Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05735

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,292,261	+				-0.7
1,292,261	+				-1.8
1,292,261	+				+0.3
1,292,261	+				-2.7
1,292,261	+				-0.6
1,292,261	+				+1.8
1,292,261	+				-1.7
1,292,262	-				-0.8
1,292,262	-				+2.6
1,292,262	-				-0.2
1,292,262	-				+1.8
1,292,262	-				+0.1
1,292,262	-				+1.7
1,292,262	-				+2.9
1,292,262	-				-2.3
1,292,262	-				-1.5
1,292,262	-				+1.5
1,292,270	+				-0.9
1,292,270	+				-0.7
1,292,270	+				+2.9
1,292,270	+				+3.8
1,292,271	-				-0.3
1,292,271	-				+0.9
1,292,271	-				+0.3
1,292,301	+				-0.8
1,292,301	+				-1.5
1,292,301	+				+1.8
1,292,301	+				-1.0
1,292,302	-				+1.1
1,292,302	-				-0.3
1,292,302	-				+0.6
1,292,302	-				-1.4
1,292,316	-				-1.5
1,292,319	+				+1.3
1,292,319	+				+0.7
1,292,319	+				+2.7
1,292,319	+				-0.3
1,292,319	+				+0.9
1,292,320	-				+4.2
1,292,320	-				+2.2
1,292,320	-				+0.8
1,292,349	+				+0.5
1,292,360	-				+2.2
1,292,388	+				-1.4
1,292,389	-				-0.8
1,292,445	+				-1.9
1,292,445	+				+1.7
1,292,454	+				-0.2
1,292,470	+				+2.1
1,292,470	+				+0.3
1,292,523	-				+0.7
1,292,570	+				+1.9
1,292,571	-				-0.2
1,292,571	-				-0.9
1,292,571	-				+2.3
1,292,592	+		PFLU_RS05730	0.12	+3.3
1,292,593	-		PFLU_RS05730	0.12	+1.0
1,292,593	-		PFLU_RS05730	0.12	+1.4
1,292,651	+		PFLU_RS05730	0.21	-0.1
1,292,652	-		PFLU_RS05730	0.21	-1.8
1,292,652	-		PFLU_RS05730	0.21	+0.3
1,292,669	-		PFLU_RS05730	0.24	-1.3
1,292,708	+		PFLU_RS05730	0.30	-1.4
1,292,709	-		PFLU_RS05730	0.30	-0.5
1,292,820	+		PFLU_RS05730	0.48	+0.7
1,292,820	+		PFLU_RS05730	0.48	-2.2
1,292,820	+		PFLU_RS05730	0.48	-0.5
1,292,820	+		PFLU_RS05730	0.48	-2.0
1,292,820	+		PFLU_RS05730	0.48	+1.3
1,292,820	+		PFLU_RS05730	0.48	-0.5
1,292,821	-		PFLU_RS05730	0.48	+0.5
1,292,821	-		PFLU_RS05730	0.48	+0.7
1,292,821	-		PFLU_RS05730	0.48	-1.4
1,292,821	-		PFLU_RS05730	0.48	+0.8
1,292,821	-		PFLU_RS05730	0.48	+1.7
1,292,821	-		PFLU_RS05730	0.48	-0.0
1,292,821	-		PFLU_RS05730	0.48	+1.8
1,292,821	-		PFLU_RS05730	0.48	-0.7
1,292,851	+		PFLU_RS05730	0.53	+1.3
1,292,851	+		PFLU_RS05730	0.53	-1.9
1,292,852	-		PFLU_RS05730	0.53	+3.1
1,292,852	-		PFLU_RS05730	0.53	+1.9
1,292,883	+		PFLU_RS05730	0.58	+0.3
1,292,889	+		PFLU_RS05730	0.59	-0.5
1,292,889	+		PFLU_RS05730	0.59	-0.3
1,292,889	+		PFLU_RS05730	0.59	-1.3
1,292,889	+		PFLU_RS05730	0.59	+2.7
1,292,889	+		PFLU_RS05730	0.59	+1.1
1,292,889	+		PFLU_RS05730	0.59	-0.5
1,292,889	+		PFLU_RS05730	0.59	+0.5
1,292,889	+		PFLU_RS05730	0.59	+0.7
1,292,889	+		PFLU_RS05730	0.59	+2.0
1,292,890	-		PFLU_RS05730	0.59	+0.2
1,292,890	-		PFLU_RS05730	0.59	-0.3
1,292,890	-		PFLU_RS05730	0.59	+2.5
1,292,890	-		PFLU_RS05730	0.59	+0.5
1,292,890	-		PFLU_RS05730	0.59	-1.2
1,292,890	-		PFLU_RS05730	0.59	+0.1
1,292,917	+		PFLU_RS05730	0.63	-1.6
1,292,951	+		PFLU_RS05730	0.69	-0.5
1,292,952	-		PFLU_RS05730	0.69	+0.5
1,292,986	+		PFLU_RS05730	0.74	+0.1
1,292,986	+		PFLU_RS05730	0.74	-1.8
1,292,986	+		PFLU_RS05730	0.74	+1.7
1,292,986	+		PFLU_RS05730	0.74	-0.8
1,292,986	+		PFLU_RS05730	0.74	+2.3
1,292,987	-		PFLU_RS05730	0.74	+0.7
1,292,987	-		PFLU_RS05730	0.74	+0.3
1,292,987	-		PFLU_RS05730	0.74	-0.0
1,293,066	+		PFLU_RS05730	0.87	+0.1
1,293,066	+		PFLU_RS05730	0.87	-0.2
1,293,066	+		PFLU_RS05730	0.87	-0.9
1,293,066	+		PFLU_RS05730	0.87	+0.8
1,293,066	+		PFLU_RS05730	0.87	+0.3
1,293,066	+		PFLU_RS05730	0.87	-1.9
1,293,066	+		PFLU_RS05730	0.87	+0.8
1,293,066	+		PFLU_RS05730	0.87	-0.9
1,293,066	+		PFLU_RS05730	0.87	+0.7
1,293,066	+		PFLU_RS05730	0.87	+0.6
1,293,066	+		PFLU_RS05730	0.87	+0.7
1,293,066	+		PFLU_RS05730	0.87	+0.3
1,293,066	+		PFLU_RS05730	0.87	-1.1
1,293,066	+		PFLU_RS05730	0.87	-1.7
1,293,066	+		PFLU_RS05730	0.87	-1.7
1,293,066	+		PFLU_RS05730	0.87	-1.7
1,293,067	-		PFLU_RS05730	0.87	-2.7
1,293,067	-		PFLU_RS05730	0.87	+1.2
1,293,067	-		PFLU_RS05730	0.87	-1.5
1,293,067	-		PFLU_RS05730	0.87	+1.1
1,293,067	-		PFLU_RS05730	0.87	-2.4
1,293,067	-		PFLU_RS05730	0.87	-0.6
1,293,067	-		PFLU_RS05730	0.87	+1.7
1,293,067	-		PFLU_RS05730	0.87	+2.0
1,293,067	-		PFLU_RS05730	0.87	-2.0
1,293,067	-		PFLU_RS05730	0.87	+2.5
1,293,067	-		PFLU_RS05730	0.87	+3.1
1,293,067	-		PFLU_RS05730	0.87	-0.3
1,293,134	+				+4.4
1,293,145	+				+1.2
1,293,145	+				-0.2
1,293,145	+				+2.3
1,293,145	+				-1.3
1,293,145	+				-0.3
1,293,146	-				+2.6
1,293,146	-				+1.0
1,293,146	-				-0.7
1,293,146	-				+0.2
1,293,147	+				-1.3
1,293,147	+				-3.1
1,293,147	+				+3.1
1,293,147	+				+0.5
1,293,147	+				+5.3
1,293,147	+				-1.5
1,293,147	+				+2.3
1,293,147	+				-0.4
1,293,147	+				+1.2
1,293,148	-				-0.3
1,293,148	-				+2.8
1,293,148	-				-0.2
1,293,148	-				+0.2
1,293,148	-				-1.8
1,293,148	-				-0.5
1,293,250	+				+3.4
1,293,251	-				-0.3
1,293,251	-				-0.5
1,293,416	+				+1.7
1,293,416	+				-1.2
1,293,416	+				+1.1
1,293,416	+				+1.6
1,293,416	+				+1.7
1,293,417	-				+0.6
1,293,417	-				+0.3
1,293,417	-				+0.6
1,293,417	-				+1.9
1,293,433	+				-0.7
1,293,434	-				+1.5
1,293,455	+				-2.0
1,293,455	+				-2.1
1,293,456	-				-0.4
1,293,456	-				+0.4
1,293,456	-				+1.5
1,293,456	-				+1.1
1,293,456	-				-0.2
1,293,456	-				-0.0
1,293,456	-				+0.1
1,293,456	-				+0.2
1,293,456	-				-2.3
1,293,456	-				+3.4
1,293,457	+				+0.7
1,293,457	+				-0.1
1,293,457	+				+0.2
1,293,457	+				+0.8
1,293,457	+				+1.1
1,293,458	-				-1.5
1,293,463	+				-1.7
1,293,549	+				+1.6
1,293,549	+				+1.1
1,293,549	+				-1.2
1,293,549	+				+3.1
1,293,549	+				-1.3
1,293,550	-				-1.1
1,293,550	-				+0.6
1,293,550	-				+0.9
1,293,550	-				-0.3
1,293,550	-				-0.9
1,293,566	+				+0.2
1,293,567	-				+2.6
1,293,609	+		PFLU_RS05740	0.13	+1.2
1,293,609	+		PFLU_RS05740	0.13	+1.5
1,293,609	+		PFLU_RS05740	0.13	+1.2
1,293,609	+		PFLU_RS05740	0.13	+0.4
1,293,609	+		PFLU_RS05740	0.13	+1.5
1,293,609	+		PFLU_RS05740	0.13	+2.6
1,293,609	+		PFLU_RS05740	0.13	+0.3
1,293,610	-		PFLU_RS05740	0.13	-1.5
1,293,610	-		PFLU_RS05740	0.13	-2.4
1,293,610	-		PFLU_RS05740	0.13	+1.3
1,293,610	-		PFLU_RS05740	0.13	-0.7
1,293,610	-		PFLU_RS05740	0.13	-1.2
1,293,651	+		PFLU_RS05740	0.20	+3.2
1,293,651	+		PFLU_RS05740	0.20	+4.0
1,293,651	+		PFLU_RS05740	0.20	-0.2
1,293,652	-		PFLU_RS05740	0.20	+1.9
1,293,652	-		PFLU_RS05740	0.20	+1.9
1,293,727	+		PFLU_RS05740	0.32	+1.1
1,293,805	+		PFLU_RS05740	0.44	-0.4
1,293,806	-		PFLU_RS05740	0.44	-1.8
1,293,806	-		PFLU_RS05740	0.44	+1.2
1,293,918	+		PFLU_RS05740	0.62	-0.9
1,293,918	+		PFLU_RS05740	0.62	-0.4
1,293,918	+		PFLU_RS05740	0.62	-1.7
1,293,918	+		PFLU_RS05740	0.62	+1.1
1,293,918	+		PFLU_RS05740	0.62	+0.7
1,293,918	+		PFLU_RS05740	0.62	+0.8
1,293,918	+		PFLU_RS05740	0.62	+3.2
1,293,918	+		PFLU_RS05740	0.62	-0.4
1,293,919	-		PFLU_RS05740	0.62	+2.2
1,293,939	+		PFLU_RS05740	0.65	-0.5
1,293,939	+		PFLU_RS05740	0.65	-0.7
1,293,939	+		PFLU_RS05740	0.65	-1.5
1,293,939	+		PFLU_RS05740	0.65	+2.6
1,293,939	+		PFLU_RS05740	0.65	+0.9
1,293,939	+		PFLU_RS05740	0.65	-0.2
1,293,940	-		PFLU_RS05740	0.65	+0.6
1,293,940	-		PFLU_RS05740	0.65	-1.8
1,293,969	+		PFLU_RS05740	0.70	+2.0
1,293,969	+		PFLU_RS05740	0.70	-0.5
1,293,969	+		PFLU_RS05740	0.70	-1.8
1,293,969	+		PFLU_RS05740	0.70	-0.4
1,293,969	+		PFLU_RS05740	0.70	-0.9
1,293,969	+		PFLU_RS05740	0.70	+3.3
1,293,969	+		PFLU_RS05740	0.70	-1.5
1,293,969	+		PFLU_RS05740	0.70	-1.4
1,293,969	+		PFLU_RS05740	0.70	+3.4
1,293,969	+		PFLU_RS05740	0.70	+3.6
1,293,969	+		PFLU_RS05740	0.70	-1.1
1,293,969	+		PFLU_RS05740	0.70	+3.3
1,293,969	+		PFLU_RS05740	0.70	+1.4
1,293,970	-		PFLU_RS05740	0.70	+2.0
1,293,970	-		PFLU_RS05740	0.70	+3.5
1,293,970	-		PFLU_RS05740	0.70	+1.0
1,293,970	-		PFLU_RS05740	0.70	+1.6
1,293,970	-		PFLU_RS05740	0.70	+2.3
1,293,970	-		PFLU_RS05740	0.70	-2.1
1,293,970	-		PFLU_RS05740	0.70	+1.7
1,293,970	-		PFLU_RS05740	0.70	+4.6
1,293,970	-		PFLU_RS05740	0.70	-1.8
1,293,970	-		PFLU_RS05740	0.70	+0.6
1,293,970	-		PFLU_RS05740	0.70	-0.2
1,293,970	-		PFLU_RS05740	0.70	+2.4
1,293,970	-		PFLU_RS05740	0.70	+2.2
1,293,970	-		PFLU_RS05740	0.70	+0.8
1,293,970	-		PFLU_RS05740	0.70	-1.4
1,293,970	-		PFLU_RS05740	0.70	+1.2
1,293,999	+		PFLU_RS05740	0.74	-0.0
1,294,086	+		PFLU_RS05740	0.88	-0.5
1,294,086	+		PFLU_RS05740	0.88	-1.2
1,294,086	+		PFLU_RS05740	0.88	+0.6
1,294,086	+		PFLU_RS05740	0.88	+1.1
1,294,086	+		PFLU_RS05740	0.88	-1.8
1,294,086	+		PFLU_RS05740	0.88	+0.9
1,294,087	-		PFLU_RS05740	0.88	-2.0
1,294,087	-		PFLU_RS05740	0.88	+1.1
1,294,087	-		PFLU_RS05740	0.88	-1.8
1,294,087	-		PFLU_RS05740	0.88	-1.5
1,294,087	-		PFLU_RS05740	0.88	+0.6
1,294,237	+				-0.6
1,294,238	-				+3.1
1,294,238	-				-1.8
1,294,251	+				-0.4
1,294,252	-				+0.1
1,294,303	+				+0.3
1,294,303	+				+0.9
1,294,304	-				-1.2
1,294,304	-				+0.8
1,294,304	-				+2.3
1,294,368	+				-1.1
1,294,368	+				+0.1
1,294,368	+				-1.9
1,294,369	-				+1.1
1,294,386	+				-2.5
1,294,386	+				+1.3
1,294,386	+				-2.0
1,294,386	+				-2.6
1,294,386	+				-0.2
1,294,386	+				+2.2
1,294,386	+				-1.3
1,294,386	+				+2.3
1,294,387	-				+0.6
1,294,387	-				-0.3
1,294,387	-				-1.7
1,294,387	-				-2.3
1,294,412	-		PFLU_RS05745	0.10	-0.9