Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22675

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
5,104,523	-		PFLU_RS22670	0.42	+0.9
5,104,603	+		PFLU_RS22670	0.48	-2.4
5,104,603	+		PFLU_RS22670	0.48	+2.6
5,104,603	+		PFLU_RS22670	0.48	-2.1
5,104,604	-		PFLU_RS22670	0.48	-0.6
5,104,604	-		PFLU_RS22670	0.48	-0.8
5,104,604	-		PFLU_RS22670	0.48	-1.9
5,104,604	-		PFLU_RS22670	0.48	+2.1
5,104,604	-		PFLU_RS22670	0.48	-0.4
5,104,744	+		PFLU_RS22670	0.57	+3.3
5,104,745	-		PFLU_RS22670	0.57	+1.5
5,104,745	-		PFLU_RS22670	0.57	+1.4
5,104,748	+		PFLU_RS22670	0.58	+1.2
5,104,748	+		PFLU_RS22670	0.58	-0.7
5,104,748	+		PFLU_RS22670	0.58	-1.0
5,104,748	+		PFLU_RS22670	0.58	+1.1
5,104,748	+		PFLU_RS22670	0.58	-0.4
5,104,748	+		PFLU_RS22670	0.58	-1.4
5,104,748	+		PFLU_RS22670	0.58	+1.5
5,104,748	+		PFLU_RS22670	0.58	+0.3
5,104,748	+		PFLU_RS22670	0.58	+1.3
5,104,748	+		PFLU_RS22670	0.58	-1.3
5,104,748	+		PFLU_RS22670	0.58	-0.2
5,104,748	+		PFLU_RS22670	0.58	+2.0
5,104,748	+		PFLU_RS22670	0.58	-1.9
5,104,748	+		PFLU_RS22670	0.58	-1.3
5,104,748	+		PFLU_RS22670	0.58	+2.6
5,104,748	+		PFLU_RS22670	0.58	-2.0
5,104,748	+		PFLU_RS22670	0.58	-0.3
5,104,748	+		PFLU_RS22670	0.58	-1.1
5,104,748	+		PFLU_RS22670	0.58	-0.6
5,104,748	+		PFLU_RS22670	0.58	+1.3
5,104,749	-		PFLU_RS22670	0.58	+0.9
5,104,749	-		PFLU_RS22670	0.58	+1.0
5,104,749	-		PFLU_RS22670	0.58	+2.2
5,104,749	-		PFLU_RS22670	0.58	+0.5
5,104,749	-		PFLU_RS22670	0.58	-0.2
5,104,749	-		PFLU_RS22670	0.58	+1.0
5,104,749	-		PFLU_RS22670	0.58	+1.0
5,104,749	-		PFLU_RS22670	0.58	+2.4
5,104,749	-		PFLU_RS22670	0.58	-1.3
5,104,749	-		PFLU_RS22670	0.58	-1.8
5,104,749	-		PFLU_RS22670	0.58	+2.7
5,104,883	+		PFLU_RS22670	0.67	-2.2
5,104,883	+		PFLU_RS22670	0.67	+2.1
5,104,883	+		PFLU_RS22670	0.67	-2.1
5,104,884	-		PFLU_RS22670	0.67	+2.4
5,104,954	-		PFLU_RS22670	0.71	+0.5
5,105,074	+		PFLU_RS22670	0.79	-2.1
5,105,074	+		PFLU_RS22670	0.79	-1.4
5,105,075	-		PFLU_RS22670	0.80	+1.4
5,105,075	-		PFLU_RS22670	0.80	+0.7
5,105,075	-		PFLU_RS22670	0.80	-0.2
5,105,075	-		PFLU_RS22670	0.80	+2.6
5,105,230	-				-0.0
5,105,230	-				-2.5
5,105,246	+				-0.0
5,105,246	+				+1.7
5,105,246	+				-0.5
5,105,246	+				+0.3
5,105,246	+				-0.2
5,105,246	+				-2.1
5,105,246	+				+0.6
5,105,246	+				+1.3
5,105,247	-				+0.3
5,105,247	-				+1.2
5,105,247	-				-1.7
5,105,247	-				-1.6
5,105,247	-				+0.6
5,105,247	-				+0.9
5,105,300	-				-2.1
5,105,311	+				+1.4
5,105,311	+				+3.6
5,105,311	+				+3.6
5,105,311	+				+0.2
5,105,311	+				-0.2
5,105,311	+				-0.2
5,105,311	+				-0.0
5,105,311	+				+0.3
5,105,311	+				+1.0
5,105,311	+				-2.6
5,105,311	+				+0.1
5,105,312	-				+0.6
5,105,312	-				-0.2
5,105,312	-				+0.4
5,105,312	-				-0.4
5,105,312	-				-0.6
5,105,312	-				+2.2
5,105,312	-				-1.7
5,105,312	-				-1.0
5,105,342	-				-0.9
5,105,385	+				-1.6
5,105,385	+				+1.6
5,105,386	-				-1.9
5,105,386	-				-1.5
5,105,386	-				-1.9
5,105,391	+				+1.4
5,105,391	+				-2.2
5,105,392	-				-0.0
5,105,392	-				+0.7
5,105,392	-				-0.5
5,105,404	+				+0.9
5,105,405	-				+1.6
5,105,522	+				-0.9
5,105,522	+				-1.3
5,105,522	+				-2.5
5,105,522	+				-2.2
5,105,523	-				+0.1
5,105,686	-		PFLU_RS22675	0.14	-1.7
5,105,849	+		PFLU_RS22675	0.28	-0.0
5,105,849	+		PFLU_RS22675	0.28	-0.0
5,105,849	+		PFLU_RS22675	0.28	+0.6
5,105,850	-		PFLU_RS22675	0.28	-0.7
5,105,920	-		PFLU_RS22675	0.34	+1.3
5,106,020	+		PFLU_RS22675	0.42	-0.7
5,106,286	-		PFLU_RS22675	0.64	-1.9
5,106,310	+		PFLU_RS22675	0.66	-0.4
5,106,421	-		PFLU_RS22675	0.76	-2.1
5,106,455	+		PFLU_RS22675	0.78	-0.4
5,106,455	+		PFLU_RS22675	0.78	-1.0
5,106,455	+		PFLU_RS22675	0.78	+0.6
5,106,456	-		PFLU_RS22675	0.79	-0.6
5,106,456	-		PFLU_RS22675	0.79	+0.3
5,106,546	+		PFLU_RS22675	0.86	-1.7
5,106,547	-		PFLU_RS22675	0.86	-0.2
5,106,551	+		PFLU_RS22675	0.86	+2.0
5,106,552	-		PFLU_RS22675	0.87	-0.9
5,106,552	-		PFLU_RS22675	0.87	-0.2
5,106,580	+		PFLU_RS22675	0.89	-0.2
5,106,580	+		PFLU_RS22675	0.89	-1.9
5,106,580	+		PFLU_RS22675	0.89	+1.0
5,106,581	-		PFLU_RS22675	0.89	-2.2
5,106,646	+				-0.6
5,106,647	-				-1.8
5,106,674	+				-0.2
5,106,674	+				+0.7
5,106,674	+				-1.2
5,106,674	+				+0.3
5,106,674	+				-1.3
5,106,674	+				+0.3
5,106,674	+				-0.4
5,106,674	+				-0.6
5,106,674	+				-1.7
5,106,674	+				-1.1
5,106,674	+				-0.9
5,106,674	+				+1.0
5,106,674	+				+1.0
5,106,674	+				-0.2
5,106,675	-				+1.0
5,106,675	-				+1.1
5,106,675	-				+2.2
5,106,675	-				-0.5
5,106,675	-				-0.4
5,106,675	-				-0.4
5,106,675	-				-2.1
5,106,675	-				-1.3
5,106,675	-				-0.9
5,106,675	-				+0.3
5,106,675	-				-0.7
5,106,675	-				+0.3
5,106,675	-				-0.8
5,106,675	-				-1.4
5,106,675	-				-0.5
5,106,700	+				-1.7
5,106,700	+				-2.1
5,106,700	+				-1.4
5,106,701	-				+0.3
5,106,701	-				+1.0
5,106,785	+				-1.6
5,106,786	-				-1.7
5,106,786	-				-0.3
5,106,786	-				-0.2
5,106,786	-				+2.3
5,106,786	-				+0.1
5,106,908	+				-0.2
5,106,908	+				-2.2
5,106,908	+				-0.0
5,106,908	+				+0.3
5,106,908	+				-0.4
5,106,908	+				-0.6
5,106,908	+				-2.2
5,106,908	+				-0.7
5,106,908	+				+1.6
5,106,908	+				-0.4
5,106,908	+				+1.0
5,106,908	+				-0.1
5,106,908	+				+1.6
5,106,908	+				+2.3
5,106,908	+				-1.0
5,106,909	-				-0.2
5,106,909	-				-0.0
5,106,909	-				-1.5
5,106,909	-				-1.0
5,106,909	-				-1.5
5,106,909	-				-0.2
5,106,909	-				-1.0
5,106,909	-				+1.8
5,106,909	-				-1.5
5,107,136	+		PFLU_RS22680	0.16	-2.3
5,107,136	+		PFLU_RS22680	0.16	-2.3
5,107,136	+		PFLU_RS22680	0.16	-1.6
5,107,136	+		PFLU_RS22680	0.16	-0.9
5,107,136	+		PFLU_RS22680	0.16	+0.6
5,107,137	-		PFLU_RS22680	0.16	-1.0
5,107,137	-		PFLU_RS22680	0.16	+2.1
5,107,137	-		PFLU_RS22680	0.16	-1.7
5,107,137	-		PFLU_RS22680	0.16	-0.6
5,107,137	-		PFLU_RS22680	0.16	-2.0
5,107,137	-		PFLU_RS22680	0.16	-0.2
5,107,137	-		PFLU_RS22680	0.16	-2.1
5,107,137	-		PFLU_RS22680	0.16	+1.0
5,107,137	-		PFLU_RS22680	0.16	+0.4
5,107,137	-		PFLU_RS22680	0.16	-0.7
5,107,301	+		PFLU_RS22680	0.22	+0.6
5,107,302	-		PFLU_RS22680	0.22	+0.1
5,107,302	-		PFLU_RS22680	0.22	-2.6
5,107,302	-		PFLU_RS22680	0.22	-1.0
5,107,302	-		PFLU_RS22680	0.22	-1.3
5,107,302	-		PFLU_RS22680	0.22	+0.6
5,107,302	-		PFLU_RS22680	0.22	-1.3
5,107,343	+		PFLU_RS22680	0.24	-0.4
5,107,344	-		PFLU_RS22680	0.24	-1.6
5,107,344	-		PFLU_RS22680	0.24	+1.0
5,107,344	-		PFLU_RS22680	0.24	-1.0
5,107,344	-		PFLU_RS22680	0.24	-2.2
5,107,493	+		PFLU_RS22680	0.30	-1.5
5,107,493	+		PFLU_RS22680	0.30	-0.7
5,107,493	+		PFLU_RS22680	0.30	-0.2
5,107,493	+		PFLU_RS22680	0.30	-1.2
5,107,493	+		PFLU_RS22680	0.30	-1.9
5,107,493	+		PFLU_RS22680	0.30	-1.6
5,107,493	+		PFLU_RS22680	0.30	-1.7
5,107,493	+		PFLU_RS22680	0.30	-0.0
5,107,493	+		PFLU_RS22680	0.30	+0.6
5,107,493	+		PFLU_RS22680	0.30	+0.6
5,107,493	+		PFLU_RS22680	0.30	+1.3
5,107,493	+		PFLU_RS22680	0.30	-1.2
5,107,493	+		PFLU_RS22680	0.30	-2.4
5,107,493	+		PFLU_RS22680	0.30	+2.6
5,107,493	+		PFLU_RS22680	0.30	-2.4
5,107,494	-		PFLU_RS22680	0.30	-1.2
5,107,494	-		PFLU_RS22680	0.30	-1.5
5,107,494	-		PFLU_RS22680	0.30	+1.6
5,107,494	-		PFLU_RS22680	0.30	-1.1
5,107,494	-		PFLU_RS22680	0.30	-0.2
5,107,494	-		PFLU_RS22680	0.30	-2.1
5,107,494	-		PFLU_RS22680	0.30	-0.3
5,107,494	-		PFLU_RS22680	0.30	-1.9
5,107,494	-		PFLU_RS22680	0.30	+1.0
5,107,494	-		PFLU_RS22680	0.30	-1.8
5,107,494	-		PFLU_RS22680	0.30	+2.6
5,107,494	-		PFLU_RS22680	0.30	-0.6
5,107,517	+		PFLU_RS22680	0.31	-1.4
5,107,571	+		PFLU_RS22680	0.33	+1.7
5,107,571	+		PFLU_RS22680	0.33	-1.2
5,107,571	+		PFLU_RS22680	0.33	-0.4
5,107,571	+		PFLU_RS22680	0.33	-1.6
5,107,571	+		PFLU_RS22680	0.33	-0.9
5,107,571	+		PFLU_RS22680	0.33	-0.0
5,107,571	+		PFLU_RS22680	0.33	-0.2
5,107,572	-		PFLU_RS22680	0.33	+1.4
5,107,572	-		PFLU_RS22680	0.33	-1.7
5,107,572	-		PFLU_RS22680	0.33	-1.2
5,107,572	-		PFLU_RS22680	0.33	-1.3
5,107,572	-		PFLU_RS22680	0.33	-1.0
5,107,572	-		PFLU_RS22680	0.33	+4.2
5,107,572	-		PFLU_RS22680	0.33	-1.6
5,107,572	-		PFLU_RS22680	0.33	-1.6