Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29070

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
6,461,774	-		PFLU_RS29060	0.58	+1.1
6,461,795	+		PFLU_RS29060	0.61	-0.7
6,461,795	+		PFLU_RS29060	0.61	-1.4
6,461,795	+		PFLU_RS29060	0.61	-3.1
6,461,796	-		PFLU_RS29060	0.61	-0.8
6,461,796	-		PFLU_RS29060	0.61	+1.2
6,461,889	+		PFLU_RS29060	0.75	-0.6
6,461,889	+		PFLU_RS29060	0.75	+0.1
6,461,889	+		PFLU_RS29060	0.75	-1.8
6,461,889	+		PFLU_RS29060	0.75	-2.0
6,461,889	+		PFLU_RS29060	0.75	+5.3
6,461,890	-		PFLU_RS29060	0.75	+2.2
6,461,890	-		PFLU_RS29060	0.75	+2.3
6,461,890	-		PFLU_RS29060	0.75	+1.9
6,461,890	-		PFLU_RS29060	0.75	+0.8
6,461,890	-		PFLU_RS29060	0.75	+0.3
6,461,890	-		PFLU_RS29060	0.75	+0.8
6,461,890	-		PFLU_RS29060	0.75	-1.1
6,461,957	+		PFLU_RS29060	0.86	-0.2
6,461,957	+		PFLU_RS29060	0.86	-2.2
6,461,979	-		PFLU_RS29060	0.89	-1.3
6,461,979	-		PFLU_RS29060	0.89	-1.0
6,461,993	+				+1.3
6,461,994	-				+0.6
6,462,017	+				-0.7
6,462,017	+				-1.0
6,462,047	+				+1.7
6,462,047	+				-0.2
6,462,048	-				+2.0
6,462,065	+				-0.3
6,462,065	+				+1.6
6,462,065	+				-0.5
6,462,065	+				-0.0
6,462,065	+				-0.9
6,462,065	+				-1.7
6,462,065	+				-1.9
6,462,065	+				+0.2
6,462,065	+				-2.1
6,462,065	+				-1.3
6,462,065	+				-0.8
6,462,066	-				+1.1
6,462,066	-				-1.7
6,462,066	-				-1.1
6,462,066	-				-1.9
6,462,066	-				+1.4
6,462,066	-				-1.5
6,462,066	-				-1.8
6,462,066	-				-1.7
6,462,066	-				-0.5
6,462,066	-				-2.7
6,462,066	-				-2.3
6,462,069	+				-0.9
6,462,069	+				+3.0
6,462,069	+				+0.3
6,462,069	+				+2.4
6,462,069	+				+1.8
6,462,069	+				-1.8
6,462,069	+				-0.7
6,462,069	+				+1.9
6,462,069	+				-1.8
6,462,069	+				+3.0
6,462,069	+				+0.5
6,462,069	+				+1.4
6,462,069	+				+0.7
6,462,069	+				+0.8
6,462,069	+				-0.7
6,462,069	+				-1.3
6,462,069	+				+2.5
6,462,069	+				-0.3
6,462,069	+				-2.2
6,462,070	-				-1.6
6,462,070	-				-1.3
6,462,070	-				-0.3
6,462,070	-				-0.7
6,462,070	-				-0.3
6,462,070	-				+0.3
6,462,070	-				-1.9
6,462,070	-				+2.1
6,462,070	-				+2.3
6,462,070	-				+2.0
6,462,073	-				+1.7
6,462,073	-				+2.5
6,462,088	+				+0.2
6,462,088	+				+1.4
6,462,088	+				-1.3
6,462,088	+				+0.6
6,462,088	+				+0.7
6,462,088	+				-1.9
6,462,088	+				-0.1
6,462,088	+				+0.3
6,462,088	+				+0.1
6,462,089	-				-0.8
6,462,089	-				-1.4
6,462,089	-				+1.8
6,462,089	-				+2.1
6,462,089	-				+0.9
6,462,089	-				+0.2
6,462,089	-				+1.9
6,462,089	-				-1.9
6,462,089	-				-2.0
6,462,089	-				-2.9
6,462,089	-				-2.5
6,462,231	+		PFLU_RS29065	0.27	-2.6
6,462,755	+				-0.1
6,462,755	+				+1.5
6,462,765	+				+1.8
6,462,765	+				-0.1
6,462,765	+				+2.4
6,462,765	+				-0.1
6,462,766	-				+0.1
6,462,766	-				-0.5
6,462,766	-				-1.3
6,462,766	-				-0.4
6,462,766	-				+0.5
6,462,766	-				-0.5
6,462,766	-				-0.2
6,462,766	-				-0.7
6,462,856	+		PFLU_RS29070	0.20	+1.5
6,462,857	-		PFLU_RS29070	0.21	-1.4
6,462,857	-		PFLU_RS29070	0.21	-0.0
6,462,857	-		PFLU_RS29070	0.21	-1.6
6,462,925	+		PFLU_RS29070	0.34	+3.9
6,462,926	-		PFLU_RS29070	0.34	-0.6
6,462,926	-		PFLU_RS29070	0.34	+0.9
6,463,113	+		PFLU_RS29070	0.72	+4.3
6,463,113	+		PFLU_RS29070	0.72	-1.6
6,463,113	+		PFLU_RS29070	0.72	+1.5
6,463,113	+		PFLU_RS29070	0.72	-1.0
6,463,113	+		PFLU_RS29070	0.72	+1.9
6,463,113	+		PFLU_RS29070	0.72	+2.3
6,463,113	+		PFLU_RS29070	0.72	-0.8
6,463,113	+		PFLU_RS29070	0.72	+1.8
6,463,114	-		PFLU_RS29070	0.72	-0.6
6,463,114	-		PFLU_RS29070	0.72	+2.7
6,463,114	-		PFLU_RS29070	0.72	-0.8
6,463,114	-		PFLU_RS29070	0.72	+1.8
6,463,114	-		PFLU_RS29070	0.72	-0.3
6,463,114	-		PFLU_RS29070	0.72	+1.5
6,463,114	-		PFLU_RS29070	0.72	+1.4
6,463,114	-		PFLU_RS29070	0.72	-2.3
6,463,307	+				-0.9
6,463,307	+				+1.1
6,463,307	+				+0.5
6,463,308	-				-0.2
6,463,327	-				+1.6
6,463,463	+				+0.7
6,463,576	+		PFLU_RS29075	0.12	-2.3
6,463,576	+		PFLU_RS29075	0.12	-1.9
6,463,576	+		PFLU_RS29075	0.12	+1.5
6,463,576	+		PFLU_RS29075	0.12	-1.7
6,463,577	-		PFLU_RS29075	0.12	+0.9
6,463,577	-		PFLU_RS29075	0.12	+0.3
6,463,577	-		PFLU_RS29075	0.12	-1.3
6,463,577	-		PFLU_RS29075	0.12	-1.8
6,463,677	+		PFLU_RS29075	0.16	-0.1
6,463,677	+		PFLU_RS29075	0.16	+1.7
6,463,677	+		PFLU_RS29075	0.16	+1.2
6,463,677	+		PFLU_RS29075	0.16	-1.1
6,463,677	+		PFLU_RS29075	0.16	-1.8
6,463,677	+		PFLU_RS29075	0.16	-0.4
6,463,677	+		PFLU_RS29075	0.16	+0.4
6,463,678	-		PFLU_RS29075	0.16	-1.8
6,463,678	-		PFLU_RS29075	0.16	+0.7
6,463,678	-		PFLU_RS29075	0.16	-1.7
6,463,678	-		PFLU_RS29075	0.16	-2.7
6,463,863	+		PFLU_RS29075	0.24	+0.3
6,463,863	+		PFLU_RS29075	0.24	-2.2
6,463,863	+		PFLU_RS29075	0.24	-2.4
6,463,863	+		PFLU_RS29075	0.24	+0.0
6,463,863	+		PFLU_RS29075	0.24	+0.9
6,463,863	+		PFLU_RS29075	0.24	-2.4
6,463,864	-		PFLU_RS29075	0.24	-0.5
6,463,864	-		PFLU_RS29075	0.24	-0.7
6,463,864	-		PFLU_RS29075	0.24	-0.6
6,463,864	-		PFLU_RS29075	0.24	-2.7
6,463,864	-		PFLU_RS29075	0.24	+2.6
6,463,864	-		PFLU_RS29075	0.24	+1.0
6,463,864	-		PFLU_RS29075	0.24	-1.5
6,463,911	+		PFLU_RS29075	0.26	+2.3
6,463,911	+		PFLU_RS29075	0.26	-2.0
6,463,911	+		PFLU_RS29075	0.26	+2.8
6,463,911	+		PFLU_RS29075	0.26	+0.9
6,463,911	+		PFLU_RS29075	0.26	+1.0
6,463,911	+		PFLU_RS29075	0.26	-1.9
6,463,911	+		PFLU_RS29075	0.26	-0.6
6,463,911	+		PFLU_RS29075	0.26	+0.8
6,463,911	+		PFLU_RS29075	0.26	+0.5
6,463,912	-		PFLU_RS29075	0.26	-2.2
6,463,912	-		PFLU_RS29075	0.26	+1.5
6,463,912	-		PFLU_RS29075	0.26	+0.5
6,463,912	-		PFLU_RS29075	0.26	-0.1
6,463,986	+		PFLU_RS29075	0.29	-1.1
6,463,986	+		PFLU_RS29075	0.29	-1.4
6,463,986	+		PFLU_RS29075	0.29	+0.3
6,463,986	+		PFLU_RS29075	0.29	-0.3
6,463,986	+		PFLU_RS29075	0.29	+1.5
6,463,986	+		PFLU_RS29075	0.29	+1.3
6,463,986	+		PFLU_RS29075	0.29	+0.0
6,463,986	+		PFLU_RS29075	0.29	+0.4
6,463,986	+		PFLU_RS29075	0.29	-0.5
6,463,986	+		PFLU_RS29075	0.29	-1.5
6,463,986	+		PFLU_RS29075	0.29	+0.9
6,463,986	+		PFLU_RS29075	0.29	+4.2
6,463,986	+		PFLU_RS29075	0.29	-0.7
6,463,987	-		PFLU_RS29075	0.29	-0.7
6,463,987	-		PFLU_RS29075	0.29	+0.9
6,463,987	-		PFLU_RS29075	0.29	-0.3
6,463,987	-		PFLU_RS29075	0.29	-3.0
6,463,987	-		PFLU_RS29075	0.29	-2.6
6,463,995	+		PFLU_RS29075	0.29	-1.2
6,463,995	+		PFLU_RS29075	0.29	-1.2
6,463,995	+		PFLU_RS29075	0.29	-2.3
6,463,995	+		PFLU_RS29075	0.29	-1.0
6,463,995	+		PFLU_RS29075	0.29	-1.2
6,463,995	+		PFLU_RS29075	0.29	-1.8
6,463,995	+		PFLU_RS29075	0.29	+0.2
6,463,995	+		PFLU_RS29075	0.29	+1.7
6,463,995	+		PFLU_RS29075	0.29	+0.9
6,463,996	-		PFLU_RS29075	0.29	+0.0
6,463,996	-		PFLU_RS29075	0.29	-2.2
6,464,058	+		PFLU_RS29075	0.32	-0.7
6,464,058	+		PFLU_RS29075	0.32	+1.9
6,464,058	+		PFLU_RS29075	0.32	+1.3
6,464,058	+		PFLU_RS29075	0.32	+0.5
6,464,058	+		PFLU_RS29075	0.32	+3.5
6,464,058	+		PFLU_RS29075	0.32	+0.3
6,464,059	-		PFLU_RS29075	0.32	+0.0
6,464,059	-		PFLU_RS29075	0.32	-0.6
6,464,059	-		PFLU_RS29075	0.32	+1.1
6,464,059	-		PFLU_RS29075	0.32	-0.7
6,464,059	-		PFLU_RS29075	0.32	-0.5
6,464,059	-		PFLU_RS29075	0.32	+2.2
6,464,059	-		PFLU_RS29075	0.32	-1.2
6,464,059	-		PFLU_RS29075	0.32	+0.0
6,464,059	-		PFLU_RS29075	0.32	-0.5
6,464,186	+		PFLU_RS29075	0.37	-1.3
6,464,186	+		PFLU_RS29075	0.37	-0.9
6,464,186	+		PFLU_RS29075	0.37	+1.3
6,464,187	-		PFLU_RS29075	0.37	+0.5
6,464,187	-		PFLU_RS29075	0.37	+0.6
6,464,187	-		PFLU_RS29075	0.37	+0.3
6,464,187	-		PFLU_RS29075	0.37	+1.4
6,464,187	-		PFLU_RS29075	0.37	-1.3
6,464,187	-		PFLU_RS29075	0.37	+0.0
6,464,187	-		PFLU_RS29075	0.37	+2.7
6,464,187	-		PFLU_RS29075	0.37	+1.3
6,464,187	-		PFLU_RS29075	0.37	-0.7
6,464,210	+		PFLU_RS29075	0.38	+2.6
6,464,210	+		PFLU_RS29075	0.38	+2.0
6,464,210	+		PFLU_RS29075	0.38	+2.4