Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22780

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
5,126,432	+		PFLU_RS22770	0.66	-0.7
5,126,432	+		PFLU_RS22770	0.66	+0.3
5,126,432	+		PFLU_RS22770	0.66	-1.1
5,126,432	+		PFLU_RS22770	0.66	+1.2
5,126,432	+		PFLU_RS22770	0.66	+3.4
5,126,433	-		PFLU_RS22770	0.66	-0.4
5,126,433	-		PFLU_RS22770	0.66	+0.4
5,126,433	-		PFLU_RS22770	0.66	+2.0
5,126,433	-		PFLU_RS22770	0.66	+1.9
5,126,450	+		PFLU_RS22770	0.70	-0.0
5,126,450	+		PFLU_RS22770	0.70	+0.7
5,126,450	+		PFLU_RS22770	0.70	+1.1
5,126,450	+		PFLU_RS22770	0.70	+0.1
5,126,451	-		PFLU_RS22770	0.71	+2.8
5,126,451	-		PFLU_RS22770	0.71	-1.6
5,126,522	+				+1.6
5,126,522	+				+4.0
5,126,522	+				-2.3
5,126,522	+				+0.5
5,126,522	+				+0.7
5,126,522	+				-2.2
5,126,522	+				-0.4
5,126,522	+				-0.0
5,126,522	+				+0.7
5,126,522	+				+1.3
5,126,523	-				+1.4
5,126,523	-				+1.3
5,126,756	+		PFLU_RS22775	0.25	-0.8
5,126,756	+		PFLU_RS22775	0.25	+0.8
5,126,757	-		PFLU_RS22775	0.25	-0.8
5,126,757	-		PFLU_RS22775	0.25	+0.8
5,126,843	+		PFLU_RS22775	0.40	-0.0
5,126,843	+		PFLU_RS22775	0.40	+1.5
5,126,843	+		PFLU_RS22775	0.40	+1.8
5,126,844	-		PFLU_RS22775	0.40	+1.4
5,126,844	-		PFLU_RS22775	0.40	-1.2
5,126,844	-		PFLU_RS22775	0.40	-1.1
5,126,844	-		PFLU_RS22775	0.40	+0.2
5,126,844	-		PFLU_RS22775	0.40	-2.5
5,126,844	-		PFLU_RS22775	0.40	+0.3
5,126,844	-		PFLU_RS22775	0.40	-1.0
5,126,844	-		PFLU_RS22775	0.40	+1.9
5,126,846	+		PFLU_RS22775	0.40	-0.5
5,126,846	+		PFLU_RS22775	0.40	+0.3
5,126,846	+		PFLU_RS22775	0.40	+0.6
5,126,847	-		PFLU_RS22775	0.41	+0.2
5,126,893	+		PFLU_RS22775	0.49	-3.0
5,126,893	+		PFLU_RS22775	0.49	+0.6
5,126,893	+		PFLU_RS22775	0.49	-1.3
5,126,893	+		PFLU_RS22775	0.49	+0.5
5,126,894	-		PFLU_RS22775	0.49	+0.6
5,126,918	+		PFLU_RS22775	0.53	-0.7
5,126,918	+		PFLU_RS22775	0.53	+0.1
5,126,918	+		PFLU_RS22775	0.53	-1.0
5,126,918	+		PFLU_RS22775	0.53	-1.2
5,126,918	+		PFLU_RS22775	0.53	-0.3
5,126,918	+		PFLU_RS22775	0.53	-1.5
5,126,918	+		PFLU_RS22775	0.53	-0.9
5,126,918	+		PFLU_RS22775	0.53	-0.0
5,126,918	+		PFLU_RS22775	0.53	-2.4
5,126,918	+		PFLU_RS22775	0.53	-2.4
5,126,918	+		PFLU_RS22775	0.53	-0.7
5,126,918	+		PFLU_RS22775	0.53	-2.2
5,126,919	-		PFLU_RS22775	0.53	+3.4
5,126,919	-		PFLU_RS22775	0.53	+0.9
5,126,919	-		PFLU_RS22775	0.53	-2.5
5,126,919	-		PFLU_RS22775	0.53	+1.6
5,126,919	-		PFLU_RS22775	0.53	+0.3
5,126,919	-		PFLU_RS22775	0.53	-0.9
5,126,919	-		PFLU_RS22775	0.53	-1.2
5,126,919	-		PFLU_RS22775	0.53	-1.0
5,126,919	-		PFLU_RS22775	0.53	+2.6
5,126,919	-		PFLU_RS22775	0.53	+1.5
5,126,919	-		PFLU_RS22775	0.53	-0.0
5,126,939	+		PFLU_RS22775	0.56	-1.4
5,126,939	+		PFLU_RS22775	0.56	-0.1
5,126,939	+		PFLU_RS22775	0.56	-1.3
5,126,939	+		PFLU_RS22775	0.56	+0.8
5,126,940	-		PFLU_RS22775	0.57	+0.6
5,127,094	+		PFLU_RS22775	0.83	-1.2
5,127,094	+		PFLU_RS22775	0.83	+0.1
5,127,094	+		PFLU_RS22775	0.83	+0.0
5,127,095	-		PFLU_RS22775	0.83	-1.4
5,127,095	-		PFLU_RS22775	0.83	-0.2
5,127,095	-		PFLU_RS22775	0.83	+0.6
5,127,095	-		PFLU_RS22775	0.83	+0.6
5,127,095	-		PFLU_RS22775	0.83	-1.3
5,127,134	+				-0.6
5,127,134	+				+0.4
5,127,134	+				-0.9
5,127,135	-				+1.8
5,127,135	-				+1.1
5,127,135	-				-1.0
5,127,166	+				+0.5
5,127,166	+				+1.3
5,127,167	-				-1.5
5,127,167	-				-0.8
5,127,167	-				+2.3
5,127,167	-				+0.8
5,127,167	-				-0.8
5,127,167	-				-1.2
5,127,167	-				+0.5
5,127,184	+				-1.2
5,127,184	+				-2.4
5,127,184	+				-0.9
5,127,185	-				+0.6
5,127,185	-				-1.0
5,127,185	-				+1.2
5,127,185	-				+2.3
5,127,185	-				-1.2
5,127,216	+				+1.9
5,127,217	-				+0.3
5,127,217	-				-1.0
5,127,217	-				+0.9
5,127,217	-				+2.3
5,127,253	+				+0.7
5,127,253	+				+1.2
5,127,253	+				+1.0
5,127,253	+				-0.7
5,127,253	+				+0.4
5,127,253	+				-1.8
5,127,253	+				+1.3
5,127,254	-				+0.9
5,127,254	-				-0.3
5,127,254	-				+0.4
5,127,254	-				+1.6
5,127,254	-				+1.1
5,127,254	-				+1.3
5,127,254	-				+0.5
5,127,254	-				-2.6
5,127,308	+				+1.0
5,127,308	+				+1.1
5,127,308	+				-1.3
5,127,308	+				+1.1
5,127,309	-				-0.7
5,127,314	+		PFLU_RS22780	0.11	+2.4
5,127,314	+		PFLU_RS22780	0.11	-1.4
5,127,314	+		PFLU_RS22780	0.11	-1.5
5,127,314	+		PFLU_RS22780	0.11	-2.7
5,127,314	+		PFLU_RS22780	0.11	-0.2
5,127,314	+		PFLU_RS22780	0.11	-1.1
5,127,314	+		PFLU_RS22780	0.11	-0.3
5,127,314	+		PFLU_RS22780	0.11	-1.4
5,127,315	-		PFLU_RS22780	0.11	+0.4
5,127,315	-		PFLU_RS22780	0.11	-1.0
5,127,315	-		PFLU_RS22780	0.11	-0.4
5,127,315	-		PFLU_RS22780	0.11	-1.0
5,127,328	-		PFLU_RS22780	0.15	-1.4
5,127,431	+		PFLU_RS22780	0.43	-0.2
5,127,432	-		PFLU_RS22780	0.43	+0.5
5,127,449	+		PFLU_RS22780	0.47	-0.7
5,127,464	+		PFLU_RS22780	0.51	-0.5
5,127,470	+		PFLU_RS22780	0.53	-2.5
5,127,470	+		PFLU_RS22780	0.53	-0.2
5,127,470	+		PFLU_RS22780	0.53	-1.5
5,127,470	+		PFLU_RS22780	0.53	+0.1
5,127,494	+		PFLU_RS22780	0.60	-0.3
5,127,494	+		PFLU_RS22780	0.60	+0.4
5,127,494	+		PFLU_RS22780	0.60	+1.0
5,127,494	+		PFLU_RS22780	0.60	-1.9
5,127,548	+		PFLU_RS22780	0.74	-1.1
5,127,548	+		PFLU_RS22780	0.74	+1.0
5,127,548	+		PFLU_RS22780	0.74	-1.0
5,127,548	+		PFLU_RS22780	0.74	-0.2
5,127,548	+		PFLU_RS22780	0.74	+1.8
5,127,548	+		PFLU_RS22780	0.74	+1.2
5,127,549	-		PFLU_RS22780	0.75	+0.6
5,127,549	-		PFLU_RS22780	0.75	-0.3
5,127,549	-		PFLU_RS22780	0.75	-0.6
5,127,549	-		PFLU_RS22780	0.75	-1.6
5,127,593	+		PFLU_RS22780	0.86	-2.0
5,127,593	+		PFLU_RS22780	0.86	-2.0
5,127,593	+		PFLU_RS22780	0.86	-0.6
5,127,593	+		PFLU_RS22780	0.86	+0.3
5,127,593	+		PFLU_RS22780	0.86	-2.3
5,127,593	+		PFLU_RS22780	0.86	+0.2
5,127,593	+		PFLU_RS22780	0.86	-0.0
5,127,593	+		PFLU_RS22780	0.86	-0.7
5,127,593	+		PFLU_RS22780	0.86	+2.2
5,127,593	+		PFLU_RS22780	0.86	+0.6
5,127,593	+		PFLU_RS22780	0.86	-1.6
5,127,593	+		PFLU_RS22780	0.86	+0.8
5,127,593	+		PFLU_RS22780	0.86	+0.8
5,127,593	+		PFLU_RS22780	0.86	-1.2
5,127,593	+		PFLU_RS22780	0.86	-0.1
5,127,593	+		PFLU_RS22780	0.86	+2.2
5,127,594	-		PFLU_RS22780	0.87	+0.8
5,127,594	-		PFLU_RS22780	0.87	-0.2
5,127,594	-		PFLU_RS22780	0.87	-0.4
5,127,594	-		PFLU_RS22780	0.87	-0.2
5,127,594	-		PFLU_RS22780	0.87	-2.0
5,127,594	-		PFLU_RS22780	0.87	-1.2
5,127,594	-		PFLU_RS22780	0.87	+0.7
5,127,594	-		PFLU_RS22780	0.87	-2.2
5,127,594	-		PFLU_RS22780	0.87	+1.8
5,127,594	-		PFLU_RS22780	0.87	-0.0
5,127,594	-		PFLU_RS22780	0.87	+0.5
5,127,594	-		PFLU_RS22780	0.87	+0.4
5,127,594	-		PFLU_RS22780	0.87	-0.2
5,127,594	-		PFLU_RS22780	0.87	+0.2
5,127,594	-		PFLU_RS22780	0.87	-0.5
5,127,594	-		PFLU_RS22780	0.87	-0.1
5,127,594	-		PFLU_RS22780	0.87	-0.7
5,127,594	-		PFLU_RS22780	0.87	-0.6
5,127,594	-		PFLU_RS22780	0.87	-0.7
5,127,594	-		PFLU_RS22780	0.87	-0.7
5,127,596	+		PFLU_RS22780	0.87	+1.4
5,127,596	+		PFLU_RS22780	0.87	+0.5
5,127,597	-		PFLU_RS22780	0.88	+0.4
5,127,597	-		PFLU_RS22780	0.88	+1.2
5,127,597	-		PFLU_RS22780	0.88	+0.7
5,127,597	-		PFLU_RS22780	0.88	-1.4
5,127,631	+				+0.8
5,127,632	-				-0.1
5,127,644	+				-0.7
5,127,644	+				-2.6
5,127,644	+				+1.0
5,127,644	+				-1.0
5,127,644	+				-0.1
5,127,645	-				-0.7
5,127,645	-				+1.7
5,127,645	-				-0.6
5,127,645	-				-0.4
5,127,663	+				+1.3
5,127,683	+				-2.6
5,127,683	+				+0.5
5,127,683	+				-0.8
5,127,684	-				-2.8
5,127,714	-				+0.7
5,127,730	+				+0.6
5,127,754	+				+0.9
5,127,766	+				+1.6
5,127,766	+				-1.5
5,127,766	+				-0.9
5,127,767	-				+0.2
5,127,767	-				-1.2
5,127,767	-				+0.6
5,127,767	-				-0.7
5,127,767	-				+0.6
5,127,769	-				-3.2
5,127,814	+				-2.1
5,127,814	+				+1.8
5,127,815	-				+0.5
5,127,815	-				+1.3
5,127,831	-				+1.2
5,127,848	+				-0.7
5,127,848	+				-0.8
5,127,848	+				+2.0
5,127,848	+				+0.5
5,127,848	+				+0.1
5,127,848	+				+0.6
5,127,848	+				+1.6
5,127,848	+				-0.2
5,127,848	+				-2.3
5,127,848	+				+0.6
5,127,848	+				+2.1
5,127,848	+				-0.0
5,127,848	+				-1.7
5,127,848	+				-0.4
5,127,848	+				-1.8
5,127,848	+				-1.5
5,127,848	+				-1.7
5,127,848	+				+0.0
5,127,848	+				-0.4
5,127,848	+				+1.4
5,127,848	+				-0.2
5,127,849	-				+0.7
5,127,849	-				+0.9
5,127,849	-				-0.0
5,127,849	-				+0.1
5,127,849	-				+0.2
5,127,849	-				-0.2
5,127,849	-				+0.6
5,127,849	-				-0.5
5,127,849	-				+0.8
5,127,849	-				+1.1
5,127,849	-				-0.9
5,127,849	-				+0.8
5,127,849	-				+3.0
5,127,849	-				-1.0
5,127,849	-				+0.4
5,127,849	-				-0.4
5,127,849	-				-1.7
5,127,849	-				-0.6
5,127,849	-				+0.5
5,127,849	-				-1.6
5,127,849	-				-1.4
5,127,849	-				+1.3
5,127,886	+				+1.4
5,127,886	+				-0.4
5,127,887	-				+1.6
5,127,887	-				+1.5
5,127,887	-				+0.3
5,127,896	+				-1.7
5,127,896	+				-1.2
5,127,896	+				+0.8
5,127,896	+				-2.4
5,127,897	-				-1.1
5,127,897	-				-0.2
5,127,897	-				-2.0
5,127,897	-				+0.6
5,127,972	+				-2.0
5,127,992	+		PFLU_RS22785	0.11	-0.6
5,127,992	+		PFLU_RS22785	0.11	-0.3
5,127,992	+		PFLU_RS22785	0.11	-1.9
5,127,993	-		PFLU_RS22785	0.11	-0.8
5,127,993	-		PFLU_RS22785	0.11	-2.2
5,127,993	-		PFLU_RS22785	0.11	+0.6
5,127,993	-		PFLU_RS22785	0.11	-2.9
5,128,180	+		PFLU_RS22785	0.29	-0.3
5,128,180	+		PFLU_RS22785	0.29	-0.7
5,128,180	+		PFLU_RS22785	0.29	-1.7
5,128,180	+		PFLU_RS22785	0.29	+0.1
5,128,180	+		PFLU_RS22785	0.29	+0.2
5,128,248	+		PFLU_RS22785	0.36	+1.2
5,128,249	-		PFLU_RS22785	0.36	+0.6
5,128,269	+		PFLU_RS22785	0.38	+0.9
5,128,284	+		PFLU_RS22785	0.39	+1.1
5,128,284	+		PFLU_RS22785	0.39	-0.1
5,128,284	+		PFLU_RS22785	0.39	-1.5
5,128,284	+		PFLU_RS22785	0.39	-0.1
5,128,284	+		PFLU_RS22785	0.39	-1.3
5,128,285	-		PFLU_RS22785	0.39	+0.1
5,128,285	-		PFLU_RS22785	0.39	-1.6
5,128,285	-		PFLU_RS22785	0.39	-0.7
5,128,375	+		PFLU_RS22785	0.48	-0.0
5,128,472	+		PFLU_RS22785	0.57	+0.6
5,128,476	+		PFLU_RS22785	0.57	-0.4
5,128,477	-		PFLU_RS22785	0.58	-1.2
5,128,513	+		PFLU_RS22785	0.61	-0.8
5,128,513	+		PFLU_RS22785	0.61	-0.2
5,128,604	+		PFLU_RS22785	0.70	-1.2
5,128,604	+		PFLU_RS22785	0.70	-1.0
5,128,604	+		PFLU_RS22785	0.70	-3.1
5,128,604	+		PFLU_RS22785	0.70	-0.1
5,128,604	+		PFLU_RS22785	0.70	-1.0
5,128,604	+		PFLU_RS22785	0.70	-1.4
5,128,604	+		PFLU_RS22785	0.70	-3.0
5,128,604	+		PFLU_RS22785	0.70	-1.4
5,128,604	+		PFLU_RS22785	0.70	-0.8
5,128,604	+		PFLU_RS22785	0.70	-2.5
5,128,604	+		PFLU_RS22785	0.70	-2.2
5,128,604	+		PFLU_RS22785	0.70	+0.5
5,128,604	+		PFLU_RS22785	0.70	-0.0
5,128,604	+		PFLU_RS22785	0.70	-2.7
5,128,604	+		PFLU_RS22785	0.70	-0.7
5,128,604	+		PFLU_RS22785	0.70	-1.3
5,128,605	-		PFLU_RS22785	0.70	-0.0
5,128,605	-		PFLU_RS22785	0.70	-3.0
5,128,635	+		PFLU_RS22785	0.73	-0.5
5,128,635	+		PFLU_RS22785	0.73	+0.2
5,128,635	+		PFLU_RS22785	0.73	-0.5
5,128,636	-		PFLU_RS22785	0.73	+1.0
5,128,636	-		PFLU_RS22785	0.73	-1.2
5,128,636	-		PFLU_RS22785	0.73	-1.7