Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08550

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,904,487	+		PFLU_RS08540	0.46	-2.3
1,904,488	-		PFLU_RS08540	0.46	+0.4
1,904,500	+		PFLU_RS08540	0.48	-1.8
1,904,500	+		PFLU_RS08540	0.48	-0.6
1,904,546	+		PFLU_RS08540	0.53	-0.4
1,904,557	+		PFLU_RS08540	0.54	-0.4
1,904,557	+		PFLU_RS08540	0.54	-0.2
1,904,557	+		PFLU_RS08540	0.54	-2.3
1,904,557	+		PFLU_RS08540	0.54	+0.9
1,904,558	-		PFLU_RS08540	0.54	-1.6
1,904,558	-		PFLU_RS08540	0.54	-1.1
1,904,558	-		PFLU_RS08540	0.54	+1.2
1,904,558	-		PFLU_RS08540	0.54	+0.1
1,904,601	+		PFLU_RS08540	0.59	-1.8
1,904,601	+		PFLU_RS08540	0.59	-0.8
1,904,601	+		PFLU_RS08540	0.59	+0.6
1,904,601	+		PFLU_RS08540	0.59	+0.6
1,904,601	+		PFLU_RS08540	0.59	-1.9
1,904,601	+		PFLU_RS08540	0.59	+1.2
1,904,601	+		PFLU_RS08540	0.59	-1.0
1,904,602	-		PFLU_RS08540	0.59	+0.4
1,904,602	-		PFLU_RS08540	0.59	-1.1
1,904,602	-		PFLU_RS08540	0.59	-2.1
1,904,602	-		PFLU_RS08540	0.59	+0.5
1,904,602	-		PFLU_RS08540	0.59	-2.0
1,904,602	-		PFLU_RS08540	0.59	-2.0
1,904,602	-		PFLU_RS08540	0.59	-0.8
1,904,602	-		PFLU_RS08540	0.59	-0.3
1,904,602	-		PFLU_RS08540	0.59	+0.2
1,904,602	-		PFLU_RS08540	0.59	-3.5
1,904,602	-		PFLU_RS08540	0.59	-0.1
1,904,602	-		PFLU_RS08540	0.59	+2.1
1,904,602	-		PFLU_RS08540	0.59	-0.1
1,904,609	+		PFLU_RS08540	0.60	-0.1
1,904,609	+		PFLU_RS08540	0.60	+2.8
1,904,609	+		PFLU_RS08540	0.60	+1.6
1,904,609	+		PFLU_RS08540	0.60	+2.1
1,904,610	-		PFLU_RS08540	0.60	+1.3
1,904,610	-		PFLU_RS08540	0.60	-3.2
1,904,610	-		PFLU_RS08540	0.60	-1.7
1,904,610	-		PFLU_RS08540	0.60	-0.0
1,904,756	+		PFLU_RS08540	0.76	+0.9
1,904,756	+		PFLU_RS08540	0.76	+2.9
1,904,757	-		PFLU_RS08540	0.77	+4.3
1,904,757	-		PFLU_RS08540	0.77	+1.5
1,904,757	-		PFLU_RS08540	0.77	-1.5
1,904,757	-		PFLU_RS08540	0.77	-2.6
1,904,972	+				+2.5
1,904,972	+				+0.4
1,904,972	+				+3.6
1,904,972	+				-0.4
1,904,972	+				-0.5
1,904,972	+				+1.9
1,904,972	+				+4.7
1,904,972	+				+1.9
1,904,972	+				-1.1
1,904,973	-				+0.8
1,904,973	-				-0.4
1,904,973	-				-0.7
1,904,973	-				-1.3
1,904,973	-				-1.5
1,904,973	-				-2.6
1,904,973	-				-1.6
1,904,973	-				+0.3
1,904,973	-				+0.7
1,905,124	+		PFLU_RS08545	0.34	-0.7
1,905,124	+		PFLU_RS08545	0.34	+1.0
1,905,124	+		PFLU_RS08545	0.34	-1.5
1,905,124	+		PFLU_RS08545	0.34	+0.0
1,905,125	-		PFLU_RS08545	0.34	-1.4
1,905,125	-		PFLU_RS08545	0.34	+0.5
1,905,125	-		PFLU_RS08545	0.34	+0.9
1,905,378	+		PFLU_RS08545	0.86	-1.4
1,905,378	+		PFLU_RS08545	0.86	-1.9
1,905,379	-		PFLU_RS08545	0.86	-2.3
1,905,581	+				+0.2
1,905,582	-				+2.9
1,905,996	+		PFLU_RS08550	0.14	-0.4
1,905,996	+		PFLU_RS08550	0.14	-0.7
1,905,996	+		PFLU_RS08550	0.14	-0.9
1,905,997	-		PFLU_RS08550	0.14	-2.6
1,905,997	-		PFLU_RS08550	0.14	+1.0
1,906,023	+		PFLU_RS08550	0.15	-2.4
1,906,023	+		PFLU_RS08550	0.15	+1.7
1,906,202	+		PFLU_RS08550	0.20	-1.0
1,906,303	+		PFLU_RS08550	0.23	-0.7
1,906,303	+		PFLU_RS08550	0.23	-0.7
1,906,303	+		PFLU_RS08550	0.23	+0.5
1,906,303	+		PFLU_RS08550	0.23	-1.0
1,906,304	-		PFLU_RS08550	0.23	-0.8
1,906,304	-		PFLU_RS08550	0.23	-1.5
1,906,304	-		PFLU_RS08550	0.23	+4.0
1,906,304	-		PFLU_RS08550	0.23	+2.1
1,906,304	-		PFLU_RS08550	0.23	-0.7
1,906,304	-		PFLU_RS08550	0.23	-1.9
1,906,304	-		PFLU_RS08550	0.23	+0.9
1,906,304	-		PFLU_RS08550	0.23	-1.5
1,906,304	-		PFLU_RS08550	0.23	-0.1
1,906,304	-		PFLU_RS08550	0.23	-0.7
1,906,360	+		PFLU_RS08550	0.24	+1.1
1,906,360	+		PFLU_RS08550	0.24	+4.5
1,906,361	-		PFLU_RS08550	0.25	-1.9
1,906,361	-		PFLU_RS08550	0.25	+0.9
1,906,456	+		PFLU_RS08550	0.27	+0.6
1,906,520	+		PFLU_RS08550	0.29	+2.5
1,906,520	+		PFLU_RS08550	0.29	-2.5
1,906,520	+		PFLU_RS08550	0.29	+0.2
1,906,520	+		PFLU_RS08550	0.29	-1.6
1,906,520	+		PFLU_RS08550	0.29	+1.6
1,906,521	-		PFLU_RS08550	0.29	-1.5
1,906,521	-		PFLU_RS08550	0.29	+0.8
1,906,521	-		PFLU_RS08550	0.29	-0.1
1,906,521	-		PFLU_RS08550	0.29	-1.1
1,906,521	-		PFLU_RS08550	0.29	+0.3
1,906,521	-		PFLU_RS08550	0.29	+0.9
1,906,521	-		PFLU_RS08550	0.29	+0.5
1,906,538	+		PFLU_RS08550	0.29	-2.0
1,906,538	+		PFLU_RS08550	0.29	-2.1
1,906,538	+		PFLU_RS08550	0.29	-0.5
1,906,538	+		PFLU_RS08550	0.29	-1.1
1,906,539	-		PFLU_RS08550	0.29	-0.1
1,906,539	-		PFLU_RS08550	0.29	+1.8
1,906,539	-		PFLU_RS08550	0.29	-1.7
1,906,724	+		PFLU_RS08550	0.34	+2.5
1,906,724	+		PFLU_RS08550	0.34	-1.0
1,906,824	+		PFLU_RS08550	0.37	-2.7
1,906,824	+		PFLU_RS08550	0.37	-1.5
1,906,825	-		PFLU_RS08550	0.37	-1.0
1,906,825	-		PFLU_RS08550	0.37	+0.6
1,906,825	-		PFLU_RS08550	0.37	-1.4
1,906,825	-		PFLU_RS08550	0.37	-1.8
1,906,915	+		PFLU_RS08550	0.40	+0.6
1,906,915	+		PFLU_RS08550	0.40	-2.3
1,906,916	-		PFLU_RS08550	0.40	-1.5
1,906,916	-		PFLU_RS08550	0.40	-2.1
1,906,916	-		PFLU_RS08550	0.40	-1.6
1,906,919	+		PFLU_RS08550	0.40	+1.5
1,906,919	+		PFLU_RS08550	0.40	+0.5
1,906,919	+		PFLU_RS08550	0.40	-1.6
1,906,919	+		PFLU_RS08550	0.40	-0.4
1,906,919	+		PFLU_RS08550	0.40	+0.9
1,906,919	+		PFLU_RS08550	0.40	-2.1
1,906,919	+		PFLU_RS08550	0.40	-2.7
1,906,919	+		PFLU_RS08550	0.40	+0.1
1,906,919	+		PFLU_RS08550	0.40	-0.0
1,906,919	+		PFLU_RS08550	0.40	+2.7
1,906,920	-		PFLU_RS08550	0.40	+1.0
1,906,920	-		PFLU_RS08550	0.40	-0.9
1,906,920	-		PFLU_RS08550	0.40	-0.5
1,906,920	-		PFLU_RS08550	0.40	-0.4
1,906,920	-		PFLU_RS08550	0.40	-1.0
1,906,920	-		PFLU_RS08550	0.40	+1.2
1,906,920	-		PFLU_RS08550	0.40	-1.8
1,906,920	-		PFLU_RS08550	0.40	+1.0
1,906,920	-		PFLU_RS08550	0.40	-1.1
1,906,920	-		PFLU_RS08550	0.40	-1.8
1,906,920	-		PFLU_RS08550	0.40	+0.8
1,906,920	-		PFLU_RS08550	0.40	-1.5
1,906,920	-		PFLU_RS08550	0.40	-0.9
1,906,920	-		PFLU_RS08550	0.40	-1.4
1,907,054	+		PFLU_RS08550	0.44	+0.6
1,907,054	+		PFLU_RS08550	0.44	+0.3
1,907,054	+		PFLU_RS08550	0.44	+0.6
1,907,055	-		PFLU_RS08550	0.44	+2.5
1,907,055	-		PFLU_RS08550	0.44	-1.7
1,907,055	-		PFLU_RS08550	0.44	-0.1
1,907,055	-		PFLU_RS08550	0.44	+0.9
1,907,055	-		PFLU_RS08550	0.44	-1.5
1,907,055	-		PFLU_RS08550	0.44	-0.9
1,907,055	-		PFLU_RS08550	0.44	-0.4
1,907,077	-		PFLU_RS08550	0.44	-1.1
1,907,094	+		PFLU_RS08550	0.45	-0.7
1,907,094	+		PFLU_RS08550	0.45	-1.0
1,907,094	+		PFLU_RS08550	0.45	-0.7
1,907,095	-		PFLU_RS08550	0.45	+1.9
1,907,095	-		PFLU_RS08550	0.45	-0.4
1,907,107	+		PFLU_RS08550	0.45	+1.1
1,907,108	-		PFLU_RS08550	0.45	+0.2
1,907,108	-		PFLU_RS08550	0.45	+1.6
1,907,108	-		PFLU_RS08550	0.45	-1.9
1,907,108	-		PFLU_RS08550	0.45	+0.5
1,907,119	+		PFLU_RS08550	0.45	-1.4
1,907,120	-		PFLU_RS08550	0.45	-1.5
1,907,121	+		PFLU_RS08550	0.45	+2.6
1,907,121	+		PFLU_RS08550	0.45	+1.4
1,907,121	+		PFLU_RS08550	0.45	-2.4
1,907,121	+		PFLU_RS08550	0.45	+2.3
1,907,121	+		PFLU_RS08550	0.45	-0.4
1,907,121	+		PFLU_RS08550	0.45	+0.9
1,907,121	+		PFLU_RS08550	0.45	+1.2
1,907,121	+		PFLU_RS08550	0.45	-1.1
1,907,121	+		PFLU_RS08550	0.45	-1.3
1,907,121	+		PFLU_RS08550	0.45	-0.1
1,907,121	+		PFLU_RS08550	0.45	-0.5
1,907,121	+		PFLU_RS08550	0.45	+0.5
1,907,121	+		PFLU_RS08550	0.45	+1.3
1,907,121	+		PFLU_RS08550	0.45	+0.0
1,907,121	+		PFLU_RS08550	0.45	-0.1
1,907,121	+		PFLU_RS08550	0.45	-0.5
1,907,122	-		PFLU_RS08550	0.45	+1.1
1,907,122	-		PFLU_RS08550	0.45	+2.1
1,907,122	-		PFLU_RS08550	0.45	-1.4
1,907,122	-		PFLU_RS08550	0.45	+0.4
1,907,122	-		PFLU_RS08550	0.45	+2.2
1,907,122	-		PFLU_RS08550	0.45	-1.8
1,907,122	-		PFLU_RS08550	0.45	-1.1
1,907,122	-		PFLU_RS08550	0.45	+2.4
1,907,122	-		PFLU_RS08550	0.45	-1.1
1,907,122	-		PFLU_RS08550	0.45	-2.2
1,907,122	-		PFLU_RS08550	0.45	+1.1
1,907,122	-		PFLU_RS08550	0.45	+0.0
1,907,173	-		PFLU_RS08550	0.47	+0.5
1,907,184	+		PFLU_RS08550	0.47	-1.7
1,907,184	+		PFLU_RS08550	0.47	-0.9
1,907,184	+		PFLU_RS08550	0.47	-0.5
1,907,184	+		PFLU_RS08550	0.47	+0.1
1,907,184	+		PFLU_RS08550	0.47	+2.8
1,907,184	+		PFLU_RS08550	0.47	+1.5
1,907,184	+		PFLU_RS08550	0.47	+0.9
1,907,185	-		PFLU_RS08550	0.47	-0.4
1,907,185	-		PFLU_RS08550	0.47	+0.3
1,907,185	-		PFLU_RS08550	0.47	-1.1
1,907,274	+		PFLU_RS08550	0.50	+0.1
1,907,274	+		PFLU_RS08550	0.50	+0.1
1,907,274	+		PFLU_RS08550	0.50	-1.4
1,907,274	+		PFLU_RS08550	0.50	-1.5
1,907,274	+		PFLU_RS08550	0.50	+1.0
1,907,274	+		PFLU_RS08550	0.50	-3.2
1,907,274	+		PFLU_RS08550	0.50	-2.2
1,907,274	+		PFLU_RS08550	0.50	-0.4
1,907,274	+		PFLU_RS08550	0.50	-0.1
1,907,274	+		PFLU_RS08550	0.50	-2.0
1,907,274	+		PFLU_RS08550	0.50	-1.4
1,907,274	+		PFLU_RS08550	0.50	-2.5
1,907,274	+		PFLU_RS08550	0.50	+0.5
1,907,274	+		PFLU_RS08550	0.50	-0.6
1,907,275	-		PFLU_RS08550	0.50	+4.3
1,907,275	-		PFLU_RS08550	0.50	-0.4
1,907,275	-		PFLU_RS08550	0.50	+2.5
1,907,275	-		PFLU_RS08550	0.50	+4.1
1,907,275	-		PFLU_RS08550	0.50	+3.4
1,907,275	-		PFLU_RS08550	0.50	-2.3
1,907,275	-		PFLU_RS08550	0.50	+0.6
1,907,275	-		PFLU_RS08550	0.50	+1.1
1,907,275	-		PFLU_RS08550	0.50	+3.3
1,907,275	-		PFLU_RS08550	0.50	-1.5
1,907,275	-		PFLU_RS08550	0.50	+0.9
1,907,275	-		PFLU_RS08550	0.50	-0.9
1,907,305	+		PFLU_RS08550	0.50	+0.8
1,907,305	+		PFLU_RS08550	0.50	+1.2
1,907,306	-		PFLU_RS08550	0.50	+0.9
1,907,315	+		PFLU_RS08550	0.51	-1.5
1,907,315	+		PFLU_RS08550	0.51	-2.3
1,907,315	+		PFLU_RS08550	0.51	-2.6
1,907,315	+		PFLU_RS08550	0.51	-1.4
1,907,315	+		PFLU_RS08550	0.51	-1.0
1,907,315	+		PFLU_RS08550	0.51	-1.1
1,907,315	+		PFLU_RS08550	0.51	-2.6
1,907,315	+		PFLU_RS08550	0.51	-0.5
1,907,315	+		PFLU_RS08550	0.51	+3.6
1,907,315	+		PFLU_RS08550	0.51	+2.5
1,907,315	+		PFLU_RS08550	0.51	+1.8
1,907,315	+		PFLU_RS08550	0.51	+1.5
1,907,315	+		PFLU_RS08550	0.51	+0.9
1,907,315	+		PFLU_RS08550	0.51	-0.5
1,907,315	+		PFLU_RS08550	0.51	-1.8
1,907,315	+		PFLU_RS08550	0.51	-1.6
1,907,315	+		PFLU_RS08550	0.51	+1.2
1,907,315	+		PFLU_RS08550	0.51	-1.9
1,907,315	+		PFLU_RS08550	0.51	-1.9
1,907,315	+		PFLU_RS08550	0.51	-0.7
1,907,315	+		PFLU_RS08550	0.51	-2.5
1,907,315	+		PFLU_RS08550	0.51	+4.1
1,907,315	+		PFLU_RS08550	0.51	-1.5
1,907,315	+		PFLU_RS08550	0.51	-1.0
1,907,315	+		PFLU_RS08550	0.51	-1.6
1,907,315	+		PFLU_RS08550	0.51	-1.5
1,907,315	+		PFLU_RS08550	0.51	-1.5
1,907,315	+		PFLU_RS08550	0.51	-0.1
1,907,316	-		PFLU_RS08550	0.51	+3.3
1,907,316	-		PFLU_RS08550	0.51	-0.4
1,907,316	-		PFLU_RS08550	0.51	+2.7
1,907,316	-		PFLU_RS08550	0.51	-1.1
1,907,316	-		PFLU_RS08550	0.51	-1.9
1,907,316	-		PFLU_RS08550	0.51	-1.0
1,907,316	-		PFLU_RS08550	0.51	-1.6
1,907,316	-		PFLU_RS08550	0.51	+2.1
1,907,316	-		PFLU_RS08550	0.51	+2.5
1,907,316	-		PFLU_RS08550	0.51	+2.2
1,907,316	-		PFLU_RS08550	0.51	+3.3
1,907,316	-		PFLU_RS08550	0.51	-0.7
1,907,316	-		PFLU_RS08550	0.51	-0.6
1,907,316	-		PFLU_RS08550	0.51	+0.9
1,907,316	-		PFLU_RS08550	0.51	+0.8
1,907,316	-		PFLU_RS08550	0.51	+0.6
1,907,316	-		PFLU_RS08550	0.51	-1.5
1,907,316	-		PFLU_RS08550	0.51	+0.1
1,907,316	-		PFLU_RS08550	0.51	-0.9
1,907,316	-		PFLU_RS08550	0.51	-0.4
1,907,316	-		PFLU_RS08550	0.51	-2.3
1,907,316	-		PFLU_RS08550	0.51	+1.0
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1,909,092	-				-0.6
1,909,094	-				+1.4
1,909,094	-				+1.4
1,909,121	-				+0.8
1,909,146	+				+2.0
1,909,204	+		PFLU_RS08555	0.14	+1.6
1,909,277	-		PFLU_RS08555	0.26	-2.5
1,909,277	-		PFLU_RS08555	0.26	-0.9
1,909,340	-		PFLU_RS08555	0.36	+2.0
1,909,340	-		PFLU_RS08555	0.36	-0.1
1,909,341	+		PFLU_RS08555	0.36	+0.4
1,909,373	+		PFLU_RS08555	0.41	+1.2
1,909,373	+		PFLU_RS08555	0.41	+1.4
1,909,373	+		PFLU_RS08555	0.41	+2.8
1,909,373	+		PFLU_RS08555	0.41	-0.6
1,909,374	-		PFLU_RS08555	0.41	-0.4
1,909,374	-		PFLU_RS08555	0.41	-1.3
1,909,374	-		PFLU_RS08555	0.41	+1.6
1,909,377	+		PFLU_RS08555	0.42	+4.3
1,909,377	+		PFLU_RS08555	0.42	-1.5
1,909,377	+		PFLU_RS08555	0.42	-1.1
1,909,377	+		PFLU_RS08555	0.42	+2.4
1,909,377	+		PFLU_RS08555	0.42	-2.1
1,909,377	+		PFLU_RS08555	0.42	+2.9
1,909,377	+		PFLU_RS08555	0.42	+0.3
1,909,378	-		PFLU_RS08555	0.42	-1.3
1,909,378	-		PFLU_RS08555	0.42	+2.1
1,909,378	-		PFLU_RS08555	0.42	+0.9
1,909,378	-		PFLU_RS08555	0.42	-1.4
1,909,379	+		PFLU_RS08555	0.42	-1.0
1,909,379	+		PFLU_RS08555	0.42	-1.8
1,909,380	-		PFLU_RS08555	0.42	+1.4
1,909,442	+		PFLU_RS08555	0.52	-1.6
1,909,442	+		PFLU_RS08555	0.52	-0.7
1,909,442	+		PFLU_RS08555	0.52	+0.1
1,909,442	+		PFLU_RS08555	0.52	-0.9
1,909,442	+		PFLU_RS08555	0.52	+0.4
1,909,443	-		PFLU_RS08555	0.52	+1.0
1,909,443	-		PFLU_RS08555	0.52	-1.5
1,909,524	+		PFLU_RS08555	0.65	+3.0
1,909,524	+		PFLU_RS08555	0.65	-0.1
1,909,524	+		PFLU_RS08555	0.65	-0.1
1,909,524	+		PFLU_RS08555	0.65	-1.1
1,909,524	+		PFLU_RS08555	0.65	+1.0
1,909,524	+		PFLU_RS08555	0.65	+5.2
1,909,524	+		PFLU_RS08555	0.65	+4.0
1,909,524	+		PFLU_RS08555	0.65	-1.1
1,909,525	-		PFLU_RS08555	0.66	-0.4
1,909,525	-		PFLU_RS08555	0.66	+3.4
1,909,525	-		PFLU_RS08555	0.66	-0.4
1,909,525	-		PFLU_RS08555	0.66	-2.9
1,909,525	-		PFLU_RS08555	0.66	-1.6
1,909,525	-		PFLU_RS08555	0.66	+0.5
1,909,525	-		PFLU_RS08555	0.66	-2.1
1,909,525	-		PFLU_RS08555	0.66	+3.8
1,909,525	-		PFLU_RS08555	0.66	-0.1
1,909,575	+		PFLU_RS08555	0.74	+3.3
1,909,575	+		PFLU_RS08555	0.74	+2.3
1,909,575	+		PFLU_RS08555	0.74	+2.4
1,909,575	+		PFLU_RS08555	0.74	-2.1
1,909,590	+		PFLU_RS08555	0.76	+0.1
1,909,664	+		PFLU_RS08555	0.88	+0.1
1,909,665	-		PFLU_RS08555	0.88	+0.9
1,909,665	-		PFLU_RS08555	0.88	+1.6
1,909,702	+				-1.8
1,909,702	+				-1.8
1,909,746	+				+0.3
1,909,747	-				+0.4
1,909,779	+				-0.1
1,909,780	-				-0.1
1,909,780	-				-0.4
1,909,824	+				-1.4
1,909,849	-				-1.4
1,909,861	+				-1.1
1,909,861	+				-0.4
1,909,861	+				+1.2
1,909,862	-				+0.9
1,909,862	-				-0.9
1,909,865	+				+0.6
1,909,866	-				-1.3
1,909,866	-				+0.1
1,909,875	+				+1.3
1,909,921	+				-1.0
1,909,921	+				-0.7
1,909,955	-				+2.0
1,909,962	+				+0.6
1,909,963	-				-0.6
1,909,963	-				-0.4
1,909,984	+				-1.5
1,909,992	+				-1.6
1,910,057	+		PFLU_RS08560	0.16	+0.9
1,910,057	+		PFLU_RS08560	0.16	+1.5
1,910,061	+		PFLU_RS08560	0.17	+1.1
1,910,061	+		PFLU_RS08560	0.17	-2.5
1,910,062	-		PFLU_RS08560	0.18	+2.3