Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09145

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
2,027,683	+		PFLU_RS09140	0.21	+0.3
2,027,683	+		PFLU_RS09140	0.21	+1.6
2,027,683	+		PFLU_RS09140	0.21	+1.0
2,027,683	+		PFLU_RS09140	0.21	+1.9
2,027,683	+		PFLU_RS09140	0.21	-0.2
2,027,683	+		PFLU_RS09140	0.21	+4.7
2,027,683	+		PFLU_RS09140	0.21	+3.0
2,027,683	+		PFLU_RS09140	0.21	-2.0
2,027,683	+		PFLU_RS09140	0.21	-1.0
2,027,683	+		PFLU_RS09140	0.21	-1.4
2,027,684	-		PFLU_RS09140	0.21	-1.2
2,027,684	-		PFLU_RS09140	0.21	+0.4
2,027,684	-		PFLU_RS09140	0.21	-1.5
2,027,684	-		PFLU_RS09140	0.21	+3.5
2,027,684	-		PFLU_RS09140	0.21	-1.2
2,027,684	-		PFLU_RS09140	0.21	+0.6
2,027,713	+		PFLU_RS09140	0.25	+1.3
2,027,901	+		PFLU_RS09140	0.49	-1.2
2,027,901	+		PFLU_RS09140	0.49	-1.2
2,027,901	+		PFLU_RS09140	0.49	+1.5
2,027,901	+		PFLU_RS09140	0.49	+2.6
2,027,901	+		PFLU_RS09140	0.49	-0.2
2,027,901	+		PFLU_RS09140	0.49	+1.0
2,027,902	-		PFLU_RS09140	0.49	-0.5
2,027,902	-		PFLU_RS09140	0.49	+2.7
2,027,902	-		PFLU_RS09140	0.49	-1.2
2,027,902	-		PFLU_RS09140	0.49	+0.8
2,027,902	-		PFLU_RS09140	0.49	+0.9
2,027,902	-		PFLU_RS09140	0.49	+0.8
2,028,003	-		PFLU_RS09140	0.62	-0.9
2,028,003	-		PFLU_RS09140	0.62	+1.6
2,028,090	-		PFLU_RS09140	0.74	+3.6
2,028,170	+		PFLU_RS09140	0.84	+0.9
2,028,227	+				-2.2
2,028,227	+				+0.0
2,028,227	+				+1.8
2,028,227	+				-1.2
2,028,227	+				+0.3
2,028,227	+				-2.2
2,028,227	+				+2.3
2,028,227	+				-0.5
2,028,227	+				-0.7
2,028,227	+				+0.8
2,028,227	+				-0.8
2,028,227	+				+0.0
2,028,227	+				-2.2
2,028,228	-				+2.3
2,028,228	-				-0.5
2,028,228	-				+1.8
2,028,228	-				+0.0
2,028,228	-				-2.7
2,028,228	-				+0.8
2,028,228	-				+3.0
2,028,228	-				+0.2
2,028,228	-				+0.6
2,028,229	+				-0.7
2,028,229	+				-1.6
2,028,229	+				-0.4
2,028,229	+				+0.0
2,028,229	+				+5.0
2,028,229	+				-0.5
2,028,229	+				+0.3
2,028,229	+				+0.6
2,028,230	-				-1.1
2,028,230	-				+3.3
2,028,230	-				+0.5
2,028,230	-				+1.3
2,028,230	-				+1.3
2,028,230	-				+1.8
2,028,230	-				+0.0
2,028,230	-				+0.9
2,028,230	-				-0.8
2,028,246	+				+1.3
2,028,246	+				-0.7
2,028,246	+				-0.5
2,028,247	-				-1.8
2,028,247	-				-0.2
2,028,247	-				-1.4
2,028,247	-				+1.8
2,028,249	+				+1.3
2,028,249	+				+1.0
2,028,249	+				+0.9
2,028,249	+				+0.6
2,028,250	-				-1.8
2,028,250	-				+3.3
2,028,250	-				-0.7
2,028,250	-				+0.3
2,028,250	-				+1.6
2,028,261	+				-0.2
2,028,261	+				-1.1
2,028,261	+				+1.1
2,028,262	-				-1.0
2,028,265	-				+3.2
2,028,308	+				+2.9
2,028,308	+				-0.7
2,028,308	+				-2.1
2,028,308	+				-0.8
2,028,309	-				-0.4
2,028,310	+				+1.8
2,028,310	+				-3.3
2,028,310	+				-2.6
2,028,310	+				+0.4
2,028,311	-				-3.0
2,028,311	-				-1.7
2,028,311	-				+1.4
2,028,311	-				+1.8
2,028,311	-				-1.7
2,028,317	+				+2.1
2,028,317	+				-0.5
2,028,317	+				+0.6
2,028,317	+				-3.1
2,028,317	+				+1.8
2,028,317	+				+2.3
2,028,318	-				-1.9
2,028,318	-				+5.6
2,028,329	+				+0.1
2,028,330	-				+1.3
2,028,330	-				-2.7
2,028,330	-				+1.4
2,028,330	-				+4.1
2,028,378	+				-0.8
2,028,379	-				+3.4
2,028,379	-				-2.5
2,028,379	-				+1.9
2,028,379	-				+0.9
2,028,391	+				-0.5
2,028,391	+				+0.8
2,028,391	+				-1.7
2,028,391	+				-2.4
2,028,391	+				+3.5
2,028,392	-				-2.7
2,028,392	-				+2.0
2,028,393	+				-0.2
2,028,393	+				-1.6
2,028,393	+				-1.5
2,028,393	+				-1.9
2,028,393	+				-0.7
2,028,393	+				-0.5
2,028,393	+				-1.1
2,028,393	+				+3.4
2,028,393	+				-0.5
2,028,393	+				-1.0
2,028,393	+				+2.3
2,028,393	+				+2.6
2,028,393	+				+2.1
2,028,393	+				+0.3
2,028,393	+				-0.7
2,028,393	+				-0.8
2,028,393	+				-1.9
2,028,393	+				+1.1
2,028,394	-				-1.5
2,028,394	-				+2.3
2,028,394	-				+0.6
2,028,394	-				-3.2
2,028,394	-				+0.3
2,028,394	-				-1.4
2,028,394	-				-1.1
2,028,394	-				+0.0
2,028,394	-				+0.3
2,028,394	-				-2.2
2,028,394	-				+2.0
2,028,394	-				-1.7
2,028,394	-				-1.7
2,028,394	-				-0.2
2,028,394	-				+1.2
2,028,394	-				-1.5
2,028,394	-				+2.1
2,028,394	-				+0.8
2,028,394	-				+1.3
2,028,394	-				-2.2
2,028,394	-				-1.2
2,028,394	-				-0.9
2,028,394	-				+1.3
2,028,397	+				-1.1
2,028,397	+				+4.3
2,028,397	+				+0.8
2,028,398	-				+2.0
2,028,398	-				-0.2
2,028,398	-				+0.1
2,028,398	-				+1.6
2,028,398	-				-0.2
2,028,446	+				+1.8
2,028,446	+				+0.3
2,028,446	+				-2.8
2,028,446	+				-1.1
2,028,446	+				+0.0
2,028,446	+				-0.7
2,028,446	+				+2.8
2,028,446	+				-1.1
2,028,447	-				-2.4
2,028,447	-				-0.2
2,028,447	-				+1.4
2,028,447	-				+1.0
2,028,447	-				+1.7
2,028,447	-				+0.0
2,028,448	+				+2.3
2,028,449	-				+0.0
2,028,449	-				-1.6
2,028,449	-				+0.3
2,028,449	-				-2.2
2,028,449	-				+1.6
2,028,471	+				+1.0
2,028,471	+				+1.0
2,028,471	+				+0.0
2,028,471	+				-0.8
2,028,472	-				+1.8
2,028,472	-				+0.1
2,028,472	-				+0.5
2,028,473	+				-1.5
2,028,473	+				+0.5
2,028,473	+				+1.3
2,028,473	+				+2.2
2,028,473	+				-0.4
2,028,474	-				+3.5
2,028,474	-				+1.3
2,028,474	-				-0.2
2,028,474	-				+0.3
2,028,474	-				-1.1
2,028,474	-				+1.1
2,028,508	+				-0.2
2,028,509	-				+0.1
2,028,601	+				+0.3
2,028,646	+				+1.3
2,028,646	+				+3.3
2,028,646	+				-1.5
2,028,646	+				-1.0
2,028,646	+				-1.2
2,028,646	+				-1.7
2,028,646	+				+1.3
2,028,646	+				+1.3
2,028,646	+				+0.8
2,028,820	+				-1.9
2,028,836	+				-1.5
2,028,836	+				-1.1
2,028,856	+				-1.5
2,028,856	+				-0.6
2,028,888	+				-0.6
2,028,888	+				+1.5
2,028,888	+				-0.5
2,028,888	+				+1.5
2,028,888	+				-1.2
2,028,888	+				-1.4
2,028,888	+				-0.7
2,029,122	+				-1.2
2,029,122	+				+1.3
2,029,122	+				-1.4
2,029,122	+				+0.0
2,029,122	+				+1.0
2,029,123	-				+0.8
2,029,257	+				-1.4
2,029,257	+				-0.2
2,029,257	+				+0.9
2,029,257	+				-0.2
2,029,258	-				-0.8
2,029,274	+				+0.8
2,029,274	+				-0.3
2,029,274	+				-1.5
2,029,274	+				+1.6
2,029,275	-				-0.2
2,029,278	+				-0.6
2,029,278	+				-2.7
2,029,278	+				-1.2
2,029,278	+				-0.3
2,029,279	-				+1.3
2,029,279	-				+0.8
2,029,279	-				+0.8
2,029,451	+		PFLU_RS09165	0.16	-1.0
2,029,451	+		PFLU_RS09165	0.16	+2.1
2,029,452	-		PFLU_RS09165	0.16	-2.0
2,029,452	-		PFLU_RS09165	0.16	+1.3
2,029,452	-		PFLU_RS09165	0.16	+0.8
2,029,452	-		PFLU_RS09165	0.16	+1.5
2,029,552	+		PFLU_RS09165	0.22	+2.9
2,029,552	+		PFLU_RS09165	0.22	+4.2
2,029,552	+		PFLU_RS09165	0.22	-0.2
2,029,552	+		PFLU_RS09165	0.22	+2.1
2,029,553	-		PFLU_RS09165	0.22	+2.5
2,029,553	-		PFLU_RS09165	0.22	+2.3
2,029,553	-		PFLU_RS09165	0.22	-1.2
2,029,553	-		PFLU_RS09165	0.22	-0.8
2,029,608	+		PFLU_RS09165	0.25	-2.2
2,029,608	+		PFLU_RS09165	0.25	-1.0
2,029,608	+		PFLU_RS09165	0.25	+3.5
2,029,608	+		PFLU_RS09165	0.25	-0.8
2,029,608	+		PFLU_RS09165	0.25	+0.0
2,029,609	-		PFLU_RS09165	0.25	+0.6
2,029,609	-		PFLU_RS09165	0.25	-0.5
2,029,609	-		PFLU_RS09165	0.25	-2.1
2,029,645	-		PFLU_RS09165	0.27	+0.0
2,029,664	+		PFLU_RS09165	0.29	+0.0
2,029,665	-		PFLU_RS09165	0.29	+0.0
2,029,691	+		PFLU_RS09165	0.30	-1.7
2,029,710	+		PFLU_RS09165	0.31	+0.5
2,029,710	+		PFLU_RS09165	0.31	+0.0
2,029,710	+		PFLU_RS09165	0.31	-0.1
2,029,711	-		PFLU_RS09165	0.31	+4.2