6,467,301	+				+0.6
6,467,301	+				+2.3
6,467,301	+				+1.2
6,467,302	-				-1.8
6,467,316	+				+0.7
6,467,316	+				+1.3
6,467,316	+				+1.5
6,467,317	-				-1.3
6,467,357	+				-0.4
6,467,454	+				-2.4
6,467,464	+				-0.8
6,467,464	+				-1.1
6,467,518	+				-0.7
6,467,573	+				+2.9
6,467,573	+				-1.0
6,467,574	-				-0.1
6,467,596	+				+2.2
6,467,623	+				-1.0
6,467,623	+				-0.5
6,467,624	-				+2.7
6,467,624	-				+1.2
6,467,624	-				+1.5
6,467,624	-				+2.3
6,467,624	-				-0.2
6,467,624	-				-0.6
6,467,624	-				+1.3
6,467,628	+				-1.5
6,467,628	+				-1.0
6,467,628	+				+1.8
6,467,628	+				+0.9
6,467,628	+				-2.1
6,467,629	-				+1.3
6,467,629	-				+0.6
6,467,629	-				-2.3
6,467,632	+				-0.7
6,467,632	+				+1.5
6,467,655	+				-2.7
6,467,655	+				-0.1
6,467,655	+				-0.4
6,467,655	+				+0.5
6,467,655	+				+0.2
6,467,655	+				-0.0
6,467,655	+				+2.5
6,467,655	+				+1.3
6,467,655	+				+1.6
6,467,655	+				+2.9
6,467,656	-				+2.4
6,467,656	-				-2.3
6,467,656	-				+1.1
6,467,656	-				+0.1
6,467,656	-				+0.3
6,467,656	-				+0.3
6,467,656	-				-1.5
6,467,656	-				-1.7
6,467,656	-				-1.2
6,467,666	+				-0.9
6,468,076	+		PFLU_RS29090	0.26	+2.5
6,468,114	+		PFLU_RS29090	0.28	+1.2
6,468,114	+		PFLU_RS29090	0.28	+4.0
6,468,114	+		PFLU_RS29090	0.28	-0.7
6,468,114	+		PFLU_RS29090	0.28	-1.1
6,468,115	-		PFLU_RS29090	0.29	+4.0
6,468,115	-		PFLU_RS29090	0.29	+3.2
6,468,255	+		PFLU_RS29090	0.37	+1.3
6,468,256	-		PFLU_RS29090	0.37	+2.1
6,468,256	-		PFLU_RS29090	0.37	+0.5
6,468,256	-		PFLU_RS29090	0.37	+0.5
6,468,256	-		PFLU_RS29090	0.37	+1.9
6,468,268	-		PFLU_RS29090	0.38	+1.0
6,468,268	-		PFLU_RS29090	0.38	+1.3