Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20815

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
4,680,146	+				-0.4
4,680,146	+				+0.3
4,680,146	+				+1.4
4,680,146	+				-1.8
4,680,146	+				-0.0
4,680,147	-				-1.2
4,680,147	-				-2.0
4,680,147	-				+1.5
4,680,147	-				+0.1
4,680,147	-				+1.4
4,680,174	+				+2.9
4,680,174	+				+1.3
4,680,174	+				+1.5
4,680,188	+				-0.9
4,680,188	+				+2.2
4,680,188	+				+0.7
4,680,188	+				-1.4
4,680,188	+				+1.8
4,680,189	-				-1.7
4,680,189	-				-1.9
4,680,232	+				-1.2
4,680,233	-				+1.4
4,680,233	-				+1.7
4,680,233	-				-1.5
4,680,233	-				-0.1
4,680,238	-				-1.5
4,680,247	+				+2.8
4,680,268	+				+0.8
4,680,268	+				+2.9
4,680,268	+				+0.4
4,680,269	-				+1.3
4,680,269	-				+0.8
4,680,269	-				-0.7
4,680,269	-				-2.0
4,680,269	-				+5.0
4,680,269	-				+3.2
4,680,269	-				-1.2
4,680,269	-				+3.3
4,680,269	-				-2.5
4,680,271	+				-1.0
4,680,272	-				+1.9
4,680,308	+				-2.2
4,680,308	+				-2.1
4,680,309	-				-1.7
4,680,309	-				+0.5
4,680,309	-				+1.6
4,680,309	-				+2.9
4,680,368	+				-0.4
4,680,368	+				-1.8
4,680,369	-				+0.8
4,680,369	-				+6.2
4,680,369	-				-1.7
4,680,384	-		PFLU_RS20810	0.10	-0.6
4,680,402	+		PFLU_RS20810	0.12	+0.1
4,680,402	+		PFLU_RS20810	0.12	+0.1
4,680,402	+		PFLU_RS20810	0.12	-0.9
4,680,402	+		PFLU_RS20810	0.12	+0.4
4,680,402	+		PFLU_RS20810	0.12	-1.7
4,680,402	+		PFLU_RS20810	0.12	-2.1
4,680,403	-		PFLU_RS20810	0.13	-0.7
4,680,403	-		PFLU_RS20810	0.13	+2.0
4,680,403	-		PFLU_RS20810	0.13	+2.4
4,680,403	-		PFLU_RS20810	0.13	-0.6
4,680,403	-		PFLU_RS20810	0.13	-1.3
4,680,403	-		PFLU_RS20810	0.13	-2.4
4,680,403	-		PFLU_RS20810	0.13	-1.4
4,680,403	-		PFLU_RS20810	0.13	+0.0
4,680,403	-		PFLU_RS20810	0.13	-1.4
4,680,403	-		PFLU_RS20810	0.13	-0.8
4,680,405	-		PFLU_RS20810	0.13	+1.5
4,680,469	+		PFLU_RS20810	0.22	-1.3
4,680,527	-		PFLU_RS20810	0.29	+0.3
4,680,527	-		PFLU_RS20810	0.29	+0.7
4,680,532	+		PFLU_RS20810	0.30	-1.2
4,680,532	+		PFLU_RS20810	0.30	-1.0
4,680,532	+		PFLU_RS20810	0.30	-0.2
4,680,532	+		PFLU_RS20810	0.30	-0.9
4,680,532	+		PFLU_RS20810	0.30	+0.1
4,680,532	+		PFLU_RS20810	0.30	+1.2
4,680,532	+		PFLU_RS20810	0.30	+0.2
4,680,533	-		PFLU_RS20810	0.30	-1.0
4,680,533	-		PFLU_RS20810	0.30	+2.0
4,680,533	-		PFLU_RS20810	0.30	+3.8
4,680,533	-		PFLU_RS20810	0.30	+1.7
4,680,533	-		PFLU_RS20810	0.30	+3.2
4,680,659	+		PFLU_RS20810	0.47	-0.9
4,680,660	-		PFLU_RS20810	0.47	-0.4
4,680,660	-		PFLU_RS20810	0.47	+0.8
4,680,660	-		PFLU_RS20810	0.47	+1.4
4,680,685	+		PFLU_RS20810	0.51	+0.7
4,680,685	+		PFLU_RS20810	0.51	+2.5
4,680,685	+		PFLU_RS20810	0.51	+1.4
4,680,686	-		PFLU_RS20810	0.51	-1.7
4,680,716	+		PFLU_RS20810	0.55	-0.0
4,680,740	+		PFLU_RS20810	0.58	-0.4
4,680,740	+		PFLU_RS20810	0.58	+1.6
4,680,771	+		PFLU_RS20810	0.62	-2.1
4,680,771	+		PFLU_RS20810	0.62	+3.9
4,680,772	-		PFLU_RS20810	0.62	-2.0
4,680,772	-		PFLU_RS20810	0.62	-1.0
4,680,810	+		PFLU_RS20810	0.67	+3.1
4,680,810	+		PFLU_RS20810	0.67	+1.5
4,680,810	+		PFLU_RS20810	0.67	+2.7
4,680,811	-		PFLU_RS20810	0.67	-0.4
4,680,812	+		PFLU_RS20810	0.68	-1.5
4,680,813	-		PFLU_RS20810	0.68	-1.1
4,680,837	+		PFLU_RS20810	0.71	+0.1
4,680,837	+		PFLU_RS20810	0.71	+0.1
4,680,837	+		PFLU_RS20810	0.71	+5.3
4,680,838	-		PFLU_RS20810	0.71	-1.7
4,680,838	-		PFLU_RS20810	0.71	+1.1
4,680,838	-		PFLU_RS20810	0.71	-0.4
4,680,838	-		PFLU_RS20810	0.71	+1.3
4,680,838	-		PFLU_RS20810	0.71	+0.5
4,680,841	+		PFLU_RS20810	0.72	-0.4
4,680,856	+		PFLU_RS20810	0.74	+0.8
4,680,856	+		PFLU_RS20810	0.74	+3.6
4,680,857	-		PFLU_RS20810	0.74	-2.0
4,680,857	-		PFLU_RS20810	0.74	-2.2
4,680,870	-		PFLU_RS20810	0.75	+1.2
4,680,875	+		PFLU_RS20810	0.76	-2.4
4,680,876	-		PFLU_RS20810	0.76	+1.4
4,680,974	+		PFLU_RS20810	0.89	-0.4
4,681,022	+				-1.9
4,681,022	+				-0.4
4,681,023	-				+1.1
4,681,041	+				+1.4
4,681,041	+				+2.7
4,681,056	+				+0.9
4,681,057	-				+2.4
4,681,064	+				+1.8
4,681,065	-				-0.4
4,681,065	-				+1.8
4,681,124	+		PFLU_RS20815	0.13	+1.0
4,681,125	-		PFLU_RS20815	0.14	+0.1
4,681,125	-		PFLU_RS20815	0.14	-1.8
4,681,134	+		PFLU_RS20815	0.16	-1.3
4,681,134	+		PFLU_RS20815	0.16	+1.2
4,681,135	-		PFLU_RS20815	0.16	+0.3
4,681,135	-		PFLU_RS20815	0.16	+0.1
4,681,135	-		PFLU_RS20815	0.16	-0.7
4,681,257	+		PFLU_RS20815	0.47	-2.1
4,681,257	+		PFLU_RS20815	0.47	+1.7
4,681,257	+		PFLU_RS20815	0.47	+0.3
4,681,258	-		PFLU_RS20815	0.47	+4.1
4,681,258	-		PFLU_RS20815	0.47	-1.3
4,681,258	-		PFLU_RS20815	0.47	-2.0
4,681,258	-		PFLU_RS20815	0.47	+0.1
4,681,258	-		PFLU_RS20815	0.47	-1.7
4,681,258	-		PFLU_RS20815	0.47	-1.0
4,681,305	+		PFLU_RS20815	0.58	+0.4
4,681,305	+		PFLU_RS20815	0.58	+2.7
4,681,305	+		PFLU_RS20815	0.58	+0.4
4,681,305	+		PFLU_RS20815	0.58	+0.8
4,681,305	+		PFLU_RS20815	0.58	-0.2
4,681,305	+		PFLU_RS20815	0.58	-0.4
4,681,306	-		PFLU_RS20815	0.59	+2.4
4,681,306	-		PFLU_RS20815	0.59	-0.6
4,681,306	-		PFLU_RS20815	0.59	-1.6
4,681,306	-		PFLU_RS20815	0.59	-1.2
4,681,323	-		PFLU_RS20815	0.63	+2.1
4,681,377	+		PFLU_RS20815	0.76	-2.1
4,681,378	-		PFLU_RS20815	0.77	-0.6
4,681,378	-		PFLU_RS20815	0.77	-2.6
4,681,378	-		PFLU_RS20815	0.77	-1.3
4,681,382	+		PFLU_RS20815	0.78	+0.1
4,681,382	+		PFLU_RS20815	0.78	-1.3
4,681,383	-		PFLU_RS20815	0.78	-1.4
4,681,383	-		PFLU_RS20815	0.78	-2.1
4,681,383	-		PFLU_RS20815	0.78	+3.1
4,681,394	+		PFLU_RS20815	0.81	+3.6
4,681,395	-		PFLU_RS20815	0.81	-0.6
4,681,397	+		PFLU_RS20815	0.81	+1.8
4,681,398	-		PFLU_RS20815	0.82	-1.8
4,681,398	-		PFLU_RS20815	0.82	-0.6
4,681,398	-		PFLU_RS20815	0.82	+1.6
4,681,427	+		PFLU_RS20815	0.89	-2.0
4,681,445	+				-0.6
4,681,486	+				+1.4
4,681,486	+				+0.9
4,681,486	+				-1.3
4,681,487	-				+0.5
4,681,487	-				+1.0
4,681,501	+				-0.7
4,681,501	+				+1.1
4,681,501	+				-0.7
4,681,501	+				-0.2
4,681,501	+				+3.1
4,681,513	-				-2.6
4,681,513	-				-2.5
4,681,670	+		PFLU_RS20820	0.21	+2.7
4,681,670	+		PFLU_RS20820	0.21	+3.9
4,681,670	+		PFLU_RS20820	0.21	-1.2
4,681,671	-		PFLU_RS20820	0.21	+1.1
4,681,671	-		PFLU_RS20820	0.21	-0.7
4,681,671	-		PFLU_RS20820	0.21	-1.2
4,681,673	+		PFLU_RS20820	0.21	-1.0
4,681,673	+		PFLU_RS20820	0.21	-2.5
4,681,674	-		PFLU_RS20820	0.21	-2.1
4,681,674	-		PFLU_RS20820	0.21	-1.2
4,681,674	-		PFLU_RS20820	0.21	+0.1
4,681,744	+		PFLU_RS20820	0.28	+0.4
4,681,744	+		PFLU_RS20820	0.28	-0.2
4,681,815	+		PFLU_RS20820	0.35	-1.6
4,681,816	-		PFLU_RS20820	0.36	+2.2
4,681,988	+		PFLU_RS20820	0.53	-0.6
4,681,989	-		PFLU_RS20820	0.53	-1.9
4,682,016	+		PFLU_RS20820	0.56	-1.7
4,682,127	+		PFLU_RS20820	0.67	-1.8
4,682,127	+		PFLU_RS20820	0.67	+0.9
4,682,128	-		PFLU_RS20820	0.67	+0.5
4,682,128	-		PFLU_RS20820	0.67	-1.7
4,682,128	-		PFLU_RS20820	0.67	-1.0
4,682,128	-		PFLU_RS20820	0.67	+0.1
4,682,140	+		PFLU_RS20820	0.69	-0.9
4,682,140	+		PFLU_RS20820	0.69	+0.9
4,682,140	+		PFLU_RS20820	0.69	-0.1
4,682,140	+		PFLU_RS20820	0.69	-1.1
4,682,140	+		PFLU_RS20820	0.69	+1.6
4,682,140	+		PFLU_RS20820	0.69	+0.3
4,682,140	+		PFLU_RS20820	0.69	+1.6
4,682,140	+		PFLU_RS20820	0.69	+0.8
4,682,140	+		PFLU_RS20820	0.69	+0.1
4,682,140	+		PFLU_RS20820	0.69	-1.2
4,682,140	+		PFLU_RS20820	0.69	+1.2
4,682,140	+		PFLU_RS20820	0.69	+1.9
4,682,140	+		PFLU_RS20820	0.69	-1.3
4,682,140	+		PFLU_RS20820	0.69	-0.7
4,682,140	+		PFLU_RS20820	0.69	+2.2
4,682,140	+		PFLU_RS20820	0.69	+2.1
4,682,140	+		PFLU_RS20820	0.69	+1.0
4,682,140	+		PFLU_RS20820	0.69	-0.7
4,682,140	+		PFLU_RS20820	0.69	+2.1
4,682,140	+		PFLU_RS20820	0.69	-0.2
4,682,140	+		PFLU_RS20820	0.69	+3.5
4,682,140	+		PFLU_RS20820	0.69	-0.4
4,682,140	+		PFLU_RS20820	0.69	+5.6
4,682,140	+		PFLU_RS20820	0.69	+1.1
4,682,140	+		PFLU_RS20820	0.69	+0.3
4,682,140	+		PFLU_RS20820	0.69	-0.4
4,682,141	-		PFLU_RS20820	0.69	-0.2
4,682,141	-		PFLU_RS20820	0.69	+0.5
4,682,141	-		PFLU_RS20820	0.69	+0.8
4,682,141	-		PFLU_RS20820	0.69	-1.8
4,682,141	-		PFLU_RS20820	0.69	+2.9
4,682,141	-		PFLU_RS20820	0.69	+2.0
4,682,141	-		PFLU_RS20820	0.69	-2.2
4,682,141	-		PFLU_RS20820	0.69	-0.6
4,682,141	-		PFLU_RS20820	0.69	+1.4
4,682,141	-		PFLU_RS20820	0.69	+1.4
4,682,141	-		PFLU_RS20820	0.69	+1.7
4,682,141	-		PFLU_RS20820	0.69	+0.1
4,682,141	-		PFLU_RS20820	0.69	+4.1
4,682,141	-		PFLU_RS20820	0.69	+3.6
4,682,141	-		PFLU_RS20820	0.69	-1.4
4,682,141	-		PFLU_RS20820	0.69	-1.5
4,682,141	-		PFLU_RS20820	0.69	+0.8
4,682,141	-		PFLU_RS20820	0.69	-0.5
4,682,149	-		PFLU_RS20820	0.70	+0.8
4,682,252	+		PFLU_RS20820	0.80	-1.2
4,682,252	+		PFLU_RS20820	0.80	-0.6
4,682,252	+		PFLU_RS20820	0.80	+1.0
4,682,252	+		PFLU_RS20820	0.80	+5.3
4,682,253	-		PFLU_RS20820	0.80	-0.6
4,682,253	-		PFLU_RS20820	0.80	+0.1
4,682,253	-		PFLU_RS20820	0.80	-1.5
4,682,253	-		PFLU_RS20820	0.80	-0.6
4,682,253	-		PFLU_RS20820	0.80	-0.4
4,682,253	-		PFLU_RS20820	0.80	+1.7
4,682,260	-		PFLU_RS20820	0.81	-0.7
4,682,302	+		PFLU_RS20820	0.85	-2.4
4,682,308	+		PFLU_RS20820	0.86	+3.4
4,682,308	+		PFLU_RS20820	0.86	+0.8
4,682,308	+		PFLU_RS20820	0.86	-0.9
4,682,309	-		PFLU_RS20820	0.86	+0.4
4,682,310	+		PFLU_RS20820	0.86	+0.7
4,682,311	-		PFLU_RS20820	0.86	-0.6
4,682,429	+				+2.6
4,682,443	+				+0.6
4,682,443	+				-0.4
4,682,443	+				-0.6
4,682,443	+				+2.4
4,682,443	+				-1.6
4,682,443	+				-0.6
4,682,444	-				-1.2
4,682,444	-				+1.9