Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13315

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
3,009,333	+		PFLU_RS13305	0.50	-0.8
3,009,334	-		PFLU_RS13305	0.50	+1.5
3,009,453	+		PFLU_RS13305	0.73	-1.0
3,009,483	+		PFLU_RS13305	0.79	-1.0
3,009,582	-				+1.3
3,009,582	-				-1.0
3,009,635	+				-0.2
3,009,635	+				-0.7
3,009,635	+				+3.8
3,009,635	+				-1.2
3,009,635	+				-0.2
3,009,635	+				-2.0
3,009,636	-				-1.9
3,009,636	-				+0.0
3,009,636	-				-1.4
3,009,636	-				-1.8
3,009,636	-				+2.1
3,009,636	-				-1.4
3,009,636	-				-0.2
3,009,664	+				+3.0
3,009,664	+				+3.8
3,009,664	+				+0.1
3,009,664	+				+3.7
3,009,664	+				-2.0
3,009,664	+				-1.4
3,009,664	+				+1.8
3,009,664	+				-1.7
3,009,664	+				-0.2
3,009,665	-				-1.5
3,009,665	-				-0.8
3,009,665	-				-1.0
3,009,665	-				-1.2
3,009,665	-				-3.2
3,009,665	-				+1.8
3,009,665	-				-1.0
3,009,665	-				+0.3
3,009,676	+				-0.6
3,009,676	+				+2.2
3,009,676	+				-0.6
3,009,676	+				+3.5
3,009,677	-				-1.2
3,009,677	-				-1.6
3,009,732	+		PFLU_RS13310	0.17	-0.8
3,009,732	+		PFLU_RS13310	0.17	+2.6
3,009,733	-		PFLU_RS13310	0.17	-1.9
3,009,744	+		PFLU_RS13310	0.20	-0.1
3,009,744	+		PFLU_RS13310	0.20	-1.4
3,009,744	+		PFLU_RS13310	0.20	-0.6
3,009,744	+		PFLU_RS13310	0.20	-0.6
3,009,745	-		PFLU_RS13310	0.20	-1.9
3,009,763	+		PFLU_RS13310	0.23	-1.7
3,009,763	+		PFLU_RS13310	0.23	-1.7
3,009,763	+		PFLU_RS13310	0.23	-2.5
3,009,763	+		PFLU_RS13310	0.23	-2.3
3,009,764	-		PFLU_RS13310	0.23	+1.8
3,009,764	-		PFLU_RS13310	0.23	+3.4
3,009,764	-		PFLU_RS13310	0.23	-0.0
3,009,820	+		PFLU_RS13310	0.34	+0.2
3,009,916	+		PFLU_RS13310	0.52	+0.8
3,009,916	+		PFLU_RS13310	0.52	-2.0
3,009,916	+		PFLU_RS13310	0.52	+0.6
3,009,916	+		PFLU_RS13310	0.52	+0.0
3,009,916	+		PFLU_RS13310	0.52	-0.8
3,009,916	+		PFLU_RS13310	0.52	+1.6
3,009,917	-		PFLU_RS13310	0.53	+0.3
3,009,917	-		PFLU_RS13310	0.53	+2.2
3,009,917	-		PFLU_RS13310	0.53	+2.2
3,009,917	-		PFLU_RS13310	0.53	+0.2
3,009,917	-		PFLU_RS13310	0.53	+0.2
3,009,917	-		PFLU_RS13310	0.53	-2.0
3,010,019	-		PFLU_RS13310	0.72	-0.6
3,010,019	-		PFLU_RS13310	0.72	-1.4
3,010,019	-		PFLU_RS13310	0.72	+0.8
3,010,019	-		PFLU_RS13310	0.72	-1.4
3,010,155	-				-0.2
3,010,167	+				-0.0
3,010,167	+				-0.7
3,010,167	+				-2.1
3,010,167	+				-1.2
3,010,167	+				+1.2
3,010,167	+				+2.3
3,010,167	+				-1.8
3,010,167	+				+0.6
3,010,168	-				-0.2
3,010,168	-				+1.8
3,010,168	-				+0.8
3,010,168	-				-1.6
3,010,168	-				-0.8
3,010,168	-				+0.9
3,010,168	-				+0.0
3,010,168	-				+0.8
3,010,184	-				+0.7
3,010,184	-				+2.2
3,010,209	+				-0.6
3,010,210	-				-1.2
3,010,356	+				-1.8
3,010,357	-				+1.8
3,010,836	+		PFLU_RS13315	0.69	-2.6
3,010,836	+		PFLU_RS13315	0.69	-0.1
3,010,837	-		PFLU_RS13315	0.69	-1.2
3,010,837	-		PFLU_RS13315	0.69	+3.0
3,010,837	-		PFLU_RS13315	0.69	-0.7
3,010,837	-		PFLU_RS13315	0.69	-0.0
3,010,869	+		PFLU_RS13315	0.74	+0.6
3,010,929	-		PFLU_RS13315	0.81	+1.8
3,011,049	+				+2.6
3,011,049	+				+1.8
3,011,049	+				-0.0
3,011,049	+				-2.0
3,011,049	+				+0.3
3,011,049	+				+0.5
3,011,049	+				-1.0
3,011,050	-				+3.3
3,011,050	-				+0.0
3,011,050	-				-0.2
3,011,050	-				-2.2
3,011,050	-				+1.3
3,011,050	-				-0.5
3,011,050	-				+1.0
3,011,050	-				+1.4
3,011,071	-				-1.4
3,011,071	-				+3.0
3,011,092	+				-0.9
3,011,093	-				-0.6
3,011,098	+				+0.8
3,011,098	+				+0.0
3,011,098	+				+0.8
3,011,098	+				+1.8
3,011,098	+				-2.2
3,011,099	-				+4.0
3,011,100	+				+0.2
3,011,101	-				+0.2
3,011,101	-				+2.5
3,011,108	+				+1.5
3,011,109	-				+0.3
3,011,142	+				-1.4
3,011,142	+				-0.4
3,011,143	-				+0.7
3,011,144	+				+1.6
3,011,156	+				-1.1
3,011,156	+				+3.0
3,011,171	+				-1.2
3,011,171	+				+2.8
3,011,171	+				+2.0
3,011,171	+				+0.4
3,011,171	+				+2.9
3,011,171	+				+0.0
3,011,171	+				-1.9
3,011,171	+				+2.8
3,011,171	+				+3.7
3,011,171	+				+3.6
3,011,171	+				+5.2
3,011,171	+				-1.9
3,011,171	+				+0.3
3,011,171	+				+1.8
3,011,171	+				+3.2
3,011,171	+				+1.5
3,011,171	+				-0.9
3,011,171	+				+1.9
3,011,171	+				+0.8
3,011,171	+				+1.8
3,011,171	+				+0.8
3,011,171	+				+2.8
3,011,171	+				+3.6
3,011,172	-				-1.6
3,011,172	-				+3.8
3,011,172	-				+0.2
3,011,172	-				+1.1
3,011,172	-				+2.3
3,011,172	-				-1.8
3,011,172	-				-0.6
3,011,172	-				-1.7
3,011,172	-				+4.2
3,011,172	-				+2.0
3,011,172	-				-1.9
3,011,172	-				-0.6
3,011,172	-				+0.0
3,011,175	+				+1.3
3,011,175	+				+0.8
3,011,175	+				+2.2
3,011,175	+				+1.2
3,011,175	+				+0.5
3,011,175	+				+2.5
3,011,175	+				+1.3
3,011,176	-				-0.2
3,011,176	-				+3.2
3,011,176	-				-0.8
3,011,176	-				+0.8
3,011,176	-				-1.8
3,011,176	-				+1.1
3,011,176	-				+2.4
3,011,176	-				+2.2
3,011,176	-				+2.9
3,011,176	-				+1.1
3,011,215	-				+1.3
3,011,219	+				+0.8
3,011,220	-				+2.1
3,011,220	-				-2.2
3,011,314	+		PFLU_RS13320	0.19	-2.9
3,011,315	-		PFLU_RS13320	0.19	-1.9
3,011,315	-		PFLU_RS13320	0.19	+1.1
3,011,315	-		PFLU_RS13320	0.19	+1.4
3,011,315	-		PFLU_RS13320	0.19	+0.8
3,011,315	-		PFLU_RS13320	0.19	+0.8
3,011,578	+		PFLU_RS13320	0.53	-0.6
3,011,578	+		PFLU_RS13320	0.53	+2.1
3,011,578	+		PFLU_RS13320	0.53	+0.8
3,011,579	-		PFLU_RS13320	0.53	+4.3
3,011,694	+		PFLU_RS13320	0.67	-1.4
3,011,694	+		PFLU_RS13320	0.67	+0.2
3,011,695	-		PFLU_RS13320	0.68	+2.0
3,011,695	-		PFLU_RS13320	0.68	-1.8
3,011,695	-		PFLU_RS13320	0.68	+2.5
3,011,695	-		PFLU_RS13320	0.68	-0.6
3,011,851	+		PFLU_RS13320	0.87	+0.8
3,011,851	+		PFLU_RS13320	0.87	+1.1
3,011,851	+		PFLU_RS13320	0.87	-2.1
3,011,851	+		PFLU_RS13320	0.87	-1.1
3,011,851	+		PFLU_RS13320	0.87	-1.1
3,011,851	+		PFLU_RS13320	0.87	+0.3
3,011,851	+		PFLU_RS13320	0.87	+0.4
3,011,851	+		PFLU_RS13320	0.87	-0.6
3,011,851	+		PFLU_RS13320	0.87	-1.4
3,011,851	+		PFLU_RS13320	0.87	-0.7
3,011,851	+		PFLU_RS13320	0.87	-1.6
3,011,851	+		PFLU_RS13320	0.87	-0.2
3,011,851	+		PFLU_RS13320	0.87	-1.7
3,011,851	+		PFLU_RS13320	0.87	-2.9
3,011,851	+		PFLU_RS13320	0.87	+1.9
3,011,851	+		PFLU_RS13320	0.87	-1.4
3,011,851	+		PFLU_RS13320	0.87	-0.7
3,011,852	-		PFLU_RS13320	0.88	-0.6
3,011,852	-		PFLU_RS13320	0.88	+4.3
3,011,852	-		PFLU_RS13320	0.88	-1.2
3,011,852	-		PFLU_RS13320	0.88	+1.2
3,011,852	-		PFLU_RS13320	0.88	+0.6
3,011,852	-		PFLU_RS13320	0.88	+0.1
3,011,852	-		PFLU_RS13320	0.88	+0.2
3,011,852	-		PFLU_RS13320	0.88	-0.2
3,011,852	-		PFLU_RS13320	0.88	+5.0
3,011,852	-		PFLU_RS13320	0.88	-0.8
3,011,852	-		PFLU_RS13320	0.88	+1.2
3,011,852	-		PFLU_RS13320	0.88	+2.4
3,011,852	-		PFLU_RS13320	0.88	-0.8
3,011,852	-		PFLU_RS13320	0.88	-2.1
3,011,852	-		PFLU_RS13320	0.88	+0.8
3,011,852	-		PFLU_RS13320	0.88	-0.8
3,011,852	-		PFLU_RS13320	0.88	-0.6
3,011,865	+		PFLU_RS13320	0.89	-0.8
3,011,865	+		PFLU_RS13320	0.89	-0.2
3,011,865	+		PFLU_RS13320	0.89	+0.8
3,011,865	+		PFLU_RS13320	0.89	-1.9
3,011,865	+		PFLU_RS13320	0.89	+1.4
3,011,866	-		PFLU_RS13320	0.89	-0.8
3,011,866	-		PFLU_RS13320	0.89	+4.1
3,011,866	-		PFLU_RS13320	0.89	+1.4
3,011,866	-		PFLU_RS13320	0.89	+0.9
3,011,972	+				+1.3
3,011,972	+				-1.4
3,011,972	+				-1.2
3,011,972	+				+1.1
3,011,972	+				+1.3
3,011,972	+				+2.8
3,011,973	-				+0.8
3,011,973	-				-0.8
3,011,973	-				-0.8
3,011,973	-				-0.2
3,011,973	-				+0.2
3,011,981	+				+1.8
3,011,981	+				+0.4
3,011,982	-				-0.8
3,011,982	-				-0.6
3,012,012	+				+0.8
3,012,013	-				+0.8
3,012,013	-				-1.4
3,012,041	+				-0.5