Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05025

Experiment: L-Valine (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (C)
1,122,473	-		PFLU_RS05015	0.60	+4.3
1,122,473	-		PFLU_RS05015	0.60	-1.3
1,122,728	+				+1.4
1,122,729	-				-0.9
1,122,742	+				-1.3
1,122,777	+				-0.5
1,122,784	+				-2.3
1,122,785	-				+1.7
1,122,785	-				-1.0
1,122,785	-				+2.1
1,122,785	-				-1.7
1,122,785	-				-0.6
1,122,794	+				+0.3
1,122,794	+				-1.3
1,122,794	+				-2.9
1,122,794	+				-2.7
1,122,795	-				-0.8
1,122,800	+				-0.8
1,122,966	-		PFLU_RS05020	0.28	-1.9
1,123,112	+		PFLU_RS05020	0.51	-0.1
1,123,113	-		PFLU_RS05020	0.51	+2.7
1,123,393	+				+2.4
1,123,413	+				+4.4
1,123,413	+				-2.4
1,123,413	+				+0.5
1,123,413	+				+0.9
1,123,413	+				-2.8
1,123,413	+				+0.7
1,123,413	+				+0.2
1,123,413	+				+1.7
1,123,413	+				+0.8
1,123,413	+				+0.1
1,123,414	-				+0.7
1,123,414	-				-2.4
1,123,414	-				+0.5
1,123,414	-				+2.3
1,123,414	-				-2.0
1,123,414	-				-1.1
1,123,430	+				-0.3
1,123,431	-				+0.6
1,123,431	-				+2.3
1,123,431	-				-0.5
1,123,465	+				+1.6
1,123,472	-				-2.2
1,123,552	+		PFLU_RS05025	0.14	+0.7
1,123,552	+		PFLU_RS05025	0.14	+3.1
1,123,552	+		PFLU_RS05025	0.14	-2.2
1,123,552	+		PFLU_RS05025	0.14	-1.7
1,123,552	+		PFLU_RS05025	0.14	+3.0
1,123,552	+		PFLU_RS05025	0.14	+1.8
1,123,552	+		PFLU_RS05025	0.14	-2.1
1,123,552	+		PFLU_RS05025	0.14	+1.6
1,123,553	-		PFLU_RS05025	0.14	-2.5
1,123,553	-		PFLU_RS05025	0.14	+2.7
1,123,553	-		PFLU_RS05025	0.14	-2.3
1,123,553	-		PFLU_RS05025	0.14	+1.7
1,123,553	-		PFLU_RS05025	0.14	-1.6
1,123,627	+		PFLU_RS05025	0.26	-2.3
1,123,627	+		PFLU_RS05025	0.26	+1.2
1,123,627	+		PFLU_RS05025	0.26	-1.0
1,123,627	+		PFLU_RS05025	0.26	-1.2
1,123,627	+		PFLU_RS05025	0.26	-0.4
1,123,627	+		PFLU_RS05025	0.26	+2.1
1,123,627	+		PFLU_RS05025	0.26	+1.3
1,123,627	+		PFLU_RS05025	0.26	-0.6
1,123,628	-		PFLU_RS05025	0.26	+2.6
1,123,628	-		PFLU_RS05025	0.26	+0.4
1,123,628	-		PFLU_RS05025	0.26	-0.6
1,123,628	-		PFLU_RS05025	0.26	+0.1
1,123,628	-		PFLU_RS05025	0.26	+1.9
1,123,628	-		PFLU_RS05025	0.26	-0.2
1,123,628	-		PFLU_RS05025	0.26	+0.3
1,123,628	-		PFLU_RS05025	0.26	-0.5
1,123,628	-		PFLU_RS05025	0.26	-0.4
1,123,687	+		PFLU_RS05025	0.36	-0.9
1,123,688	-		PFLU_RS05025	0.36	+0.6
1,123,688	-		PFLU_RS05025	0.36	+1.1
1,123,744	+		PFLU_RS05025	0.45	-0.4
1,123,744	+		PFLU_RS05025	0.45	+0.4
1,123,744	+		PFLU_RS05025	0.45	+1.6
1,123,745	-		PFLU_RS05025	0.45	+2.2
1,123,745	-		PFLU_RS05025	0.45	-1.0
1,124,147	+				-1.9
1,124,147	+				+0.7
1,124,148	-				-0.5
1,124,148	-				-0.6
1,124,148	-				+1.7
1,124,148	-				-1.4
1,124,148	-				+0.1
1,124,220	+		PFLU_RS05030	0.13	-0.8
1,124,220	+		PFLU_RS05030	0.13	-0.3
1,124,221	-		PFLU_RS05030	0.13	-1.2
1,124,221	-		PFLU_RS05030	0.13	+4.5
1,124,221	-		PFLU_RS05030	0.13	+1.7
1,124,222	+		PFLU_RS05030	0.13	+2.1
1,124,222	+		PFLU_RS05030	0.13	-1.8
1,124,222	+		PFLU_RS05030	0.13	-0.4
1,124,222	+		PFLU_RS05030	0.13	+0.1
1,124,222	+		PFLU_RS05030	0.13	-1.9
1,124,222	+		PFLU_RS05030	0.13	-0.6
1,124,222	+		PFLU_RS05030	0.13	+0.1
1,124,222	+		PFLU_RS05030	0.13	-0.9
1,124,222	+		PFLU_RS05030	0.13	+2.0
1,124,222	+		PFLU_RS05030	0.13	-1.7
1,124,222	+		PFLU_RS05030	0.13	-0.5
1,124,222	+		PFLU_RS05030	0.13	+0.3
1,124,222	+		PFLU_RS05030	0.13	+1.2
1,124,222	+		PFLU_RS05030	0.13	+1.1
1,124,222	+		PFLU_RS05030	0.13	+1.0
1,124,222	+		PFLU_RS05030	0.13	-0.5
1,124,222	+		PFLU_RS05030	0.13	-0.3
1,124,222	+		PFLU_RS05030	0.13	+0.5
1,124,222	+		PFLU_RS05030	0.13	+1.2
1,124,222	+		PFLU_RS05030	0.13	+0.7
1,124,222	+		PFLU_RS05030	0.13	+2.0
1,124,222	+		PFLU_RS05030	0.13	-2.5
1,124,222	+		PFLU_RS05030	0.13	+0.2
1,124,222	+		PFLU_RS05030	0.13	-0.5
1,124,222	+		PFLU_RS05030	0.13	-0.1
1,124,222	+		PFLU_RS05030	0.13	+2.2
1,124,222	+		PFLU_RS05030	0.13	+1.1
1,124,222	+		PFLU_RS05030	0.13	-2.9
1,124,222	+		PFLU_RS05030	0.13	+2.8
1,124,222	+		PFLU_RS05030	0.13	-1.3
1,124,222	+		PFLU_RS05030	0.13	-1.9
1,124,222	+		PFLU_RS05030	0.13	-1.1
1,124,222	+		PFLU_RS05030	0.13	+0.6
1,124,223	-		PFLU_RS05030	0.13	+1.1
1,124,223	-		PFLU_RS05030	0.13	-1.4
1,124,223	-		PFLU_RS05030	0.13	-1.2
1,124,223	-		PFLU_RS05030	0.13	-0.5
1,124,223	-		PFLU_RS05030	0.13	-1.7
1,124,223	-		PFLU_RS05030	0.13	-1.5
1,124,223	-		PFLU_RS05030	0.13	-1.5
1,124,223	-		PFLU_RS05030	0.13	+1.6
1,124,223	-		PFLU_RS05030	0.13	-1.0
1,124,223	-		PFLU_RS05030	0.13	+3.9
1,124,223	-		PFLU_RS05030	0.13	-1.2
1,124,223	-		PFLU_RS05030	0.13	+4.1
1,124,223	-		PFLU_RS05030	0.13	-1.2
1,124,223	-		PFLU_RS05030	0.13	-0.0
1,124,223	-		PFLU_RS05030	0.13	-1.5
1,124,223	-		PFLU_RS05030	0.13	-1.0
1,124,223	-		PFLU_RS05030	0.13	-1.5
1,124,223	-		PFLU_RS05030	0.13	+0.0
1,124,223	-		PFLU_RS05030	0.13	+2.6
1,124,223	-		PFLU_RS05030	0.13	+1.7
1,124,223	-		PFLU_RS05030	0.13	+0.9
1,124,223	-		PFLU_RS05030	0.13	+1.4
1,124,223	-		PFLU_RS05030	0.13	+2.2
1,124,223	-		PFLU_RS05030	0.13	-1.1
1,124,223	-		PFLU_RS05030	0.13	+4.7
1,124,223	-		PFLU_RS05030	0.13	-1.6
1,124,223	-		PFLU_RS05030	0.13	-2.3
1,124,223	-		PFLU_RS05030	0.13	-0.5
1,124,223	-		PFLU_RS05030	0.13	-1.5
1,124,223	-		PFLU_RS05030	0.13	-1.6
1,124,223	-		PFLU_RS05030	0.13	-1.4
1,124,223	-		PFLU_RS05030	0.13	+1.8
1,124,316	+		PFLU_RS05030	0.28	-2.6
1,124,316	+		PFLU_RS05030	0.28	-1.2
1,124,316	+		PFLU_RS05030	0.28	+2.4
1,124,316	+		PFLU_RS05030	0.28	-1.2
1,124,316	+		PFLU_RS05030	0.28	-0.2
1,124,316	+		PFLU_RS05030	0.28	-2.6
1,124,316	+		PFLU_RS05030	0.28	-2.0
1,124,316	+		PFLU_RS05030	0.28	+1.7
1,124,316	+		PFLU_RS05030	0.28	-1.4
1,124,316	+		PFLU_RS05030	0.28	+0.1
1,124,317	-		PFLU_RS05030	0.29	-1.4
1,124,317	-		PFLU_RS05030	0.29	-2.3
1,124,317	-		PFLU_RS05030	0.29	-1.3
1,124,317	-		PFLU_RS05030	0.29	+0.7
1,124,317	-		PFLU_RS05030	0.29	-2.6
1,124,317	-		PFLU_RS05030	0.29	+0.4
1,124,317	-		PFLU_RS05030	0.29	+1.0
1,124,317	-		PFLU_RS05030	0.29	+1.9
1,124,456	+		PFLU_RS05030	0.51	-0.9
1,124,456	+		PFLU_RS05030	0.51	+0.4
1,124,456	+		PFLU_RS05030	0.51	-2.0
1,124,456	+		PFLU_RS05030	0.51	-2.5
1,124,456	+		PFLU_RS05030	0.51	+2.5
1,124,456	+		PFLU_RS05030	0.51	+1.1
1,124,456	+		PFLU_RS05030	0.51	-0.1
1,124,456	+		PFLU_RS05030	0.51	-0.0
1,124,456	+		PFLU_RS05030	0.51	-1.5
1,124,456	+		PFLU_RS05030	0.51	+1.0
1,124,457	-		PFLU_RS05030	0.51	-1.9
1,124,457	-		PFLU_RS05030	0.51	-0.1
1,124,457	-		PFLU_RS05030	0.51	-1.8
1,124,457	-		PFLU_RS05030	0.51	-2.9
1,124,457	-		PFLU_RS05030	0.51	-1.9
1,124,457	-		PFLU_RS05030	0.51	-1.8
1,124,457	-		PFLU_RS05030	0.51	+1.7
1,124,457	-		PFLU_RS05030	0.51	+1.4
1,124,462	+		PFLU_RS05030	0.52	-1.2
1,124,462	+		PFLU_RS05030	0.52	+0.1
1,124,462	+		PFLU_RS05030	0.52	+4.7
1,124,463	-		PFLU_RS05030	0.52	+0.4
1,124,463	-		PFLU_RS05030	0.52	-2.6
1,124,463	-		PFLU_RS05030	0.52	+3.1
1,124,463	-		PFLU_RS05030	0.52	+2.1
1,124,463	-		PFLU_RS05030	0.52	-0.1
1,124,463	-		PFLU_RS05030	0.52	+1.5
1,124,463	-		PFLU_RS05030	0.52	-0.1
1,124,463	-		PFLU_RS05030	0.52	+0.9
1,124,463	-		PFLU_RS05030	0.52	+0.9
1,124,497	-		PFLU_RS05030	0.57	-2.8
1,124,564	+		PFLU_RS05030	0.68	-3.1
1,124,564	+		PFLU_RS05030	0.68	-0.7
1,124,564	+		PFLU_RS05030	0.68	-1.5
1,124,564	+		PFLU_RS05030	0.68	+3.1
1,124,564	+		PFLU_RS05030	0.68	-0.7
1,124,565	-		PFLU_RS05030	0.68	+3.6
1,124,565	-		PFLU_RS05030	0.68	-2.3
1,124,565	-		PFLU_RS05030	0.68	-0.9
1,124,565	-		PFLU_RS05030	0.68	-0.2
1,124,565	-		PFLU_RS05030	0.68	+1.6
1,124,565	-		PFLU_RS05030	0.68	-0.5
1,124,565	-		PFLU_RS05030	0.68	+1.0
1,124,749	+				-1.1
1,124,779	+				+0.9
1,124,800	+				+0.0
1,124,800	+				-1.9
1,124,801	-				-1.9
1,124,801	-				-1.4
1,124,801	-				+0.6
1,124,801	-				-0.6
1,124,801	-				-1.4
1,124,801	-				-2.7
1,124,806	+				+2.7
1,124,807	-				-1.5
1,124,807	-				-0.9
1,124,807	-				-2.1
1,124,980	+		PFLU_RS05035	0.29	+2.3
1,124,980	+		PFLU_RS05035	0.29	-0.3
1,124,980	+		PFLU_RS05035	0.29	+1.5
1,124,980	+		PFLU_RS05035	0.29	+1.2
1,124,980	+		PFLU_RS05035	0.29	-2.2
1,124,980	+		PFLU_RS05035	0.29	+0.9
1,124,980	+		PFLU_RS05035	0.29	-0.9
1,124,980	+		PFLU_RS05035	0.29	-1.6
1,124,980	+		PFLU_RS05035	0.29	-0.5
1,124,980	+		PFLU_RS05035	0.29	+2.2
1,124,980	+		PFLU_RS05035	0.29	-2.3
1,124,980	+		PFLU_RS05035	0.29	-1.7
1,124,981	-		PFLU_RS05035	0.29	+0.5
1,124,981	-		PFLU_RS05035	0.29	+1.6
1,124,981	-		PFLU_RS05035	0.29	-0.1
1,124,981	-		PFLU_RS05035	0.29	-0.1
1,124,981	-		PFLU_RS05035	0.29	-0.1
1,124,981	-		PFLU_RS05035	0.29	+4.3
1,124,981	-		PFLU_RS05035	0.29	-1.1
1,124,981	-		PFLU_RS05035	0.29	-2.1
1,124,981	-		PFLU_RS05035	0.29	+0.1
1,124,981	-		PFLU_RS05035	0.29	-1.2
1,124,981	-		PFLU_RS05035	0.29	-1.3
1,124,981	-		PFLU_RS05035	0.29	-0.8
1,124,981	-		PFLU_RS05035	0.29	+0.5
1,124,981	-		PFLU_RS05035	0.29	+1.5
1,124,981	-		PFLU_RS05035	0.29	+1.8
1,124,981	-		PFLU_RS05035	0.29	+1.3
1,124,981	-		PFLU_RS05035	0.29	+1.1
1,125,015	-		PFLU_RS05035	0.35	+0.9
1,125,015	-		PFLU_RS05035	0.35	-1.5
1,125,056	+		PFLU_RS05035	0.41	+2.1
1,125,056	+		PFLU_RS05035	0.41	+0.3
1,125,057	-		PFLU_RS05035	0.41	-1.4
1,125,057	-		PFLU_RS05035	0.41	-2.2
1,125,057	-		PFLU_RS05035	0.41	-0.9