Experiment: L-Valine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS00665 and PFLU_RS00670 are separated by 15 nucleotides PFLU_RS00670 and PFLU_RS00675 overlap by 4 nucleotides
PFLU_RS00665: PFLU_RS00665 - MFS transporter, at 140,045 to 141,580
_RS00665
PFLU_RS00670: PFLU_RS00670 - HlyD family secretion protein, at 141,596 to 142,654
_RS00670
PFLU_RS00675: PFLU_RS00675 - efflux transporter outer membrane subunit, at 142,651 to 144,096
_RS00675
Position (kb) 141
142
143 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 140.826 kb on + strand, within PFLU_RS00665 at 140.826 kb on + strand, within PFLU_RS00665 at 140.826 kb on + strand, within PFLU_RS00665 at 140.826 kb on + strand, within PFLU_RS00665 at 140.827 kb on - strand, within PFLU_RS00665 at 140.827 kb on - strand, within PFLU_RS00665 at 140.827 kb on - strand, within PFLU_RS00665 at 141.188 kb on + strand, within PFLU_RS00665 at 141.188 kb on + strand, within PFLU_RS00665 at 141.188 kb on + strand, within PFLU_RS00665 at 141.188 kb on + strand, within PFLU_RS00665 at 141.189 kb on - strand, within PFLU_RS00665 at 141.189 kb on - strand, within PFLU_RS00665 at 141.189 kb on - strand, within PFLU_RS00665 at 141.197 kb on + strand, within PFLU_RS00665 at 141.197 kb on + strand, within PFLU_RS00665 at 141.198 kb on - strand, within PFLU_RS00665 at 141.198 kb on - strand, within PFLU_RS00665 at 141.198 kb on - strand, within PFLU_RS00665 at 141.198 kb on - strand, within PFLU_RS00665 at 141.198 kb on - strand, within PFLU_RS00665 at 141.198 kb on - strand, within PFLU_RS00665 at 141.204 kb on + strand, within PFLU_RS00665 at 141.310 kb on + strand, within PFLU_RS00665 at 141.310 kb on + strand, within PFLU_RS00665 at 141.311 kb on - strand, within PFLU_RS00665 at 141.311 kb on - strand, within PFLU_RS00665 at 141.491 kb on + strand at 141.491 kb on + strand at 141.491 kb on + strand at 141.491 kb on + strand at 141.492 kb on - strand at 141.492 kb on - strand at 141.492 kb on - strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.494 kb on + strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.495 kb on - strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.659 kb on + strand at 141.660 kb on - strand at 141.660 kb on - strand at 141.660 kb on - strand at 141.660 kb on - strand at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.868 kb on + strand, within PFLU_RS00670 at 141.869 kb on - strand, within PFLU_RS00670 at 141.869 kb on - strand, within PFLU_RS00670 at 141.869 kb on - strand, within PFLU_RS00670 at 141.869 kb on - strand, within PFLU_RS00670 at 142.004 kb on + strand, within PFLU_RS00670 at 142.005 kb on - strand, within PFLU_RS00670 at 142.005 kb on - strand, within PFLU_RS00670 at 142.005 kb on - strand, within PFLU_RS00670 at 142.005 kb on - strand, within PFLU_RS00670 at 142.208 kb on + strand, within PFLU_RS00670 at 142.208 kb on + strand, within PFLU_RS00670 at 142.208 kb on + strand, within PFLU_RS00670 at 142.209 kb on - strand, within PFLU_RS00670 at 142.209 kb on - strand, within PFLU_RS00670 at 142.209 kb on - strand, within PFLU_RS00670 at 142.209 kb on - strand, within PFLU_RS00670 at 142.220 kb on + strand, within PFLU_RS00670 at 142.220 kb on + strand, within PFLU_RS00670 at 142.220 kb on + strand, within PFLU_RS00670 at 142.220 kb on + strand, within PFLU_RS00670 at 142.220 kb on + strand, within PFLU_RS00670 at 142.221 kb on - strand, within PFLU_RS00670 at 142.221 kb on - strand, within PFLU_RS00670 at 142.221 kb on - strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.283 kb on + strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.284 kb on - strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.305 kb on + strand, within PFLU_RS00670 at 142.306 kb on - strand, within PFLU_RS00670 at 142.306 kb on - strand, within PFLU_RS00670 at 142.334 kb on + strand, within PFLU_RS00670 at 142.334 kb on + strand, within PFLU_RS00670 at 142.334 kb on + strand, within PFLU_RS00670 at 142.334 kb on + strand, within PFLU_RS00670 at 142.334 kb on + strand, within PFLU_RS00670 at 142.334 kb on + strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.335 kb on - strand, within PFLU_RS00670 at 142.373 kb on - strand, within PFLU_RS00670 at 142.684 kb on - strand at 142.975 kb on + strand, within PFLU_RS00675 at 142.975 kb on + strand, within PFLU_RS00675 at 142.975 kb on + strand, within PFLU_RS00675 at 142.975 kb on + strand, within PFLU_RS00675 at 142.975 kb on + strand, within PFLU_RS00675 at 142.976 kb on - strand, within PFLU_RS00675 at 142.976 kb on - strand, within PFLU_RS00675 at 143.006 kb on + strand, within PFLU_RS00675 at 143.007 kb on - strand, within PFLU_RS00675 at 143.007 kb on - strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.197 kb on + strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.198 kb on - strand, within PFLU_RS00675 at 143.216 kb on + strand, within PFLU_RS00675 at 143.216 kb on + strand, within PFLU_RS00675 at 143.216 kb on + strand, within PFLU_RS00675 at 143.217 kb on - strand, within PFLU_RS00675 at 143.217 kb on - strand, within PFLU_RS00675 at 143.217 kb on - strand, within PFLU_RS00675 at 143.415 kb on - strand, within PFLU_RS00675 at 143.415 kb on - strand, within PFLU_RS00675 at 143.599 kb on + strand, within PFLU_RS00675 at 143.600 kb on - strand, within PFLU_RS00675
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (C) remove 140,826 + PFLU_RS00665 0.51 +0.8 140,826 + PFLU_RS00665 0.51 +0.8 140,826 + PFLU_RS00665 0.51 +1.7 140,826 + PFLU_RS00665 0.51 +0.3 140,827 - PFLU_RS00665 0.51 -0.2 140,827 - PFLU_RS00665 0.51 +1.6 140,827 - PFLU_RS00665 0.51 -1.1 141,188 + PFLU_RS00665 0.74 +1.1 141,188 + PFLU_RS00665 0.74 +2.2 141,188 + PFLU_RS00665 0.74 -1.8 141,188 + PFLU_RS00665 0.74 +0.4 141,189 - PFLU_RS00665 0.74 -0.9 141,189 - PFLU_RS00665 0.74 +0.9 141,189 - PFLU_RS00665 0.74 +1.1 141,197 + PFLU_RS00665 0.75 +0.8 141,197 + PFLU_RS00665 0.75 -0.4 141,198 - PFLU_RS00665 0.75 +1.5 141,198 - PFLU_RS00665 0.75 +0.1 141,198 - PFLU_RS00665 0.75 +1.3 141,198 - PFLU_RS00665 0.75 -1.6 141,198 - PFLU_RS00665 0.75 +0.3 141,198 - PFLU_RS00665 0.75 -1.8 141,204 + PFLU_RS00665 0.75 -1.8 141,310 + PFLU_RS00665 0.82 +0.6 141,310 + PFLU_RS00665 0.82 +1.3 141,311 - PFLU_RS00665 0.82 -0.6 141,311 - PFLU_RS00665 0.82 -2.7 141,491 + +0.3 141,491 + -2.0 141,491 + +0.2 141,491 + +0.1 141,492 - +1.2 141,492 - -0.8 141,492 - -0.6 141,494 + +1.2 141,494 + +1.1 141,494 + +0.4 141,494 + +0.3 141,494 + -2.7 141,494 + +2.8 141,494 + -0.1 141,494 + +1.5 141,494 + -2.3 141,494 + +0.7 141,494 + -1.2 141,494 + +3.4 141,494 + -2.4 141,495 - +2.0 141,495 - +0.1 141,495 - -2.2 141,495 - -2.3 141,495 - -1.4 141,495 - +2.6 141,495 - -0.3 141,495 - -1.9 141,495 - +0.0 141,495 - -1.6 141,659 + +2.0 141,659 + -0.7 141,659 + +2.3 141,659 + +0.9 141,659 + +2.1 141,659 + -0.5 141,659 + -2.4 141,659 + -1.1 141,660 - -1.4 141,660 - -0.6 141,660 - +0.3 141,660 - +0.1 141,868 + PFLU_RS00670 0.26 -1.3 141,868 + PFLU_RS00670 0.26 -1.8 141,868 + PFLU_RS00670 0.26 -1.3 141,868 + PFLU_RS00670 0.26 +0.1 141,868 + PFLU_RS00670 0.26 -0.7 141,868 + PFLU_RS00670 0.26 -0.0 141,868 + PFLU_RS00670 0.26 -2.1 141,868 + PFLU_RS00670 0.26 -2.4 141,869 - PFLU_RS00670 0.26 -2.3 141,869 - PFLU_RS00670 0.26 +0.5 141,869 - PFLU_RS00670 0.26 -1.2 141,869 - PFLU_RS00670 0.26 -1.9 142,004 + PFLU_RS00670 0.39 -1.6 142,005 - PFLU_RS00670 0.39 -0.4 142,005 - PFLU_RS00670 0.39 -1.6 142,005 - PFLU_RS00670 0.39 +2.2 142,005 - PFLU_RS00670 0.39 +0.0 142,208 + PFLU_RS00670 0.58 +0.1 142,208 + PFLU_RS00670 0.58 +1.5 142,208 + PFLU_RS00670 0.58 +2.6 142,209 - PFLU_RS00670 0.58 +0.5 142,209 - PFLU_RS00670 0.58 -1.0 142,209 - PFLU_RS00670 0.58 +0.1 142,209 - PFLU_RS00670 0.58 -0.8 142,220 + PFLU_RS00670 0.59 +1.9 142,220 + PFLU_RS00670 0.59 +2.1 142,220 + PFLU_RS00670 0.59 +0.3 142,220 + PFLU_RS00670 0.59 -1.9 142,220 + PFLU_RS00670 0.59 -2.0 142,221 - PFLU_RS00670 0.59 -0.1 142,221 - PFLU_RS00670 0.59 -1.4 142,221 - PFLU_RS00670 0.59 +0.7 142,283 + PFLU_RS00670 0.65 +0.3 142,283 + PFLU_RS00670 0.65 -0.1 142,283 + PFLU_RS00670 0.65 -0.9 142,283 + PFLU_RS00670 0.65 +2.2 142,283 + PFLU_RS00670 0.65 -2.6 142,283 + PFLU_RS00670 0.65 -1.7 142,283 + PFLU_RS00670 0.65 -2.7 142,283 + PFLU_RS00670 0.65 +0.9 142,283 + PFLU_RS00670 0.65 -1.5 142,284 - PFLU_RS00670 0.65 -0.1 142,284 - PFLU_RS00670 0.65 -0.7 142,284 - PFLU_RS00670 0.65 +2.0 142,284 - PFLU_RS00670 0.65 -0.3 142,284 - PFLU_RS00670 0.65 -0.6 142,284 - PFLU_RS00670 0.65 +0.6 142,284 - PFLU_RS00670 0.65 -1.6 142,284 - PFLU_RS00670 0.65 -2.1 142,284 - PFLU_RS00670 0.65 -0.1 142,305 + PFLU_RS00670 0.67 +1.5 142,305 + PFLU_RS00670 0.67 -0.2 142,305 + PFLU_RS00670 0.67 +1.7 142,305 + PFLU_RS00670 0.67 +1.9 142,305 + PFLU_RS00670 0.67 +1.3 142,305 + PFLU_RS00670 0.67 -0.1 142,305 + PFLU_RS00670 0.67 -1.5 142,306 - PFLU_RS00670 0.67 -0.9 142,306 - PFLU_RS00670 0.67 +1.2 142,334 + PFLU_RS00670 0.70 -3.2 142,334 + PFLU_RS00670 0.70 +0.8 142,334 + PFLU_RS00670 0.70 -1.7 142,334 + PFLU_RS00670 0.70 +0.7 142,334 + PFLU_RS00670 0.70 +2.1 142,334 + PFLU_RS00670 0.70 +1.5 142,335 - PFLU_RS00670 0.70 +1.1 142,335 - PFLU_RS00670 0.70 -1.1 142,335 - PFLU_RS00670 0.70 +0.5 142,335 - PFLU_RS00670 0.70 -1.2 142,335 - PFLU_RS00670 0.70 -2.3 142,335 - PFLU_RS00670 0.70 +2.0 142,335 - PFLU_RS00670 0.70 -1.9 142,335 - PFLU_RS00670 0.70 -0.9 142,373 - PFLU_RS00670 0.73 +1.7 142,684 - -1.4 142,975 + PFLU_RS00675 0.22 -1.4 142,975 + PFLU_RS00675 0.22 -2.2 142,975 + PFLU_RS00675 0.22 +2.5 142,975 + PFLU_RS00675 0.22 +0.2 142,975 + PFLU_RS00675 0.22 -0.8 142,976 - PFLU_RS00675 0.22 +0.1 142,976 - PFLU_RS00675 0.22 +0.6 143,006 + PFLU_RS00675 0.25 -0.5 143,007 - PFLU_RS00675 0.25 +0.1 143,007 - PFLU_RS00675 0.25 -1.4 143,197 + PFLU_RS00675 0.38 -2.4 143,197 + PFLU_RS00675 0.38 -0.5 143,197 + PFLU_RS00675 0.38 +1.8 143,197 + PFLU_RS00675 0.38 +2.4 143,197 + PFLU_RS00675 0.38 +4.0 143,197 + PFLU_RS00675 0.38 -2.0 143,197 + PFLU_RS00675 0.38 +0.0 143,197 + PFLU_RS00675 0.38 +1.6 143,197 + PFLU_RS00675 0.38 -1.4 143,197 + PFLU_RS00675 0.38 -1.4 143,197 + PFLU_RS00675 0.38 -1.6 143,197 + PFLU_RS00675 0.38 -1.6 143,198 - PFLU_RS00675 0.38 +0.6 143,198 - PFLU_RS00675 0.38 -2.5 143,198 - PFLU_RS00675 0.38 -0.8 143,198 - PFLU_RS00675 0.38 -1.0 143,198 - PFLU_RS00675 0.38 -1.3 143,198 - PFLU_RS00675 0.38 -1.1 143,198 - PFLU_RS00675 0.38 -1.5 143,198 - PFLU_RS00675 0.38 -0.1 143,198 - PFLU_RS00675 0.38 -1.6 143,216 + PFLU_RS00675 0.39 -2.2 143,216 + PFLU_RS00675 0.39 +1.1 143,216 + PFLU_RS00675 0.39 +2.2 143,217 - PFLU_RS00675 0.39 -1.1 143,217 - PFLU_RS00675 0.39 +2.6 143,217 - PFLU_RS00675 0.39 -1.2 143,415 - PFLU_RS00675 0.53 +0.0 143,415 - PFLU_RS00675 0.53 +1.1 143,599 + PFLU_RS00675 0.66 -0.8 143,600 - PFLU_RS00675 0.66 +1.1
Or see this region's nucleotide sequence