Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13405

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
3,026,827	+		PFLU_RS13400	0.15	-1.6
3,026,828	-		PFLU_RS13400	0.15	-1.3
3,026,828	-		PFLU_RS13400	0.15	-1.7
3,026,828	-		PFLU_RS13400	0.15	-0.8
3,026,837	-		PFLU_RS13400	0.16	-3.5
3,026,837	-		PFLU_RS13400	0.16	-0.1
3,026,858	-		PFLU_RS13400	0.18	-1.1
3,027,118	+		PFLU_RS13400	0.47	+0.8
3,027,119	-		PFLU_RS13400	0.47	-2.6
3,027,119	-		PFLU_RS13400	0.47	-0.8
3,027,365	+		PFLU_RS13400	0.75	+0.2
3,027,406	+		PFLU_RS13400	0.80	-2.9
3,027,406	+		PFLU_RS13400	0.80	-2.0
3,027,406	+		PFLU_RS13400	0.80	-2.9
3,027,407	-		PFLU_RS13400	0.80	-0.6
3,027,407	-		PFLU_RS13400	0.80	-2.0
3,027,407	-		PFLU_RS13400	0.80	+0.4
3,027,407	-		PFLU_RS13400	0.80	-3.1
3,027,460	+		PFLU_RS13400	0.86	-0.6
3,027,460	+		PFLU_RS13400	0.86	-1.6
3,027,460	+		PFLU_RS13400	0.86	-2.0
3,027,478	+		PFLU_RS13400	0.88	-1.4
3,027,478	+		PFLU_RS13400	0.88	-0.6
3,027,478	+		PFLU_RS13400	0.88	-2.4
3,027,478	+		PFLU_RS13400	0.88	-3.2
3,027,479	-		PFLU_RS13400	0.88	-1.4
3,027,479	-		PFLU_RS13400	0.88	-1.8
3,027,479	-		PFLU_RS13400	0.88	+2.2
3,027,581	+				-2.0
3,027,581	+				-2.0
3,027,581	+				-1.4
3,027,581	+				-2.0
3,027,581	+				-1.9
3,027,581	+				-2.8
3,027,581	+				-3.4
3,027,581	+				-1.7
3,027,581	+				-3.5
3,027,582	-				-0.4
3,027,582	-				+0.2
3,027,582	-				+1.2
3,027,582	-				-1.1
3,027,582	-				-2.5
3,027,582	-				-2.5
3,027,582	-				-2.1
3,027,582	-				-1.1
3,027,582	-				-2.4
3,027,582	-				-1.4
3,027,582	-				+0.2
3,027,582	-				-1.4
3,027,590	+				-1.6
3,027,590	+				-0.9
3,027,591	-				-0.4
3,027,604	-				-2.4
3,027,682	+				-1.4
3,027,682	+				+0.2
3,027,683	-				-1.6
3,027,801	-				-0.4
3,027,847	+		PFLU_RS13405	0.13	-1.6
3,027,847	+		PFLU_RS13405	0.13	-2.6
3,027,848	-		PFLU_RS13405	0.13	-3.1
3,027,848	-		PFLU_RS13405	0.13	-2.7
3,027,848	-		PFLU_RS13405	0.13	-2.4
3,027,848	-		PFLU_RS13405	0.13	-1.6
3,027,934	+		PFLU_RS13405	0.19	-0.8
3,027,934	+		PFLU_RS13405	0.19	-1.4
3,027,934	+		PFLU_RS13405	0.19	-1.1
3,027,934	+		PFLU_RS13405	0.19	-3.0
3,027,934	+		PFLU_RS13405	0.19	-1.5
3,027,934	+		PFLU_RS13405	0.19	-0.2
3,027,934	+		PFLU_RS13405	0.19	-2.1
3,027,934	+		PFLU_RS13405	0.19	-2.0
3,027,935	-		PFLU_RS13405	0.19	-1.5
3,027,935	-		PFLU_RS13405	0.19	-1.0
3,027,935	-		PFLU_RS13405	0.19	-2.0
3,027,935	-		PFLU_RS13405	0.19	-2.5
3,027,935	-		PFLU_RS13405	0.19	-2.3
3,027,935	-		PFLU_RS13405	0.19	-2.3
3,027,946	+		PFLU_RS13405	0.20	-3.3
3,027,946	+		PFLU_RS13405	0.20	-2.9
3,027,947	-		PFLU_RS13405	0.20	-0.8
3,027,947	-		PFLU_RS13405	0.20	-3.3
3,027,947	-		PFLU_RS13405	0.20	-1.8
3,028,012	+		PFLU_RS13405	0.25	-0.4
3,028,013	-		PFLU_RS13405	0.25	-2.5
3,028,013	-		PFLU_RS13405	0.25	+0.2
3,028,013	-		PFLU_RS13405	0.25	-2.1
3,028,013	-		PFLU_RS13405	0.25	-2.1
3,028,013	-		PFLU_RS13405	0.25	-3.1
3,028,096	+		PFLU_RS13405	0.31	-2.1
3,028,097	-		PFLU_RS13405	0.31	-1.4
3,028,097	-		PFLU_RS13405	0.31	-2.8
3,028,142	+		PFLU_RS13405	0.35	-1.8
3,028,142	+		PFLU_RS13405	0.35	-0.9
3,028,313	-		PFLU_RS13405	0.48	-1.1
3,028,313	-		PFLU_RS13405	0.48	+0.2
3,028,313	-		PFLU_RS13405	0.48	-2.3
3,028,313	-		PFLU_RS13405	0.48	+0.2
3,028,459	+		PFLU_RS13405	0.59	-1.8
3,028,567	+		PFLU_RS13405	0.67	+0.3
3,028,568	-		PFLU_RS13405	0.67	-0.4
3,028,570	+		PFLU_RS13405	0.67	-1.4
3,028,570	+		PFLU_RS13405	0.67	-0.9
3,028,570	+		PFLU_RS13405	0.67	-2.1
3,028,570	+		PFLU_RS13405	0.67	+0.2
3,028,570	+		PFLU_RS13405	0.67	+0.2
3,028,570	+		PFLU_RS13405	0.67	+0.2
3,028,571	-		PFLU_RS13405	0.67	+0.4
3,028,571	-		PFLU_RS13405	0.67	-1.0
3,028,571	-		PFLU_RS13405	0.67	+1.2
3,028,571	-		PFLU_RS13405	0.67	-2.0
3,028,571	-		PFLU_RS13405	0.67	-2.6
3,028,606	+		PFLU_RS13405	0.70	-1.1
3,028,607	-		PFLU_RS13405	0.70	-2.1
3,028,607	-		PFLU_RS13405	0.70	-1.4
3,028,650	+		PFLU_RS13405	0.73	-2.0
3,028,650	+		PFLU_RS13405	0.73	-0.7
3,028,650	+		PFLU_RS13405	0.73	-1.1
3,028,650	+		PFLU_RS13405	0.73	-2.1
3,028,650	+		PFLU_RS13405	0.73	+2.2
3,028,650	+		PFLU_RS13405	0.73	-2.5
3,028,650	+		PFLU_RS13405	0.73	+1.2
3,028,650	+		PFLU_RS13405	0.73	-1.9
3,028,650	+		PFLU_RS13405	0.73	+1.2
3,028,650	+		PFLU_RS13405	0.73	-2.4
3,028,650	+		PFLU_RS13405	0.73	-2.9
3,028,650	+		PFLU_RS13405	0.73	-1.8
3,028,651	-		PFLU_RS13405	0.73	-1.4
3,028,651	-		PFLU_RS13405	0.73	-2.3
3,028,651	-		PFLU_RS13405	0.73	-2.3
3,028,651	-		PFLU_RS13405	0.73	+0.8
3,028,651	-		PFLU_RS13405	0.73	-2.7
3,028,651	-		PFLU_RS13405	0.73	-0.4
3,028,651	-		PFLU_RS13405	0.73	-1.6
3,028,651	-		PFLU_RS13405	0.73	-3.1
3,028,651	-		PFLU_RS13405	0.73	-1.6
3,028,651	-		PFLU_RS13405	0.73	-2.4
3,028,651	-		PFLU_RS13405	0.73	-0.1
3,028,666	+		PFLU_RS13405	0.74	-1.5
3,028,729	+		PFLU_RS13405	0.79	-0.6
3,028,729	+		PFLU_RS13405	0.79	+0.2
3,028,729	+		PFLU_RS13405	0.79	-1.8
3,028,729	+		PFLU_RS13405	0.79	+0.2
3,028,729	+		PFLU_RS13405	0.79	-2.5
3,028,729	+		PFLU_RS13405	0.79	-2.3
3,028,729	+		PFLU_RS13405	0.79	-0.8
3,028,729	+		PFLU_RS13405	0.79	-1.4
3,028,729	+		PFLU_RS13405	0.79	+1.2
3,028,729	+		PFLU_RS13405	0.79	-2.1
3,028,729	+		PFLU_RS13405	0.79	-0.4
3,028,730	-		PFLU_RS13405	0.79	-1.8
3,028,730	-		PFLU_RS13405	0.79	-0.4
3,028,730	-		PFLU_RS13405	0.79	-1.4
3,028,730	-		PFLU_RS13405	0.79	+0.2
3,028,730	-		PFLU_RS13405	0.79	-2.0
3,028,730	-		PFLU_RS13405	0.79	-3.6
3,028,730	-		PFLU_RS13405	0.79	-2.5
3,028,730	-		PFLU_RS13405	0.79	-2.0
3,028,746	+		PFLU_RS13405	0.80	-1.0
3,028,746	+		PFLU_RS13405	0.80	-0.7
3,028,746	+		PFLU_RS13405	0.80	-3.0
3,028,746	+		PFLU_RS13405	0.80	-2.0
3,028,747	-		PFLU_RS13405	0.81	+0.5
3,028,747	-		PFLU_RS13405	0.81	-1.1
3,028,747	-		PFLU_RS13405	0.81	+0.2
3,028,747	-		PFLU_RS13405	0.81	+0.2
3,028,747	-		PFLU_RS13405	0.81	-2.5
3,028,747	-		PFLU_RS13405	0.81	-1.1
3,028,970	+				-0.8
3,028,970	+				-1.0
3,028,970	+				-0.4
3,028,971	-				+0.7
3,029,047	+				-1.4
3,029,047	+				-1.6
3,029,047	+				-1.9
3,029,047	+				-0.4
3,029,047	+				-2.3
3,029,047	+				-2.3
3,029,047	+				-0.4
3,029,047	+				-1.2
3,029,047	+				+0.4
3,029,047	+				-0.8
3,029,047	+				-2.3
3,029,048	-				-2.0
3,029,048	-				-2.1
3,029,048	-				-2.1
3,029,048	-				-2.8
3,029,048	-				-1.0
3,029,048	-				-2.1
3,029,048	-				-1.1
3,029,048	-				-1.6
3,029,048	-				-1.6
3,029,048	-				+1.4
3,029,048	-				-1.1
3,029,048	-				-1.4
3,029,048	-				-2.0
3,029,048	-				-1.4
3,029,048	-				-2.1
3,029,048	-				-2.3
3,029,048	-				-1.5
3,029,067	-				-2.0
3,029,096	+				-0.1
3,029,096	+				-2.9
3,029,097	-				-0.8
3,029,097	-				+0.0
3,029,184	+				-0.4
3,029,185	-				-1.1
3,029,251	+				+0.9
3,029,251	+				-1.8
3,029,251	+				-2.1
3,029,252	-				-1.1
3,029,252	-				-0.1
3,029,252	-				-0.6
3,029,326	+		PFLU_RS13410	0.16	-2.8
3,029,411	-		PFLU_RS13410	0.25	-1.6
3,029,427	+		PFLU_RS13410	0.27	-1.4
3,029,427	+		PFLU_RS13410	0.27	-2.4
3,029,427	+		PFLU_RS13410	0.27	+0.2
3,029,428	-		PFLU_RS13410	0.27	-1.1
3,029,428	-		PFLU_RS13410	0.27	-0.5
3,029,428	-		PFLU_RS13410	0.27	-1.1
3,029,428	-		PFLU_RS13410	0.27	-1.6
3,029,448	+		PFLU_RS13410	0.29	-3.2
3,029,449	-		PFLU_RS13410	0.29	-1.4
3,029,449	-		PFLU_RS13410	0.29	+0.2
3,029,485	-		PFLU_RS13410	0.33	-1.1
3,029,485	-		PFLU_RS13410	0.33	-0.4
3,029,485	-		PFLU_RS13410	0.33	-1.4
3,029,499	+		PFLU_RS13410	0.35	+0.2
3,029,499	+		PFLU_RS13410	0.35	-1.4
3,029,499	+		PFLU_RS13410	0.35	-2.9
3,029,499	+		PFLU_RS13410	0.35	-0.8
3,029,499	+		PFLU_RS13410	0.35	-2.2
3,029,499	+		PFLU_RS13410	0.35	-1.1
3,029,500	-		PFLU_RS13410	0.35	-1.1
3,029,500	-		PFLU_RS13410	0.35	-0.8
3,029,500	-		PFLU_RS13410	0.35	-1.8
3,029,500	-		PFLU_RS13410	0.35	-0.8
3,029,500	-		PFLU_RS13410	0.35	+1.2
3,029,500	-		PFLU_RS13410	0.35	-0.2
3,029,500	-		PFLU_RS13410	0.35	-2.7
3,029,500	-		PFLU_RS13410	0.35	-1.4
3,029,527	+		PFLU_RS13410	0.38	-2.8
3,029,528	-		PFLU_RS13410	0.38	+0.2
3,029,577	+		PFLU_RS13410	0.43	-1.1
3,029,577	+		PFLU_RS13410	0.43	-2.1
3,029,578	-		PFLU_RS13410	0.44	-1.8
3,029,612	-		PFLU_RS13410	0.47	-2.3
3,029,713	-		PFLU_RS13410	0.58	-2.7
3,029,908	+		PFLU_RS13410	0.80	-1.8
3,029,908	+		PFLU_RS13410	0.80	-3.1
3,029,909	-		PFLU_RS13410	0.80	-2.0
3,029,910	+		PFLU_RS13410	0.80	-3.3
3,029,910	+		PFLU_RS13410	0.80	-1.1
3,029,910	+		PFLU_RS13410	0.80	-2.1
3,029,910	+		PFLU_RS13410	0.80	-2.0
3,029,910	+		PFLU_RS13410	0.80	-1.4
3,029,910	+		PFLU_RS13410	0.80	-0.4
3,029,910	+		PFLU_RS13410	0.80	-3.1
3,029,911	-		PFLU_RS13410	0.80	-2.9
3,029,911	-		PFLU_RS13410	0.80	-2.4
3,029,911	-		PFLU_RS13410	0.80	-2.3
3,029,911	-		PFLU_RS13410	0.80	-1.8
3,029,911	-		PFLU_RS13410	0.80	-2.1
3,029,911	-		PFLU_RS13410	0.80	-2.5
3,029,911	-		PFLU_RS13410	0.80	-2.4
3,029,911	-		PFLU_RS13410	0.80	-0.4