Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26045

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
5,815,318	+		PFLU_RS26040	0.24	+2.6
5,815,318	+		PFLU_RS26040	0.24	-0.5
5,815,318	+		PFLU_RS26040	0.24	-1.2
5,815,318	+		PFLU_RS26040	0.24	+2.5
5,815,318	+		PFLU_RS26040	0.24	+2.5
5,815,318	+		PFLU_RS26040	0.24	+0.4
5,815,318	+		PFLU_RS26040	0.24	+1.7
5,815,318	+		PFLU_RS26040	0.24	+0.9
5,815,318	+		PFLU_RS26040	0.24	+2.6
5,815,318	+		PFLU_RS26040	0.24	+1.0
5,815,318	+		PFLU_RS26040	0.24	+1.6
5,815,318	+		PFLU_RS26040	0.24	-1.2
5,815,318	+		PFLU_RS26040	0.24	+1.9
5,815,318	+		PFLU_RS26040	0.24	+0.1
5,815,318	+		PFLU_RS26040	0.24	+1.4
5,815,318	+		PFLU_RS26040	0.24	+3.4
5,815,318	+		PFLU_RS26040	0.24	+3.1
5,815,318	+		PFLU_RS26040	0.24	+2.0
5,815,318	+		PFLU_RS26040	0.24	-1.7
5,815,318	+		PFLU_RS26040	0.24	+1.4
5,815,319	-		PFLU_RS26040	0.24	+2.4
5,815,319	-		PFLU_RS26040	0.24	-0.1
5,815,319	-		PFLU_RS26040	0.24	+1.2
5,815,319	-		PFLU_RS26040	0.24	-1.9
5,815,319	-		PFLU_RS26040	0.24	+0.8
5,815,319	-		PFLU_RS26040	0.24	+0.9
5,815,319	-		PFLU_RS26040	0.24	-1.0
5,815,319	-		PFLU_RS26040	0.24	-0.1
5,815,319	-		PFLU_RS26040	0.24	-0.4
5,815,319	-		PFLU_RS26040	0.24	-3.0
5,815,319	-		PFLU_RS26040	0.24	+0.0
5,815,319	-		PFLU_RS26040	0.24	+0.2
5,815,319	-		PFLU_RS26040	0.24	+0.1
5,815,319	-		PFLU_RS26040	0.24	+3.2
5,815,319	-		PFLU_RS26040	0.24	-2.9
5,815,319	-		PFLU_RS26040	0.24	+1.1
5,815,319	-		PFLU_RS26040	0.24	-0.7
5,815,319	-		PFLU_RS26040	0.24	+1.3
5,815,319	-		PFLU_RS26040	0.24	-2.0
5,815,319	-		PFLU_RS26040	0.24	-1.3
5,815,319	-		PFLU_RS26040	0.24	+2.1
5,815,319	-		PFLU_RS26040	0.24	-1.4
5,815,319	-		PFLU_RS26040	0.24	-2.7
5,815,319	-		PFLU_RS26040	0.24	-0.4
5,815,319	-		PFLU_RS26040	0.24	-2.4
5,815,321	+		PFLU_RS26040	0.24	+1.6
5,815,321	+		PFLU_RS26040	0.24	+2.8
5,815,321	+		PFLU_RS26040	0.24	+1.0
5,815,321	+		PFLU_RS26040	0.24	+2.6
5,815,321	+		PFLU_RS26040	0.24	-0.2
5,815,321	+		PFLU_RS26040	0.24	+0.1
5,815,321	+		PFLU_RS26040	0.24	-0.8
5,815,322	-		PFLU_RS26040	0.24	-2.4
5,815,322	-		PFLU_RS26040	0.24	-0.6
5,815,322	-		PFLU_RS26040	0.24	-1.2
5,815,322	-		PFLU_RS26040	0.24	+1.0
5,815,322	-		PFLU_RS26040	0.24	+3.2
5,815,322	-		PFLU_RS26040	0.24	+0.3
5,815,339	+		PFLU_RS26040	0.26	-1.7
5,815,339	+		PFLU_RS26040	0.26	-0.4
5,815,339	+		PFLU_RS26040	0.26	+0.3
5,815,339	+		PFLU_RS26040	0.26	+1.3
5,815,339	+		PFLU_RS26040	0.26	-0.6
5,815,340	-		PFLU_RS26040	0.26	+3.0
5,815,340	-		PFLU_RS26040	0.26	+1.4
5,815,373	+		PFLU_RS26040	0.29	+2.6
5,815,373	+		PFLU_RS26040	0.29	+1.0
5,815,374	-		PFLU_RS26040	0.29	-0.1
5,815,374	-		PFLU_RS26040	0.29	+1.5
5,815,477	+		PFLU_RS26040	0.39	+0.4
5,815,477	+		PFLU_RS26040	0.39	-1.4
5,815,478	-		PFLU_RS26040	0.39	-0.0
5,815,478	-		PFLU_RS26040	0.39	+1.0
5,815,503	+		PFLU_RS26040	0.42	+1.9
5,815,504	-		PFLU_RS26040	0.42	-0.1
5,815,504	-		PFLU_RS26040	0.42	-2.0
5,815,521	+		PFLU_RS26040	0.44	-1.4
5,815,521	+		PFLU_RS26040	0.44	+0.6
5,815,521	+		PFLU_RS26040	0.44	+1.0
5,815,522	-		PFLU_RS26040	0.44	-0.3
5,815,522	-		PFLU_RS26040	0.44	+0.8
5,815,522	-		PFLU_RS26040	0.44	+0.8
5,815,522	-		PFLU_RS26040	0.44	+2.5
5,815,522	-		PFLU_RS26040	0.44	+1.4
5,815,522	-		PFLU_RS26040	0.44	+1.7
5,815,522	-		PFLU_RS26040	0.44	+1.9
5,815,522	-		PFLU_RS26040	0.44	+1.2
5,815,522	-		PFLU_RS26040	0.44	+1.5
5,815,522	-		PFLU_RS26040	0.44	+1.9
5,815,524	+		PFLU_RS26040	0.44	+0.1
5,815,525	-		PFLU_RS26040	0.44	+3.1
5,815,532	+		PFLU_RS26040	0.45	-0.6
5,815,573	-		PFLU_RS26040	0.49	+1.1
5,815,606	+		PFLU_RS26040	0.52	-0.5
5,815,637	-		PFLU_RS26040	0.55	-2.1
5,815,637	-		PFLU_RS26040	0.55	-0.7
5,815,637	-		PFLU_RS26040	0.55	-3.0
5,815,637	-		PFLU_RS26040	0.55	+0.3
5,815,672	+		PFLU_RS26040	0.58	+0.3
5,815,672	+		PFLU_RS26040	0.58	+2.1
5,815,672	+		PFLU_RS26040	0.58	+1.6
5,815,672	+		PFLU_RS26040	0.58	+0.3
5,815,673	-		PFLU_RS26040	0.58	-2.6
5,815,673	-		PFLU_RS26040	0.58	+0.3
5,815,684	+		PFLU_RS26040	0.60	-1.2
5,815,684	+		PFLU_RS26040	0.60	+0.8
5,815,684	+		PFLU_RS26040	0.60	-0.4
5,815,684	+		PFLU_RS26040	0.60	+1.6
5,815,684	+		PFLU_RS26040	0.60	-1.4
5,815,696	+		PFLU_RS26040	0.61	+2.1
5,815,697	-		PFLU_RS26040	0.61	-0.1
5,815,697	-		PFLU_RS26040	0.61	-0.4
5,815,697	-		PFLU_RS26040	0.61	-1.6
5,815,702	+		PFLU_RS26040	0.61	+2.6
5,815,702	+		PFLU_RS26040	0.61	-1.0
5,815,702	+		PFLU_RS26040	0.61	+2.6
5,815,702	+		PFLU_RS26040	0.61	-2.1
5,815,703	-		PFLU_RS26040	0.61	+0.2
5,815,703	-		PFLU_RS26040	0.61	-0.6
5,815,745	+		PFLU_RS26040	0.65	+0.3
5,815,745	+		PFLU_RS26040	0.65	+2.3
5,815,745	+		PFLU_RS26040	0.65	-2.1
5,815,745	+		PFLU_RS26040	0.65	-1.2
5,815,746	-		PFLU_RS26040	0.66	+3.4
5,815,766	+		PFLU_RS26040	0.68	+0.0
5,815,766	+		PFLU_RS26040	0.68	-2.1
5,815,767	-		PFLU_RS26040	0.68	-0.1
5,815,824	+		PFLU_RS26040	0.73	+0.9
5,815,824	+		PFLU_RS26040	0.73	-1.7
5,815,825	-		PFLU_RS26040	0.73	+1.0
5,815,825	-		PFLU_RS26040	0.73	+0.0
5,815,844	-		PFLU_RS26040	0.75	-1.4
5,815,850	+		PFLU_RS26040	0.76	-1.2
5,815,850	+		PFLU_RS26040	0.76	+1.3
5,815,850	+		PFLU_RS26040	0.76	-0.5
5,815,851	-		PFLU_RS26040	0.76	-2.3
5,815,851	-		PFLU_RS26040	0.76	-2.3
5,815,888	+		PFLU_RS26040	0.79	+0.4
5,815,889	-		PFLU_RS26040	0.80	+0.6
5,815,889	-		PFLU_RS26040	0.80	-1.9
5,815,954	+		PFLU_RS26040	0.86	+1.2
5,815,954	+		PFLU_RS26040	0.86	+0.0
5,815,954	+		PFLU_RS26040	0.86	+1.4
5,815,954	+		PFLU_RS26040	0.86	+0.8
5,815,954	+		PFLU_RS26040	0.86	+2.9
5,815,954	+		PFLU_RS26040	0.86	+1.1
5,815,954	+		PFLU_RS26040	0.86	+0.7
5,815,954	+		PFLU_RS26040	0.86	+0.3
5,815,954	+		PFLU_RS26040	0.86	-1.0
5,815,954	+		PFLU_RS26040	0.86	-1.8
5,815,954	+		PFLU_RS26040	0.86	+0.3
5,815,955	-		PFLU_RS26040	0.86	+2.7
5,815,955	-		PFLU_RS26040	0.86	+0.9
5,815,955	-		PFLU_RS26040	0.86	+0.1
5,815,955	-		PFLU_RS26040	0.86	+1.4
5,816,061	+				-1.6
5,816,061	+				+2.2
5,816,062	-				-1.2
5,816,062	-				-0.3
5,816,062	-				+1.9
5,816,062	-				-2.1
5,816,062	-				+0.7
5,816,062	-				+0.4
5,816,062	-				+3.5
5,816,062	-				-2.3
5,816,062	-				-0.6
5,816,089	-				-0.6
5,816,097	+				-0.4
5,816,098	-				-2.4
5,816,132	+				-0.1
5,816,132	+				-1.6
5,816,132	+				-1.2
5,816,132	+				+0.8
5,816,133	-				-1.5
5,816,133	-				-0.7
5,816,135	+				+0.3
5,816,135	+				-2.1
5,816,136	-				+0.0
5,816,136	-				+0.3
5,816,140	+				-2.3
5,816,140	+				+1.8
5,816,140	+				+2.7
5,816,140	+				-0.4
5,816,140	+				+0.8
5,816,140	+				-1.3
5,816,140	+				-1.5
5,816,140	+				-1.8
5,816,140	+				-1.8
5,816,140	+				+0.3
5,816,140	+				-1.9
5,816,140	+				-1.9
5,816,141	-				+2.4
5,816,141	-				+1.0
5,816,141	-				+0.4
5,816,141	-				-1.3
5,816,141	-				+0.6
5,816,141	-				+4.2
5,816,141	-				-0.0
5,816,141	-				+0.7
5,816,141	-				+4.3
5,816,141	-				+1.4
5,816,141	-				-0.6
5,816,141	-				+1.2
5,816,141	-				+1.4
5,816,141	-				+2.8
5,816,141	-				+2.0
5,816,141	-				+5.6
5,816,169	+				-1.3
5,816,219	+				-0.3
5,816,219	+				-1.5
5,816,219	+				+1.6
5,816,219	+				-2.2
5,816,219	+				+3.5
5,816,219	+				+2.8
5,816,219	+				-1.6
5,816,219	+				-0.3
5,816,219	+				-1.6
5,816,219	+				+1.0
5,816,219	+				+1.1
5,816,219	+				-1.5
5,816,219	+				-1.0
5,816,219	+				-0.8
5,816,219	+				-0.5
5,816,219	+				+1.4
5,816,219	+				+0.4
5,816,219	+				-1.6
5,816,220	-				+3.1
5,816,220	-				-0.6
5,816,220	-				-0.6
5,816,220	-				-0.6
5,816,220	-				+0.6
5,816,220	-				+0.7
5,816,220	-				-0.6
5,816,220	-				+1.1
5,816,220	-				-1.3
5,816,220	-				-2.2
5,816,220	-				+1.2
5,816,220	-				-3.0
5,816,220	-				-1.2
5,816,220	-				-2.6
5,816,220	-				-0.8
5,816,220	-				-1.1
5,816,220	-				-0.5
5,816,220	-				+0.7
5,816,220	-				-1.2
5,816,220	-				-0.0
5,816,220	-				-1.2
5,816,220	-				+1.0
5,816,299	+				-0.4
5,816,300	-				+1.5
5,816,300	-				-0.4
5,816,300	-				+2.1
5,816,300	-				-0.1
5,816,300	-				+1.2
5,816,445	-				-1.6
5,816,445	-				+1.4
5,816,524	+		PFLU_RS26045	0.13	-2.0
5,816,525	-		PFLU_RS26045	0.13	-0.5
5,816,525	-		PFLU_RS26045	0.13	+2.2
5,816,531	+		PFLU_RS26045	0.13	+4.1
5,816,532	-		PFLU_RS26045	0.14	-0.1
5,816,532	-		PFLU_RS26045	0.14	+0.6
5,816,532	-		PFLU_RS26045	0.14	+3.0
5,816,532	-		PFLU_RS26045	0.14	-0.6
5,816,592	+		PFLU_RS26045	0.17	-1.7
5,816,592	+		PFLU_RS26045	0.17	-1.6
5,816,592	+		PFLU_RS26045	0.17	+1.8
5,816,592	+		PFLU_RS26045	0.17	-1.0
5,816,592	+		PFLU_RS26045	0.17	+2.6
5,816,593	-		PFLU_RS26045	0.17	+0.7
5,816,593	-		PFLU_RS26045	0.17	+2.6
5,816,593	-		PFLU_RS26045	0.17	-0.3
5,816,655	+		PFLU_RS26045	0.21	+3.1
5,816,655	+		PFLU_RS26045	0.21	-0.6
5,816,655	+		PFLU_RS26045	0.21	-2.0
5,816,656	-		PFLU_RS26045	0.21	+1.2
5,816,656	-		PFLU_RS26045	0.21	-0.8
5,816,673	+		PFLU_RS26045	0.22	+1.8
5,816,674	-		PFLU_RS26045	0.22	-1.6
5,816,674	-		PFLU_RS26045	0.22	-0.3
5,816,693	+		PFLU_RS26045	0.23	-1.8
5,816,693	+		PFLU_RS26045	0.23	-1.4
5,816,693	+		PFLU_RS26045	0.23	+0.2
5,816,694	-		PFLU_RS26045	0.23	-0.8
5,816,694	-		PFLU_RS26045	0.23	+0.8
5,816,694	-		PFLU_RS26045	0.23	-0.3
5,816,828	+		PFLU_RS26045	0.31	+0.0
5,816,859	+		PFLU_RS26045	0.33	+1.9
5,816,859	+		PFLU_RS26045	0.33	+1.6
5,816,859	+		PFLU_RS26045	0.33	+5.1
5,816,860	-		PFLU_RS26045	0.33	-0.4
5,816,860	-		PFLU_RS26045	0.33	-0.8
5,816,889	+		PFLU_RS26045	0.35	+0.3
5,816,889	+		PFLU_RS26045	0.35	+2.2
5,816,908	-		PFLU_RS26045	0.36	-0.9
5,816,908	-		PFLU_RS26045	0.36	+0.3
5,816,908	-		PFLU_RS26045	0.36	+0.8
5,816,908	-		PFLU_RS26045	0.36	-0.7
5,816,908	-		PFLU_RS26045	0.36	+0.4
5,816,987	+		PFLU_RS26045	0.41	-1.4
5,816,988	-		PFLU_RS26045	0.41	+0.8
5,816,988	-		PFLU_RS26045	0.41	-1.3
5,816,988	-		PFLU_RS26045	0.41	+1.2
5,816,988	-		PFLU_RS26045	0.41	-1.0
5,817,030	+		PFLU_RS26045	0.44	+0.6
5,817,030	+		PFLU_RS26045	0.44	-2.3
5,817,030	+		PFLU_RS26045	0.44	-2.6
5,817,030	+		PFLU_RS26045	0.44	+1.5
5,817,030	+		PFLU_RS26045	0.44	-1.6
5,817,030	+		PFLU_RS26045	0.44	-2.0
5,817,031	-		PFLU_RS26045	0.44	+0.0
5,817,031	-		PFLU_RS26045	0.44	+2.4
5,817,031	-		PFLU_RS26045	0.44	+1.0
5,817,031	-		PFLU_RS26045	0.44	+5.0
5,817,031	-		PFLU_RS26045	0.44	-0.6
5,817,031	-		PFLU_RS26045	0.44	-2.3
5,817,031	-		PFLU_RS26045	0.44	+2.8
5,817,031	-		PFLU_RS26045	0.44	-1.3
5,817,031	-		PFLU_RS26045	0.44	+0.3
5,817,091	+		PFLU_RS26045	0.47	-1.1
5,817,091	+		PFLU_RS26045	0.47	+0.5
5,817,092	-		PFLU_RS26045	0.47	-1.2
5,817,210	+		PFLU_RS26045	0.54	-1.1
5,817,210	+		PFLU_RS26045	0.54	+1.8
5,817,210	+		PFLU_RS26045	0.54	-0.6
5,817,211	-		PFLU_RS26045	0.54	+1.3
5,817,211	-		PFLU_RS26045	0.54	-0.2
5,817,211	-		PFLU_RS26045	0.54	+0.0
5,817,211	-		PFLU_RS26045	0.54	-0.6
5,817,211	-		PFLU_RS26045	0.54	-0.8
5,817,266	-		PFLU_RS26045	0.58	+0.2
5,817,317	+		PFLU_RS26045	0.61	-1.2
5,817,317	+		PFLU_RS26045	0.61	-0.6
5,817,317	+		PFLU_RS26045	0.61	+0.2
5,817,361	+		PFLU_RS26045	0.63	+2.4
5,817,361	+		PFLU_RS26045	0.63	+1.4
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