Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21080

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
4,735,373	-		PFLU_RS21070	0.77	-0.8
4,735,373	-		PFLU_RS21070	0.77	-2.2
4,735,467	-		PFLU_RS21070	0.88	+2.3
4,735,543	+				-0.6
4,735,543	+				-0.5
4,735,543	+				+2.0
4,735,544	-				-1.1
4,735,544	-				-1.4
4,735,604	+				-1.8
4,735,614	+				-0.9
4,735,614	+				-1.5
4,735,648	+				-0.5
4,735,648	+				+0.1
4,735,648	+				-1.4
4,735,648	+				+2.4
4,735,648	+				+3.9
4,735,648	+				+1.9
4,735,649	-				+0.8
4,735,649	-				-1.1
4,735,649	-				+1.4
4,735,649	-				-0.4
4,735,649	-				+0.1
4,735,649	-				-2.0
4,735,649	-				-0.2
4,735,649	-				+1.5
4,735,649	-				+0.2
4,735,649	-				+1.7
4,735,661	+				-2.0
4,735,661	+				+0.9
4,735,661	+				-0.9
4,735,661	+				+2.1
4,735,661	+				+2.7
4,735,661	+				-1.3
4,735,662	-				+2.4
4,735,662	-				+0.4
4,735,662	-				+1.1
4,735,662	-				+2.6
4,735,672	+				-0.8
4,735,673	-				-0.6
4,735,836	-		PFLU_RS21075	0.21	-2.5
4,735,876	-		PFLU_RS21075	0.27	-0.1
4,735,907	+		PFLU_RS21075	0.32	-0.6
4,735,907	+		PFLU_RS21075	0.32	-0.1
4,735,907	+		PFLU_RS21075	0.32	-2.2
4,735,907	+		PFLU_RS21075	0.32	-0.7
4,735,908	-		PFLU_RS21075	0.32	-2.3
4,735,908	-		PFLU_RS21075	0.32	+1.5
4,735,908	-		PFLU_RS21075	0.32	+1.3
4,735,908	-		PFLU_RS21075	0.32	-1.3
4,735,908	-		PFLU_RS21075	0.32	-0.6
4,735,908	-		PFLU_RS21075	0.32	+0.3
4,735,908	-		PFLU_RS21075	0.32	+0.6
4,735,908	-		PFLU_RS21075	0.32	+1.7
4,735,996	-		PFLU_RS21075	0.45	+1.0
4,736,084	+		PFLU_RS21075	0.58	-1.8
4,736,085	-		PFLU_RS21075	0.58	+0.8
4,736,085	-		PFLU_RS21075	0.58	-1.4
4,736,085	-		PFLU_RS21075	0.58	-1.5
4,736,191	-		PFLU_RS21075	0.74	+1.5
4,736,551	+		PFLU_RS21080	0.16	-1.6
4,736,551	+		PFLU_RS21080	0.16	-2.0
4,736,551	+		PFLU_RS21080	0.16	-0.2
4,736,551	+		PFLU_RS21080	0.16	-0.8
4,736,551	+		PFLU_RS21080	0.16	-0.2
4,736,552	-		PFLU_RS21080	0.16	-1.4
4,736,627	-		PFLU_RS21080	0.22	+3.0
4,736,627	-		PFLU_RS21080	0.22	-1.0
4,736,674	+		PFLU_RS21080	0.26	+0.4
4,736,674	+		PFLU_RS21080	0.26	-1.4
4,736,674	+		PFLU_RS21080	0.26	+1.1
4,736,674	+		PFLU_RS21080	0.26	-2.3
4,736,675	-		PFLU_RS21080	0.26	+4.1
4,736,675	-		PFLU_RS21080	0.26	-0.9
4,736,675	-		PFLU_RS21080	0.26	-0.7
4,736,675	-		PFLU_RS21080	0.26	-0.6
4,736,675	-		PFLU_RS21080	0.26	+0.4
4,736,675	-		PFLU_RS21080	0.26	-1.7
4,736,675	-		PFLU_RS21080	0.26	-0.5
4,736,675	-		PFLU_RS21080	0.26	-0.2
4,736,731	+		PFLU_RS21080	0.31	-1.3
4,736,731	+		PFLU_RS21080	0.31	-1.5
4,736,732	-		PFLU_RS21080	0.31	+2.1
4,736,732	-		PFLU_RS21080	0.31	-1.0
4,736,732	-		PFLU_RS21080	0.31	+2.2
4,736,785	-		PFLU_RS21080	0.35	-0.5
4,736,902	+		PFLU_RS21080	0.45	+0.9
4,736,902	+		PFLU_RS21080	0.45	+0.7
4,736,902	+		PFLU_RS21080	0.45	-1.8
4,736,902	+		PFLU_RS21080	0.45	+0.1
4,736,902	+		PFLU_RS21080	0.45	+0.1
4,736,903	-		PFLU_RS21080	0.45	+2.0
4,736,903	-		PFLU_RS21080	0.45	-1.2
4,736,980	+		PFLU_RS21080	0.51	+0.8
4,736,980	+		PFLU_RS21080	0.51	+0.2
4,736,995	+		PFLU_RS21080	0.53	+3.0
4,736,995	+		PFLU_RS21080	0.53	+3.7
4,736,995	+		PFLU_RS21080	0.53	-0.4
4,736,996	-		PFLU_RS21080	0.53	-1.4
4,737,253	+		PFLU_RS21080	0.74	-0.2
4,737,254	-		PFLU_RS21080	0.74	+2.8
4,737,254	-		PFLU_RS21080	0.74	+1.2
4,737,334	+		PFLU_RS21080	0.81	-1.7
4,737,334	+		PFLU_RS21080	0.81	-0.9
4,737,334	+		PFLU_RS21080	0.81	-1.4
4,737,334	+		PFLU_RS21080	0.81	-1.2
4,737,334	+		PFLU_RS21080	0.81	+1.4
4,737,335	-		PFLU_RS21080	0.81	-2.7
4,737,335	-		PFLU_RS21080	0.81	-1.8
4,737,335	-		PFLU_RS21080	0.81	-0.9
4,737,335	-		PFLU_RS21080	0.81	-0.2
4,737,335	-		PFLU_RS21080	0.81	+2.4
4,737,419	-		PFLU_RS21080	0.88	+0.4
4,737,433	+		PFLU_RS21080	0.89	+1.4
4,737,433	+		PFLU_RS21080	0.89	-0.8
4,737,463	+				-1.6
4,737,463	+				-1.5
4,737,478	+				+0.1
4,737,478	+				-1.2
4,737,478	+				+2.4
4,737,479	-				-2.8
4,737,479	-				-0.6
4,737,507	-				-1.3
4,737,507	-				-2.8
4,737,616	+				-0.8
4,737,617	-				+2.5
4,737,617	-				-0.8
4,737,617	-				+0.1
4,737,617	-				-1.4
4,737,629	+				+2.1
4,737,629	+				+1.6
4,737,629	+				+0.4
4,737,629	+				+1.5
4,737,630	-				+0.1
4,737,630	-				-1.3
4,737,630	-				+0.8
4,737,659	+				+0.4
4,737,659	+				+2.1
4,737,660	-				+1.0
4,737,804	-		PFLU_RS21085	0.11	-1.4
4,737,833	+		PFLU_RS21085	0.13	-0.5
4,737,834	-		PFLU_RS21085	0.13	-1.1
4,737,838	+		PFLU_RS21085	0.14	-1.5
4,737,838	+		PFLU_RS21085	0.14	-1.7
4,737,839	-		PFLU_RS21085	0.14	-0.1
4,737,839	-		PFLU_RS21085	0.14	-2.7
4,737,839	-		PFLU_RS21085	0.14	+0.1
4,737,918	+		PFLU_RS21085	0.20	-0.6
4,738,022	+		PFLU_RS21085	0.28	-1.6
4,738,022	+		PFLU_RS21085	0.28	-2.2
4,738,023	-		PFLU_RS21085	0.28	-0.2
4,738,023	-		PFLU_RS21085	0.28	-1.6
4,738,210	+		PFLU_RS21085	0.42	-0.1
4,738,211	-		PFLU_RS21085	0.43	+0.5
4,738,260	+		PFLU_RS21085	0.46	-0.4
4,738,356	+		PFLU_RS21085	0.54	+2.6
4,738,356	+		PFLU_RS21085	0.54	-0.4
4,738,356	+		PFLU_RS21085	0.54	-0.1
4,738,356	+		PFLU_RS21085	0.54	+1.8
4,738,357	-		PFLU_RS21085	0.54	-0.2
4,738,357	-		PFLU_RS21085	0.54	+0.5
4,738,357	-		PFLU_RS21085	0.54	+0.1
4,738,357	-		PFLU_RS21085	0.54	-0.4
4,738,357	-		PFLU_RS21085	0.54	-0.4
4,738,379	-		PFLU_RS21085	0.55	-1.1
4,738,379	-		PFLU_RS21085	0.55	-1.7
4,738,442	+		PFLU_RS21085	0.60	-1.4
4,738,442	+		PFLU_RS21085	0.60	-0.1
4,738,442	+		PFLU_RS21085	0.60	+1.0
4,738,443	-		PFLU_RS21085	0.60	-1.8
4,738,443	-		PFLU_RS21085	0.60	+1.3
4,738,443	-		PFLU_RS21085	0.60	-0.9
4,738,443	-		PFLU_RS21085	0.60	-0.8
4,738,443	-		PFLU_RS21085	0.60	-0.2
4,738,459	+		PFLU_RS21085	0.62	+0.6
4,738,459	+		PFLU_RS21085	0.62	+2.7
4,738,459	+		PFLU_RS21085	0.62	-1.1
4,738,460	-		PFLU_RS21085	0.62	-0.6
4,738,524	+		PFLU_RS21085	0.67	+2.4
4,738,524	+		PFLU_RS21085	0.67	-2.3
4,738,525	-		PFLU_RS21085	0.67	+0.4
4,738,525	-		PFLU_RS21085	0.67	-1.8