Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11295

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
2,499,694	-		PFLU_RS11290	0.13	-3.0
2,499,694	-		PFLU_RS11290	0.13	+2.5
2,499,922	-		PFLU_RS11290	0.33	-2.1
2,500,014	+		PFLU_RS11290	0.42	-0.6
2,500,014	+		PFLU_RS11290	0.42	+0.1
2,500,014	+		PFLU_RS11290	0.42	-0.6
2,500,014	+		PFLU_RS11290	0.42	-0.2
2,500,014	+		PFLU_RS11290	0.42	-1.6
2,500,015	-		PFLU_RS11290	0.42	+0.5
2,500,015	-		PFLU_RS11290	0.42	-0.9
2,500,015	-		PFLU_RS11290	0.42	+1.5
2,500,200	+		PFLU_RS11290	0.58	-2.2
2,500,200	+		PFLU_RS11290	0.58	-1.1
2,500,215	+		PFLU_RS11290	0.59	+2.2
2,500,215	+		PFLU_RS11290	0.59	-0.6
2,500,215	+		PFLU_RS11290	0.59	-1.0
2,500,215	+		PFLU_RS11290	0.59	+1.1
2,500,215	+		PFLU_RS11290	0.59	-0.5
2,500,215	+		PFLU_RS11290	0.59	+1.1
2,500,215	+		PFLU_RS11290	0.59	+0.4
2,500,215	+		PFLU_RS11290	0.59	+0.1
2,500,215	+		PFLU_RS11290	0.59	+0.9
2,500,216	-		PFLU_RS11290	0.59	+1.5
2,500,216	-		PFLU_RS11290	0.59	+0.4
2,500,216	-		PFLU_RS11290	0.59	-2.4
2,500,216	-		PFLU_RS11290	0.59	+1.8
2,500,216	-		PFLU_RS11290	0.59	+0.2
2,500,216	-		PFLU_RS11290	0.59	-0.9
2,500,216	-		PFLU_RS11290	0.59	+0.4
2,500,216	-		PFLU_RS11290	0.59	+2.6
2,500,216	-		PFLU_RS11290	0.59	-0.1
2,500,341	+		PFLU_RS11290	0.70	-0.6
2,500,341	+		PFLU_RS11290	0.70	+1.4
2,500,413	+		PFLU_RS11290	0.77	+0.9
2,500,413	+		PFLU_RS11290	0.77	+0.1
2,500,413	+		PFLU_RS11290	0.77	-0.0
2,500,448	+		PFLU_RS11290	0.80	-1.4
2,500,448	+		PFLU_RS11290	0.80	+2.1
2,500,680	+				-2.9
2,500,680	+				-1.6
2,500,681	-				+0.6
2,500,681	-				+0.7
2,500,699	+				-0.9
2,500,702	+				-0.6
2,500,702	+				-0.8
2,500,702	+				-1.6
2,500,702	+				+2.1
2,500,702	+				+1.1
2,500,702	+				+0.5
2,500,703	-				+0.9
2,500,703	-				-0.8
2,500,730	+				-2.5
2,500,887	+		PFLU_RS11295	0.13	-0.8
2,500,887	+		PFLU_RS11295	0.13	+0.5
2,500,887	+		PFLU_RS11295	0.13	+0.4
2,500,888	-		PFLU_RS11295	0.13	-2.5
2,500,888	-		PFLU_RS11295	0.13	+0.2
2,500,896	+		PFLU_RS11295	0.14	+0.6
2,500,896	+		PFLU_RS11295	0.14	-0.9
2,500,896	+		PFLU_RS11295	0.14	+0.7
2,500,896	+		PFLU_RS11295	0.14	+0.2
2,500,897	-		PFLU_RS11295	0.14	-0.6
2,500,897	-		PFLU_RS11295	0.14	-0.3
2,501,104	+		PFLU_RS11295	0.27	-0.6
2,501,104	+		PFLU_RS11295	0.27	+0.1
2,501,104	+		PFLU_RS11295	0.27	-0.2
2,501,104	+		PFLU_RS11295	0.27	+1.4
2,501,104	+		PFLU_RS11295	0.27	+2.0
2,501,105	-		PFLU_RS11295	0.27	+1.6
2,501,105	-		PFLU_RS11295	0.27	-2.8
2,501,105	-		PFLU_RS11295	0.27	-1.7
2,501,105	-		PFLU_RS11295	0.27	+1.4
2,501,105	-		PFLU_RS11295	0.27	-0.6
2,501,105	-		PFLU_RS11295	0.27	+1.5
2,501,112	+		PFLU_RS11295	0.28	-0.4
2,501,112	+		PFLU_RS11295	0.28	+1.7
2,501,112	+		PFLU_RS11295	0.28	-0.7
2,501,112	+		PFLU_RS11295	0.28	-2.6
2,501,112	+		PFLU_RS11295	0.28	+1.6
2,501,112	+		PFLU_RS11295	0.28	+0.8
2,501,113	-		PFLU_RS11295	0.28	-2.2
2,501,113	-		PFLU_RS11295	0.28	+0.8
2,501,113	-		PFLU_RS11295	0.28	-0.4
2,501,113	-		PFLU_RS11295	0.28	-1.1
2,501,113	-		PFLU_RS11295	0.28	-0.7
2,501,418	+		PFLU_RS11295	0.47	+1.1
2,501,419	-		PFLU_RS11295	0.48	+0.7
2,501,419	-		PFLU_RS11295	0.48	+1.3
2,501,628	+		PFLU_RS11295	0.61	+2.6
2,501,628	+		PFLU_RS11295	0.61	+0.6
2,501,628	+		PFLU_RS11295	0.61	-1.9
2,501,629	-		PFLU_RS11295	0.61	+1.1
2,501,629	-		PFLU_RS11295	0.61	+2.2
2,501,629	-		PFLU_RS11295	0.61	+2.4
2,501,629	-		PFLU_RS11295	0.61	+1.4
2,501,629	-		PFLU_RS11295	0.61	-2.3
2,501,629	-		PFLU_RS11295	0.61	+1.2
2,501,629	-		PFLU_RS11295	0.61	+0.8
2,501,629	-		PFLU_RS11295	0.61	-0.4
2,501,766	-		PFLU_RS11295	0.70	+1.9
2,501,766	-		PFLU_RS11295	0.70	-1.2
2,502,058	-		PFLU_RS11295	0.89	+0.2
2,502,097	+				-0.8
2,502,143	+				+0.3
2,502,143	+				+0.4
2,502,143	+				+0.7
2,502,216	+				-1.3
2,502,217	-				+0.0
2,502,217	-				-1.4
2,502,217	-				+2.4
2,502,261	-				+0.2
2,502,261	-				-0.3
2,502,353	+		PFLU_RS11300	0.12	+0.4
2,502,353	+		PFLU_RS11300	0.12	-2.1
2,502,365	+		PFLU_RS11300	0.13	+1.8
2,502,365	+		PFLU_RS11300	0.13	+0.6
2,502,366	-		PFLU_RS11300	0.13	-1.9
2,502,366	-		PFLU_RS11300	0.13	+0.1
2,502,366	-		PFLU_RS11300	0.13	-0.5
2,502,366	-		PFLU_RS11300	0.13	-0.9
2,502,366	-		PFLU_RS11300	0.13	+0.6
2,502,366	-		PFLU_RS11300	0.13	+0.6
2,502,366	-		PFLU_RS11300	0.13	-1.4
2,502,366	-		PFLU_RS11300	0.13	-0.3
2,502,440	+		PFLU_RS11300	0.21	-1.3
2,502,441	-		PFLU_RS11300	0.21	+0.6
2,502,441	-		PFLU_RS11300	0.21	+0.6
2,502,785	+		PFLU_RS11300	0.55	+1.4
2,502,785	+		PFLU_RS11300	0.55	-0.2
2,502,785	+		PFLU_RS11300	0.55	-1.4
2,502,786	-		PFLU_RS11300	0.55	-1.2
2,502,786	-		PFLU_RS11300	0.55	+0.7
2,502,786	-		PFLU_RS11300	0.55	-0.7
2,502,786	-		PFLU_RS11300	0.55	-0.9
2,502,786	-		PFLU_RS11300	0.55	-0.9
2,502,786	-		PFLU_RS11300	0.55	-1.2
2,502,786	-		PFLU_RS11300	0.55	-0.0
2,502,860	+		PFLU_RS11300	0.63	-0.9
2,502,860	+		PFLU_RS11300	0.63	+1.2
2,502,860	+		PFLU_RS11300	0.63	-2.7
2,502,860	+		PFLU_RS11300	0.63	-0.9
2,502,860	+		PFLU_RS11300	0.63	-1.2
2,502,860	+		PFLU_RS11300	0.63	-0.2
2,502,860	+		PFLU_RS11300	0.63	+0.6
2,502,860	+		PFLU_RS11300	0.63	+0.4
2,502,860	+		PFLU_RS11300	0.63	+1.4
2,502,860	+		PFLU_RS11300	0.63	+1.7
2,502,860	+		PFLU_RS11300	0.63	+1.4
2,502,861	-		PFLU_RS11300	0.63	+2.7
2,502,861	-		PFLU_RS11300	0.63	-2.9
2,502,861	-		PFLU_RS11300	0.63	+0.4
2,502,896	+		PFLU_RS11300	0.66	+1.4
2,502,896	+		PFLU_RS11300	0.66	-1.2
2,502,897	-		PFLU_RS11300	0.66	-1.0
2,502,897	-		PFLU_RS11300	0.66	-1.4
2,502,897	-		PFLU_RS11300	0.66	+0.3
2,502,897	-		PFLU_RS11300	0.66	-0.6
2,503,094	+		PFLU_RS11300	0.86	+0.3
2,503,094	+		PFLU_RS11300	0.86	+0.1
2,503,095	-		PFLU_RS11300	0.86	-3.6
2,503,095	-		PFLU_RS11300	0.86	-0.2
2,503,095	-		PFLU_RS11300	0.86	+0.2
2,503,215	+				+2.0