Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14615

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
3,265,257	+		PFLU_RS14610	0.16	-0.8
3,265,257	+		PFLU_RS14610	0.16	+2.2
3,265,258	-		PFLU_RS14610	0.16	+2.3
3,265,258	-		PFLU_RS14610	0.16	-0.8
3,265,285	+		PFLU_RS14610	0.19	+0.5
3,265,285	+		PFLU_RS14610	0.19	+0.8
3,265,286	-		PFLU_RS14610	0.19	+0.8
3,265,286	-		PFLU_RS14610	0.19	-0.8
3,265,286	-		PFLU_RS14610	0.19	-0.5
3,265,286	-		PFLU_RS14610	0.19	+0.8
3,265,286	-		PFLU_RS14610	0.19	+1.1
3,265,354	+		PFLU_RS14610	0.25	+0.2
3,265,354	+		PFLU_RS14610	0.25	+2.8
3,265,354	+		PFLU_RS14610	0.25	+1.1
3,265,354	+		PFLU_RS14610	0.25	-0.2
3,265,354	+		PFLU_RS14610	0.25	+1.3
3,265,355	-		PFLU_RS14610	0.25	+1.0
3,265,355	-		PFLU_RS14610	0.25	-2.1
3,265,355	-		PFLU_RS14610	0.25	-0.6
3,265,355	-		PFLU_RS14610	0.25	+1.3
3,265,456	+		PFLU_RS14610	0.35	-0.2
3,265,456	+		PFLU_RS14610	0.35	+0.8
3,265,456	+		PFLU_RS14610	0.35	+1.3
3,265,456	+		PFLU_RS14610	0.35	+4.8
3,265,457	-		PFLU_RS14610	0.35	+1.8
3,265,493	-		PFLU_RS14610	0.38	+0.5
3,265,493	-		PFLU_RS14610	0.38	-2.2
3,265,493	-		PFLU_RS14610	0.38	-1.8
3,265,493	-		PFLU_RS14610	0.38	-0.8
3,265,493	-		PFLU_RS14610	0.38	-1.1
3,265,493	-		PFLU_RS14610	0.38	-1.8
3,265,493	-		PFLU_RS14610	0.38	-0.6
3,265,511	-		PFLU_RS14610	0.40	-0.2
3,265,600	+		PFLU_RS14610	0.48	-0.8
3,265,600	+		PFLU_RS14610	0.48	-0.8
3,265,601	-		PFLU_RS14610	0.48	+2.9
3,265,601	-		PFLU_RS14610	0.48	-0.2
3,265,615	+		PFLU_RS14610	0.50	-1.6
3,265,615	+		PFLU_RS14610	0.50	+0.2
3,265,615	+		PFLU_RS14610	0.50	-1.4
3,265,615	+		PFLU_RS14610	0.50	-0.6
3,265,615	+		PFLU_RS14610	0.50	-0.1
3,265,616	-		PFLU_RS14610	0.50	-2.8
3,265,648	+		PFLU_RS14610	0.53	+1.2
3,265,649	-		PFLU_RS14610	0.53	-3.7
3,265,649	-		PFLU_RS14610	0.53	+2.3
3,265,649	-		PFLU_RS14610	0.53	-2.6
3,265,669	+		PFLU_RS14610	0.55	+2.9
3,265,669	+		PFLU_RS14610	0.55	-1.6
3,265,669	+		PFLU_RS14610	0.55	-0.1
3,265,670	-		PFLU_RS14610	0.55	+1.4
3,265,670	-		PFLU_RS14610	0.55	-2.6
3,265,670	-		PFLU_RS14610	0.55	+0.9
3,265,670	-		PFLU_RS14610	0.55	+5.3
3,265,795	-		PFLU_RS14610	0.66	-0.6
3,265,795	-		PFLU_RS14610	0.66	+0.8
3,265,891	+		PFLU_RS14610	0.75	+2.9
3,265,891	+		PFLU_RS14610	0.75	+1.8
3,265,891	+		PFLU_RS14610	0.75	-1.8
3,265,892	-		PFLU_RS14610	0.75	+0.4
3,265,894	+		PFLU_RS14610	0.75	+0.8
3,265,894	+		PFLU_RS14610	0.75	-1.6
3,265,894	+		PFLU_RS14610	0.75	+2.1
3,265,895	-		PFLU_RS14610	0.76	-2.1
3,265,895	-		PFLU_RS14610	0.76	-0.8
3,265,895	-		PFLU_RS14610	0.76	+3.7
3,265,895	-		PFLU_RS14610	0.76	-1.6
3,266,141	+				+1.1
3,266,141	+				-2.5
3,266,142	-				+1.8
3,266,155	+				-1.4
3,266,166	-				+1.9
3,266,204	+				-0.8
3,266,225	+				+1.8
3,266,225	+				+0.3
3,266,293	+				-1.1
3,266,293	+				+1.5
3,266,293	+				-0.6
3,266,293	+				+0.2
3,266,293	+				-0.2
3,266,293	+				-1.8
3,266,293	+				-2.6
3,266,293	+				+4.1
3,266,293	+				-0.4
3,266,293	+				+2.0
3,266,293	+				-0.6
3,266,293	+				+1.5
3,266,293	+				-0.6
3,266,293	+				+2.4
3,266,293	+				-1.1
3,266,293	+				-2.2
3,266,294	-				+2.2
3,266,294	-				+0.8
3,266,294	-				+2.2
3,266,294	-				+0.3
3,266,294	-				+3.3
3,266,294	-				+1.8
3,266,294	-				+0.0
3,266,294	-				-2.3
3,266,368	+		PFLU_RS14615	0.17	-1.7
3,266,368	+		PFLU_RS14615	0.17	-1.1
3,266,368	+		PFLU_RS14615	0.17	+1.5
3,266,368	+		PFLU_RS14615	0.17	+0.8
3,266,368	+		PFLU_RS14615	0.17	-1.2
3,266,368	+		PFLU_RS14615	0.17	-1.2
3,266,368	+		PFLU_RS14615	0.17	+1.2
3,266,369	-		PFLU_RS14615	0.17	+0.8
3,266,369	-		PFLU_RS14615	0.17	+2.4
3,266,369	-		PFLU_RS14615	0.17	+2.3
3,266,369	-		PFLU_RS14615	0.17	+0.9
3,266,369	-		PFLU_RS14615	0.17	-0.6
3,266,417	+		PFLU_RS14615	0.23	-0.2
3,266,417	+		PFLU_RS14615	0.23	+2.2
3,266,417	+		PFLU_RS14615	0.23	-1.2
3,266,417	+		PFLU_RS14615	0.23	+1.8
3,266,417	+		PFLU_RS14615	0.23	+0.2
3,266,417	+		PFLU_RS14615	0.23	+0.5
3,266,417	+		PFLU_RS14615	0.23	+0.2
3,266,417	+		PFLU_RS14615	0.23	-1.4
3,266,417	+		PFLU_RS14615	0.23	+0.2
3,266,418	-		PFLU_RS14615	0.23	-0.8
3,266,418	-		PFLU_RS14615	0.23	+0.4
3,266,418	-		PFLU_RS14615	0.23	+0.4
3,266,418	-		PFLU_RS14615	0.23	+2.4
3,266,418	-		PFLU_RS14615	0.23	+3.6
3,266,418	-		PFLU_RS14615	0.23	+3.4
3,266,418	-		PFLU_RS14615	0.23	+0.1
3,266,418	-		PFLU_RS14615	0.23	-1.6
3,266,418	-		PFLU_RS14615	0.23	-2.2
3,266,418	-		PFLU_RS14615	0.23	+0.2
3,266,418	-		PFLU_RS14615	0.23	-1.4
3,266,418	-		PFLU_RS14615	0.23	+2.8
3,266,418	-		PFLU_RS14615	0.23	+0.9
3,266,418	-		PFLU_RS14615	0.23	+0.2
3,266,419	+		PFLU_RS14615	0.23	+0.3
3,266,419	+		PFLU_RS14615	0.23	-2.1
3,266,419	+		PFLU_RS14615	0.23	+3.3
3,266,419	+		PFLU_RS14615	0.23	+2.4
3,266,419	+		PFLU_RS14615	0.23	-0.8
3,266,419	+		PFLU_RS14615	0.23	+3.3
3,266,419	+		PFLU_RS14615	0.23	-0.2
3,266,419	+		PFLU_RS14615	0.23	+1.0
3,266,419	+		PFLU_RS14615	0.23	+0.2
3,266,419	+		PFLU_RS14615	0.23	+1.8
3,266,419	+		PFLU_RS14615	0.23	-1.7
3,266,419	+		PFLU_RS14615	0.23	-1.1
3,266,419	+		PFLU_RS14615	0.23	-0.2
3,266,419	+		PFLU_RS14615	0.23	-0.6
3,266,419	+		PFLU_RS14615	0.23	-1.6
3,266,419	+		PFLU_RS14615	0.23	+1.8
3,266,419	+		PFLU_RS14615	0.23	-1.7
3,266,419	+		PFLU_RS14615	0.23	-1.2
3,266,419	+		PFLU_RS14615	0.23	+0.9
3,266,419	+		PFLU_RS14615	0.23	+1.0
3,266,419	+		PFLU_RS14615	0.23	-1.4
3,266,420	-		PFLU_RS14615	0.23	-0.6
3,266,420	-		PFLU_RS14615	0.23	+1.7
3,266,420	-		PFLU_RS14615	0.23	+3.2
3,266,420	-		PFLU_RS14615	0.23	-0.4
3,266,420	-		PFLU_RS14615	0.23	+0.3
3,266,420	-		PFLU_RS14615	0.23	+1.4
3,266,420	-		PFLU_RS14615	0.23	-0.7
3,266,420	-		PFLU_RS14615	0.23	-1.6
3,266,420	-		PFLU_RS14615	0.23	-2.6
3,266,420	-		PFLU_RS14615	0.23	+2.2
3,266,420	-		PFLU_RS14615	0.23	-1.2
3,266,420	-		PFLU_RS14615	0.23	+2.8
3,266,420	-		PFLU_RS14615	0.23	+1.4
3,266,420	-		PFLU_RS14615	0.23	-2.8
3,266,420	-		PFLU_RS14615	0.23	+1.1
3,266,420	-		PFLU_RS14615	0.23	-2.1
3,266,420	-		PFLU_RS14615	0.23	-1.6
3,266,420	-		PFLU_RS14615	0.23	-1.7
3,266,420	-		PFLU_RS14615	0.23	+2.3
3,266,420	-		PFLU_RS14615	0.23	+2.9
3,266,420	-		PFLU_RS14615	0.23	+1.9
3,266,420	-		PFLU_RS14615	0.23	+1.5
3,266,420	-		PFLU_RS14615	0.23	+1.8
3,266,420	-		PFLU_RS14615	0.23	-1.6
3,266,456	+		PFLU_RS14615	0.27	+0.4
3,266,456	+		PFLU_RS14615	0.27	+0.6
3,266,456	+		PFLU_RS14615	0.27	+0.4
3,266,456	+		PFLU_RS14615	0.27	-2.2
3,266,456	+		PFLU_RS14615	0.27	+2.7
3,266,457	-		PFLU_RS14615	0.27	-2.2
3,266,457	-		PFLU_RS14615	0.27	-2.2
3,266,457	-		PFLU_RS14615	0.27	-2.9
3,266,470	+		PFLU_RS14615	0.29	+1.8
3,266,470	+		PFLU_RS14615	0.29	-2.2
3,266,470	+		PFLU_RS14615	0.29	+3.3
3,266,470	+		PFLU_RS14615	0.29	-0.2
3,266,471	-		PFLU_RS14615	0.29	+0.2
3,266,471	-		PFLU_RS14615	0.29	-1.1
3,266,471	-		PFLU_RS14615	0.29	-3.3
3,266,471	-		PFLU_RS14615	0.29	-1.7
3,266,594	-		PFLU_RS14615	0.43	+1.8
3,266,594	-		PFLU_RS14615	0.43	-0.6
3,266,594	-		PFLU_RS14615	0.43	+1.9
3,266,611	+		PFLU_RS14615	0.45	+1.3
3,266,611	+		PFLU_RS14615	0.45	-1.8
3,266,612	-		PFLU_RS14615	0.45	+1.4
3,266,612	-		PFLU_RS14615	0.45	+4.0
3,266,669	-		PFLU_RS14615	0.51	+3.1
3,266,669	-		PFLU_RS14615	0.51	-2.1
3,266,722	+		PFLU_RS14615	0.57	+3.1
3,266,722	+		PFLU_RS14615	0.57	-1.8
3,266,722	+		PFLU_RS14615	0.57	+0.2
3,266,722	+		PFLU_RS14615	0.57	+1.8
3,266,723	-		PFLU_RS14615	0.57	-1.2
3,266,742	+		PFLU_RS14615	0.60	+1.2
3,266,743	-		PFLU_RS14615	0.60	-0.2
3,266,785	+		PFLU_RS14615	0.64	+1.8
3,266,785	+		PFLU_RS14615	0.64	+0.2
3,266,831	+		PFLU_RS14615	0.70	-1.6
3,266,831	+		PFLU_RS14615	0.70	+4.8
3,266,831	+		PFLU_RS14615	0.70	+1.0
3,266,831	+		PFLU_RS14615	0.70	+2.3
3,266,831	+		PFLU_RS14615	0.70	+2.3
3,266,832	-		PFLU_RS14615	0.70	-0.1
3,266,832	-		PFLU_RS14615	0.70	-0.2
3,266,832	-		PFLU_RS14615	0.70	-1.6
3,266,832	-		PFLU_RS14615	0.70	+4.8
3,266,832	-		PFLU_RS14615	0.70	+1.8
3,266,832	-		PFLU_RS14615	0.70	+2.9
3,266,832	-		PFLU_RS14615	0.70	+0.8
3,266,832	-		PFLU_RS14615	0.70	+0.2
3,266,832	-		PFLU_RS14615	0.70	-1.2
3,267,040	+				-0.2
3,267,041	-				-1.1
3,267,041	-				+0.8
3,267,043	+				-1.2
3,267,043	+				-0.8
3,267,043	+				-1.9
3,267,043	+				+0.0
3,267,043	+				+2.0
3,267,043	+				+2.8
3,267,043	+				-0.6
3,267,044	-				+4.2
3,267,044	-				-0.2
3,267,044	-				-0.8
3,267,044	-				+1.0
3,267,044	-				+1.8
3,267,044	-				-1.8
3,267,044	-				+2.5
3,267,092	+				+0.2
3,267,092	+				-0.2
3,267,093	-				+1.4
3,267,123	+				-1.2
3,267,124	-				+1.8
3,267,154	+				+0.9
3,267,154	+				+0.5
3,267,154	+				-2.2
3,267,154	+				-0.2
3,267,154	+				+2.4
3,267,155	-				-1.4
3,267,155	-				+1.0
3,267,165	+				-1.3
3,267,407	+		PFLU_RS14620	0.13	-0.6
3,267,407	+		PFLU_RS14620	0.13	-0.8
3,267,408	-		PFLU_RS14620	0.14	-0.6
3,267,408	-		PFLU_RS14620	0.14	+2.7
3,267,408	-		PFLU_RS14620	0.14	+0.2
3,267,521	+		PFLU_RS14620	0.25	-0.8
3,267,521	+		PFLU_RS14620	0.25	-2.1
3,267,521	+		PFLU_RS14620	0.25	-1.7
3,267,521	+		PFLU_RS14620	0.25	-1.8
3,267,521	+		PFLU_RS14620	0.25	+1.2
3,267,521	+		PFLU_RS14620	0.25	+1.9
3,267,521	+		PFLU_RS14620	0.25	-1.7
3,267,521	+		PFLU_RS14620	0.25	+1.3
3,267,522	-		PFLU_RS14620	0.25	-1.3
3,267,522	-		PFLU_RS14620	0.25	+2.2
3,267,522	-		PFLU_RS14620	0.25	-1.4
3,267,622	+		PFLU_RS14620	0.35	-2.0
3,267,623	-		PFLU_RS14620	0.35	+1.4
3,267,635	+		PFLU_RS14620	0.36	-0.5
3,267,635	+		PFLU_RS14620	0.36	+1.5
3,267,636	-		PFLU_RS14620	0.36	-2.3
3,267,636	-		PFLU_RS14620	0.36	+0.9
3,267,636	-		PFLU_RS14620	0.36	-0.3
3,267,636	-		PFLU_RS14620	0.36	-0.1
3,267,636	-		PFLU_RS14620	0.36	-1.6
3,267,671	+		PFLU_RS14620	0.40	-1.4
3,267,672	-		PFLU_RS14620	0.40	+0.7
3,267,679	+		PFLU_RS14620	0.40	+0.2
3,267,679	+		PFLU_RS14620	0.40	-1.0
3,267,679	+		PFLU_RS14620	0.40	-1.1
3,267,679	+		PFLU_RS14620	0.40	+0.7
3,267,679	+		PFLU_RS14620	0.40	-1.6
3,267,679	+		PFLU_RS14620	0.40	+0.6
3,267,679	+		PFLU_RS14620	0.40	-2.0
3,267,680	-		PFLU_RS14620	0.40	-0.3
3,267,680	-		PFLU_RS14620	0.40	+1.7
3,267,680	-		PFLU_RS14620	0.40	+0.0
3,267,680	-		PFLU_RS14620	0.40	-1.2
3,267,680	-		PFLU_RS14620	0.40	-2.2
3,267,693	-		PFLU_RS14620	0.42	+4.0
3,267,693	-		PFLU_RS14620	0.42	-2.0
3,267,746	+		PFLU_RS14620	0.47	-1.1
3,267,746	+		PFLU_RS14620	0.47	-0.8
3,267,746	+		PFLU_RS14620	0.47	-0.3
3,267,746	+		PFLU_RS14620	0.47	-1.1
3,267,746	+		PFLU_RS14620	0.47	-1.3
3,267,747	-		PFLU_RS14620	0.47	+1.0
3,267,747	-		PFLU_RS14620	0.47	-2.2
3,267,828	-		PFLU_RS14620	0.55	-0.6
3,267,929	+		PFLU_RS14620	0.65	-1.4
3,267,929	+		PFLU_RS14620	0.65	-1.3
3,267,930	-		PFLU_RS14620	0.65	-1.3
3,267,930	-		PFLU_RS14620	0.65	+0.5
3,267,930	-		PFLU_RS14620	0.65	+0.2
3,267,930	-		PFLU_RS14620	0.65	-1.6
3,267,930	-		PFLU_RS14620	0.65	-1.8
3,267,930	-		PFLU_RS14620	0.65	+0.9
3,267,930	-		PFLU_RS14620	0.65	-0.5
3,267,930	-		PFLU_RS14620	0.65	+0.2
3,267,930	-		PFLU_RS14620	0.65	-0.8
3,267,930	-		PFLU_RS14620	0.65	+1.5
3,267,930	-		PFLU_RS14620	0.65	+0.5
3,267,932	+		PFLU_RS14620	0.65	-1.6
3,267,932	+		PFLU_RS14620	0.65	-0.7
3,267,932	+		PFLU_RS14620	0.65	-0.3
3,267,932	+		PFLU_RS14620	0.65	-0.7
3,267,932	+		PFLU_RS14620	0.65	-1.3
3,267,932	+		PFLU_RS14620	0.65	-3.0
3,267,932	+		PFLU_RS14620	0.65	+1.3
3,267,932	+		PFLU_RS14620	0.65	-0.8
3,267,932	+		PFLU_RS14620	0.65	-0.3
3,267,932	+		PFLU_RS14620	0.65	+0.2
3,267,932	+		PFLU_RS14620	0.65	+1.3
3,267,932	+		PFLU_RS14620	0.65	-0.6
3,267,932	+		PFLU_RS14620	0.65	+2.1
3,267,932	+		PFLU_RS14620	0.65	-1.8
3,267,932	+		PFLU_RS14620	0.65	+1.7
3,267,932	+		PFLU_RS14620	0.65	-0.8
3,267,932	+		PFLU_RS14620	0.65	-0.1
3,267,932	+		PFLU_RS14620	0.65	+1.1
3,267,932	+		PFLU_RS14620	0.65	+1.7
3,267,932	+		PFLU_RS14620	0.65	-1.1
3,267,932	+		PFLU_RS14620	0.65	+2.3
3,267,933	-		PFLU_RS14620	0.65	+1.9
3,267,933	-		PFLU_RS14620	0.65	-1.7
3,267,933	-		PFLU_RS14620	0.65	-0.2
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3,267,933	-		PFLU_RS14620	0.65	-0.6
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3,267,933	-		PFLU_RS14620	0.65	+1.5
3,267,933	-		PFLU_RS14620	0.65	+0.4
3,267,933	-		PFLU_RS14620	0.65	-2.1
3,267,933	-		PFLU_RS14620	0.65	-0.6
3,267,933	-		PFLU_RS14620	0.65	+0.7
3,267,933	-		PFLU_RS14620	0.65	-0.3
3,267,933	-		PFLU_RS14620	0.65	-1.7
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3,267,933	-		PFLU_RS14620	0.65	-0.8
3,267,933	-		PFLU_RS14620	0.65	-1.3
3,267,944	+		PFLU_RS14620	0.67	+1.7
3,267,944	+		PFLU_RS14620	0.67	-0.6
3,267,944	+		PFLU_RS14620	0.67	-1.1
3,267,944	+		PFLU_RS14620	0.67	+0.3
3,267,945	-		PFLU_RS14620	0.67	+1.3
3,267,945	-		PFLU_RS14620	0.67	+1.5
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3,267,990	+		PFLU_RS14620	0.71	-1.4
3,267,990	+		PFLU_RS14620	0.71	+1.4
3,267,990	+		PFLU_RS14620	0.71	-1.6
3,267,991	-		PFLU_RS14620	0.71	+1.4
3,267,991	-		PFLU_RS14620	0.71	+0.7
3,267,991	-		PFLU_RS14620	0.71	-1.3
3,267,991	-		PFLU_RS14620	0.71	+1.7
3,268,012	-		PFLU_RS14620	0.73	-1.8