Experiment: L-Valine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02740 and PFLU_RS02745 overlap by 4 nucleotides PFLU_RS02745 and PFLU_RS30365 are separated by 205 nucleotides PFLU_RS30365 and PFLU_RS02750 are separated by 305 nucleotides
PFLU_RS02740: PFLU_RS02740 - ATP-binding cassette domain-containing protein, at 631,501 to 632,376
_RS02740
PFLU_RS02745: PFLU_RS02745 - ABC transporter ATP-binding protein, at 632,373 to 633,089
_RS02745
PFLU_RS30365: PFLU_RS30365 - hypothetical protein, at 633,295 to 633,525
_RS30365
PFLU_RS02750: PFLU_RS02750 - SDR family oxidoreductase, at 633,831 to 634,598
_RS02750
Position (kb) 633
634 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 632.345 kb on - strand at 632.372 kb on + strand at 632.372 kb on + strand at 632.372 kb on + strand at 632.372 kb on + strand at 632.372 kb on + strand at 632.372 kb on + strand at 632.373 kb on - strand at 632.373 kb on - strand at 632.373 kb on - strand at 632.373 kb on - strand at 632.373 kb on - strand at 632.373 kb on - strand at 632.373 kb on - strand at 632.384 kb on + strand at 632.384 kb on + strand at 632.384 kb on + strand at 632.384 kb on + strand at 632.384 kb on + strand at 632.385 kb on - strand at 632.385 kb on - strand at 632.415 kb on + strand at 632.415 kb on + strand at 632.416 kb on - strand at 632.416 kb on - strand at 632.416 kb on - strand at 632.416 kb on - strand at 632.416 kb on - strand at 632.416 kb on - strand at 632.416 kb on - strand at 632.489 kb on + strand, within PFLU_RS02745 at 632.562 kb on + strand, within PFLU_RS02745 at 632.562 kb on + strand, within PFLU_RS02745 at 632.562 kb on + strand, within PFLU_RS02745 at 632.563 kb on - strand, within PFLU_RS02745 at 632.563 kb on - strand, within PFLU_RS02745 at 632.563 kb on - strand, within PFLU_RS02745 at 632.563 kb on - strand, within PFLU_RS02745 at 632.563 kb on - strand, within PFLU_RS02745 at 632.579 kb on + strand, within PFLU_RS02745 at 632.579 kb on + strand, within PFLU_RS02745 at 632.580 kb on - strand, within PFLU_RS02745 at 632.580 kb on - strand, within PFLU_RS02745 at 632.580 kb on - strand, within PFLU_RS02745 at 632.580 kb on - strand, within PFLU_RS02745 at 632.580 kb on - strand, within PFLU_RS02745 at 632.580 kb on - strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.598 kb on + strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.599 kb on - strand, within PFLU_RS02745 at 632.765 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.994 kb on + strand, within PFLU_RS02745 at 632.995 kb on - strand, within PFLU_RS02745 at 632.995 kb on - strand, within PFLU_RS02745 at 632.995 kb on - strand, within PFLU_RS02745 at 632.995 kb on - strand, within PFLU_RS02745 at 632.995 kb on - strand, within PFLU_RS02745 at 632.995 kb on - strand, within PFLU_RS02745 at 633.072 kb on + strand at 633.072 kb on + strand at 633.072 kb on + strand at 633.072 kb on + strand at 633.073 kb on - strand at 633.073 kb on - strand at 633.092 kb on + strand at 633.092 kb on + strand at 633.092 kb on + strand at 633.092 kb on + strand at 633.093 kb on - strand at 633.093 kb on - strand at 633.093 kb on - strand at 633.093 kb on - strand at 633.093 kb on - strand at 633.099 kb on + strand at 633.099 kb on + strand at 633.099 kb on + strand at 633.100 kb on - strand at 633.100 kb on - strand at 633.163 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.229 kb on + strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.230 kb on - strand at 633.231 kb on + strand at 633.231 kb on + strand at 633.231 kb on + strand at 633.231 kb on + strand at 633.231 kb on + strand at 633.231 kb on + strand at 633.232 kb on - strand at 633.232 kb on - strand at 633.232 kb on - strand at 633.312 kb on - strand at 633.422 kb on + strand, within PFLU_RS30365 at 633.422 kb on + strand, within PFLU_RS30365 at 633.422 kb on + strand, within PFLU_RS30365 at 633.422 kb on + strand, within PFLU_RS30365 at 633.422 kb on + strand, within PFLU_RS30365 at 633.422 kb on + strand, within PFLU_RS30365 at 633.423 kb on - strand, within PFLU_RS30365 at 633.423 kb on - strand, within PFLU_RS30365 at 633.423 kb on - strand, within PFLU_RS30365 at 633.423 kb on - strand, within PFLU_RS30365 at 633.423 kb on - strand, within PFLU_RS30365 at 633.456 kb on + strand, within PFLU_RS30365 at 633.457 kb on - strand, within PFLU_RS30365 at 633.469 kb on - strand, within PFLU_RS30365 at 633.548 kb on + strand at 633.548 kb on + strand at 633.548 kb on + strand at 633.548 kb on + strand at 633.548 kb on + strand at 633.548 kb on + strand at 633.549 kb on - strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.552 kb on + strand at 633.553 kb on - strand at 633.553 kb on - strand at 633.553 kb on - strand at 633.553 kb on - strand at 633.553 kb on - strand at 633.553 kb on - strand at 633.553 kb on - strand at 633.585 kb on + strand at 633.586 kb on - strand at 633.597 kb on + strand at 633.597 kb on + strand at 633.597 kb on + strand at 633.598 kb on - strand at 633.608 kb on + strand at 633.608 kb on + strand at 633.608 kb on + strand at 633.608 kb on + strand at 633.609 kb on - strand at 633.609 kb on - strand at 633.609 kb on - strand at 633.609 kb on - strand at 633.609 kb on - strand at 633.609 kb on - strand at 633.611 kb on - strand at 633.611 kb on - strand at 633.611 kb on - strand at 633.611 kb on - strand at 633.700 kb on + strand at 633.780 kb on - strand at 633.848 kb on + strand at 633.848 kb on + strand at 633.848 kb on + strand at 633.848 kb on + strand at 633.849 kb on - strand at 633.849 kb on - strand at 633.849 kb on - strand at 633.849 kb on - strand at 633.849 kb on - strand at 633.849 kb on - strand at 633.849 kb on - strand at 633.852 kb on - strand at 634.261 kb on - strand, within PFLU_RS02750 at 634.261 kb on - strand, within PFLU_RS02750 at 634.284 kb on + strand, within PFLU_RS02750 at 634.284 kb on + strand, within PFLU_RS02750 at 634.284 kb on + strand, within PFLU_RS02750 at 634.284 kb on + strand, within PFLU_RS02750 at 634.284 kb on + strand, within PFLU_RS02750 at 634.285 kb on - strand, within PFLU_RS02750 at 634.285 kb on - strand, within PFLU_RS02750 at 634.285 kb on - strand, within PFLU_RS02750 at 634.285 kb on - strand, within PFLU_RS02750 at 634.285 kb on - strand, within PFLU_RS02750 at 634.431 kb on + strand, within PFLU_RS02750 at 634.431 kb on + strand, within PFLU_RS02750 at 634.431 kb on + strand, within PFLU_RS02750 at 634.431 kb on + strand, within PFLU_RS02750 at 634.432 kb on - strand, within PFLU_RS02750 at 634.432 kb on - strand, within PFLU_RS02750 at 634.432 kb on - strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.443 kb on + strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.444 kb on - strand, within PFLU_RS02750 at 634.523 kb on + strand at 634.523 kb on + strand at 634.524 kb on - strand at 634.524 kb on - strand at 634.524 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (C) remove 632,345 - +1.6 632,372 + +2.2 632,372 + -0.4 632,372 + +1.2 632,372 + -2.3 632,372 + +0.2 632,372 + -1.2 632,373 - -1.1 632,373 - -0.9 632,373 - -0.8 632,373 - -0.5 632,373 - +2.3 632,373 - +2.8 632,373 - -1.1 632,384 + -1.1 632,384 + -1.5 632,384 + +1.0 632,384 + -2.4 632,384 + +2.6 632,385 - -2.1 632,385 - +3.3 632,415 + +0.5 632,415 + -1.9 632,416 - -0.9 632,416 - +1.8 632,416 - -0.3 632,416 - -2.0 632,416 - -0.1 632,416 - +1.7 632,416 - +1.6 632,489 + PFLU_RS02745 0.16 -0.0 632,562 + PFLU_RS02745 0.26 +0.2 632,562 + PFLU_RS02745 0.26 -2.3 632,562 + PFLU_RS02745 0.26 +1.9 632,563 - PFLU_RS02745 0.26 +1.7 632,563 - PFLU_RS02745 0.26 +0.6 632,563 - PFLU_RS02745 0.26 -0.1 632,563 - PFLU_RS02745 0.26 +1.7 632,563 - PFLU_RS02745 0.26 +0.3 632,579 + PFLU_RS02745 0.29 +2.2 632,579 + PFLU_RS02745 0.29 -1.3 632,580 - PFLU_RS02745 0.29 +3.3 632,580 - PFLU_RS02745 0.29 +0.8 632,580 - PFLU_RS02745 0.29 -0.4 632,580 - PFLU_RS02745 0.29 -2.2 632,580 - PFLU_RS02745 0.29 +0.7 632,580 - PFLU_RS02745 0.29 +1.8 632,598 + PFLU_RS02745 0.31 -2.4 632,598 + PFLU_RS02745 0.31 +0.5 632,598 + PFLU_RS02745 0.31 +2.9 632,598 + PFLU_RS02745 0.31 +2.2 632,598 + PFLU_RS02745 0.31 +1.0 632,598 + PFLU_RS02745 0.31 -1.4 632,598 + PFLU_RS02745 0.31 -1.5 632,598 + PFLU_RS02745 0.31 -0.3 632,599 - PFLU_RS02745 0.32 +3.6 632,599 - PFLU_RS02745 0.32 +5.0 632,599 - PFLU_RS02745 0.32 -1.6 632,599 - PFLU_RS02745 0.32 -0.0 632,599 - PFLU_RS02745 0.32 -0.9 632,599 - PFLU_RS02745 0.32 -1.2 632,599 - PFLU_RS02745 0.32 +0.3 632,765 + PFLU_RS02745 0.55 -1.1 632,994 + PFLU_RS02745 0.87 -1.0 632,994 + PFLU_RS02745 0.87 -2.4 632,994 + PFLU_RS02745 0.87 +3.8 632,994 + PFLU_RS02745 0.87 +4.2 632,994 + PFLU_RS02745 0.87 +0.3 632,994 + PFLU_RS02745 0.87 +1.5 632,994 + PFLU_RS02745 0.87 -1.7 632,994 + PFLU_RS02745 0.87 +2.6 632,994 + PFLU_RS02745 0.87 -0.5 632,994 + PFLU_RS02745 0.87 +1.1 632,995 - PFLU_RS02745 0.87 -1.8 632,995 - PFLU_RS02745 0.87 -2.4 632,995 - PFLU_RS02745 0.87 -2.0 632,995 - PFLU_RS02745 0.87 -2.4 632,995 - PFLU_RS02745 0.87 -0.4 632,995 - PFLU_RS02745 0.87 -1.7 633,072 + +0.5 633,072 + -0.0 633,072 + +1.7 633,072 + +2.0 633,073 - -0.5 633,073 - +0.5 633,092 + +2.2 633,092 + +0.5 633,092 + +3.1 633,092 + -2.3 633,093 - -2.3 633,093 - -2.9 633,093 - +0.1 633,093 - +1.0 633,093 - -1.5 633,099 + -1.2 633,099 + +0.5 633,099 + -2.2 633,100 - -2.3 633,100 - -1.8 633,163 + +4.3 633,229 + +1.5 633,229 + +0.5 633,229 + +3.9 633,229 + -1.5 633,229 + -0.4 633,229 + +0.4 633,229 + -0.9 633,229 + -1.2 633,229 + +1.7 633,229 + +0.4 633,229 + -2.0 633,229 + -1.5 633,229 + +0.2 633,230 - -0.1 633,230 - -0.4 633,230 - +0.6 633,230 - +2.3 633,230 - -0.7 633,230 - -0.4 633,230 - +0.1 633,230 - +1.3 633,230 - -0.2 633,230 - -2.4 633,230 - +1.0 633,230 - +2.0 633,230 - +3.8 633,231 + +1.1 633,231 + -0.8 633,231 + +1.7 633,231 + -0.3 633,231 + +1.4 633,231 + +0.7 633,232 - +0.9 633,232 - -0.4 633,232 - -0.4 633,312 - -1.7 633,422 + PFLU_RS30365 0.55 -2.4 633,422 + PFLU_RS30365 0.55 -1.8 633,422 + PFLU_RS30365 0.55 +1.2 633,422 + PFLU_RS30365 0.55 +0.0 633,422 + PFLU_RS30365 0.55 -1.7 633,422 + PFLU_RS30365 0.55 -2.1 633,423 - PFLU_RS30365 0.55 +0.5 633,423 - PFLU_RS30365 0.55 -1.0 633,423 - PFLU_RS30365 0.55 +1.8 633,423 - PFLU_RS30365 0.55 -0.3 633,423 - PFLU_RS30365 0.55 -1.7 633,456 + PFLU_RS30365 0.70 -0.9 633,457 - PFLU_RS30365 0.70 -1.1 633,469 - PFLU_RS30365 0.75 +4.9 633,548 + -1.0 633,548 + -0.7 633,548 + -1.7 633,548 + +2.8 633,548 + -1.2 633,548 + -2.9 633,549 - +1.0 633,552 + -1.5 633,552 + +2.0 633,552 + +3.0 633,552 + -0.1 633,552 + -1.4 633,552 + -0.9 633,552 + +2.5 633,552 + -2.5 633,552 + -1.2 633,552 + -1.7 633,552 + -1.8 633,552 + +0.5 633,552 + -0.1 633,553 - +1.5 633,553 - +1.7 633,553 - -1.0 633,553 - -0.5 633,553 - -2.1 633,553 - -1.7 633,553 - +4.7 633,585 + -1.6 633,586 - -0.2 633,597 + +4.3 633,597 + +1.7 633,597 + -2.3 633,598 - -0.2 633,608 + -1.2 633,608 + -1.7 633,608 + +2.3 633,608 + -2.9 633,609 - +0.9 633,609 - -0.5 633,609 - -1.9 633,609 - +4.9 633,609 - +1.7 633,609 - -0.9 633,611 - +2.8 633,611 - -0.8 633,611 - +0.0 633,611 - -0.2 633,700 + +1.1 633,780 - -0.9 633,848 + +3.1 633,848 + +2.4 633,848 + -2.7 633,848 + +1.5 633,849 - -2.5 633,849 - -0.8 633,849 - -1.1 633,849 - +1.0 633,849 - +2.8 633,849 - +1.9 633,849 - +1.1 633,852 - +0.1 634,261 - PFLU_RS02750 0.56 -0.9 634,261 - PFLU_RS02750 0.56 +4.0 634,284 + PFLU_RS02750 0.59 +1.9 634,284 + PFLU_RS02750 0.59 -0.2 634,284 + PFLU_RS02750 0.59 -0.0 634,284 + PFLU_RS02750 0.59 +2.5 634,284 + PFLU_RS02750 0.59 -0.9 634,285 - PFLU_RS02750 0.59 -1.1 634,285 - PFLU_RS02750 0.59 -2.5 634,285 - PFLU_RS02750 0.59 -1.1 634,285 - PFLU_RS02750 0.59 +3.6 634,285 - PFLU_RS02750 0.59 -1.8 634,431 + PFLU_RS02750 0.78 +2.1 634,431 + PFLU_RS02750 0.78 +0.2 634,431 + PFLU_RS02750 0.78 -1.3 634,431 + PFLU_RS02750 0.78 +1.1 634,432 - PFLU_RS02750 0.78 -1.7 634,432 - PFLU_RS02750 0.78 -1.1 634,432 - PFLU_RS02750 0.78 +2.4 634,443 + PFLU_RS02750 0.80 -0.8 634,443 + PFLU_RS02750 0.80 -2.0 634,443 + PFLU_RS02750 0.80 -0.5 634,443 + PFLU_RS02750 0.80 -0.7 634,443 + PFLU_RS02750 0.80 +1.6 634,443 + PFLU_RS02750 0.80 +2.5 634,443 + PFLU_RS02750 0.80 +0.4 634,443 + PFLU_RS02750 0.80 -1.4 634,443 + PFLU_RS02750 0.80 +0.2 634,443 + PFLU_RS02750 0.80 -1.7 634,443 + PFLU_RS02750 0.80 -0.3 634,443 + PFLU_RS02750 0.80 +3.0 634,443 + PFLU_RS02750 0.80 +0.0 634,443 + PFLU_RS02750 0.80 +0.5 634,443 + PFLU_RS02750 0.80 -0.3 634,443 + PFLU_RS02750 0.80 +1.4 634,443 + PFLU_RS02750 0.80 +2.1 634,443 + PFLU_RS02750 0.80 -1.7 634,443 + PFLU_RS02750 0.80 +0.1 634,443 + PFLU_RS02750 0.80 +1.5 634,443 + PFLU_RS02750 0.80 -1.4 634,444 - PFLU_RS02750 0.80 +0.6 634,444 - PFLU_RS02750 0.80 +2.3 634,444 - PFLU_RS02750 0.80 +3.1 634,444 - PFLU_RS02750 0.80 +3.9 634,444 - PFLU_RS02750 0.80 -0.4 634,444 - PFLU_RS02750 0.80 +0.1 634,444 - PFLU_RS02750 0.80 -0.4 634,444 - PFLU_RS02750 0.80 +2.6 634,444 - PFLU_RS02750 0.80 -2.5 634,444 - PFLU_RS02750 0.80 -2.4 634,444 - PFLU_RS02750 0.80 +3.4 634,444 - PFLU_RS02750 0.80 +0.3 634,444 - PFLU_RS02750 0.80 -1.2 634,444 - PFLU_RS02750 0.80 +2.0 634,444 - PFLU_RS02750 0.80 +1.4 634,444 - PFLU_RS02750 0.80 +4.3 634,444 - PFLU_RS02750 0.80 +2.4 634,523 + +4.7 634,523 + +3.4 634,524 - +1.2 634,524 - -1.8 634,524 - +0.2
Or see this region's nucleotide sequence