Experiment: D-Mannitol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS04145 and PFLU_RS04150 are separated by 124 nucleotides PFLU_RS04150 and PFLU_RS04155 are separated by 147 nucleotides PFLU_RS04155 and PFLU_RS04160 are separated by 24 nucleotides
PFLU_RS04145: PFLU_RS04145 - ABC transporter ATP-binding protein/permease, at 940,596 to 942,320
_RS04145
PFLU_RS04150: PFLU_RS04150 - DUF1043 family protein, at 942,445 to 942,882
_RS04150
PFLU_RS04155: PFLU_RS04155 - alpha/beta fold hydrolase, at 943,030 to 943,659
_RS04155
PFLU_RS04160: PFLU_RS04160 - tryptophan--tRNA ligase, at 943,684 to 945,039
_RS04160
Position (kb) 943
944 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.138 kb on + strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.139 kb on - strand, within PFLU_RS04145 at 942.140 kb on + strand, within PFLU_RS04145 at 942.140 kb on + strand, within PFLU_RS04145 at 942.140 kb on + strand, within PFLU_RS04145 at 942.141 kb on - strand, within PFLU_RS04145 at 942.141 kb on - strand, within PFLU_RS04145 at 942.141 kb on - strand, within PFLU_RS04145 at 942.141 kb on - strand, within PFLU_RS04145 at 942.189 kb on + strand at 942.189 kb on + strand at 942.189 kb on + strand at 942.190 kb on - strand at 942.190 kb on - strand at 942.319 kb on - strand at 942.362 kb on + strand at 942.362 kb on + strand at 942.362 kb on + strand at 942.362 kb on + strand at 942.362 kb on + strand at 942.363 kb on - strand at 942.363 kb on - strand at 942.363 kb on - strand at 942.363 kb on - strand at 942.363 kb on - strand at 942.363 kb on - strand at 942.363 kb on - strand at 942.390 kb on - strand at 942.427 kb on + strand at 942.427 kb on + strand at 942.427 kb on + strand at 942.428 kb on - strand at 942.428 kb on - strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.446 kb on + strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.447 kb on - strand at 942.461 kb on + strand at 942.462 kb on - strand at 942.462 kb on - strand at 942.506 kb on + strand, within PFLU_RS04150 at 942.506 kb on + strand, within PFLU_RS04150 at 942.507 kb on - strand, within PFLU_RS04150 at 942.507 kb on - strand, within PFLU_RS04150 at 942.655 kb on + strand, within PFLU_RS04150 at 942.655 kb on + strand, within PFLU_RS04150 at 942.655 kb on + strand, within PFLU_RS04150 at 942.656 kb on - strand, within PFLU_RS04150 at 942.656 kb on - strand, within PFLU_RS04150 at 942.656 kb on - strand, within PFLU_RS04150 at 942.665 kb on + strand, within PFLU_RS04150 at 942.665 kb on + strand, within PFLU_RS04150 at 942.665 kb on + strand, within PFLU_RS04150 at 942.665 kb on + strand, within PFLU_RS04150 at 942.715 kb on - strand, within PFLU_RS04150 at 942.731 kb on + strand, within PFLU_RS04150 at 942.731 kb on + strand, within PFLU_RS04150 at 942.731 kb on + strand, within PFLU_RS04150 at 942.731 kb on + strand, within PFLU_RS04150 at 942.731 kb on + strand, within PFLU_RS04150 at 942.732 kb on - strand, within PFLU_RS04150 at 942.865 kb on + strand at 942.865 kb on + strand at 942.865 kb on + strand at 942.865 kb on + strand at 942.865 kb on + strand at 942.865 kb on + strand at 942.866 kb on - strand at 942.866 kb on - strand at 942.866 kb on - strand at 942.866 kb on - strand at 942.866 kb on - strand at 942.866 kb on - strand at 942.866 kb on - strand at 942.895 kb on + strand at 942.895 kb on + strand at 942.896 kb on - strand at 942.896 kb on - strand at 942.896 kb on - strand at 942.896 kb on - strand at 942.897 kb on + strand at 942.897 kb on + strand at 942.897 kb on + strand at 942.897 kb on + strand at 942.898 kb on - strand at 942.898 kb on - strand at 942.912 kb on + strand at 942.912 kb on + strand at 942.912 kb on + strand at 942.913 kb on - strand at 942.913 kb on - strand at 942.913 kb on - strand at 942.913 kb on - strand at 942.938 kb on + strand at 942.938 kb on + strand at 942.938 kb on + strand at 942.938 kb on + strand at 942.938 kb on + strand at 942.939 kb on - strand at 942.939 kb on - strand at 942.939 kb on - strand at 942.939 kb on - strand at 942.939 kb on - strand at 942.939 kb on - strand at 942.939 kb on - strand at 942.940 kb on + strand at 942.949 kb on + strand at 942.950 kb on - strand at 942.950 kb on - strand at 942.980 kb on + strand at 942.980 kb on + strand at 942.981 kb on - strand at 942.981 kb on - strand at 942.981 kb on - strand at 942.981 kb on - strand at 942.981 kb on - strand at 942.984 kb on + strand at 942.984 kb on + strand at 943.084 kb on + strand at 943.085 kb on - strand at 943.161 kb on + strand, within PFLU_RS04155 at 943.161 kb on + strand, within PFLU_RS04155 at 943.161 kb on + strand, within PFLU_RS04155 at 943.162 kb on - strand, within PFLU_RS04155 at 943.162 kb on - strand, within PFLU_RS04155 at 943.169 kb on + strand, within PFLU_RS04155 at 943.169 kb on + strand, within PFLU_RS04155 at 943.185 kb on + strand, within PFLU_RS04155 at 943.186 kb on - strand, within PFLU_RS04155 at 943.186 kb on - strand, within PFLU_RS04155 at 943.209 kb on + strand, within PFLU_RS04155 at 943.210 kb on - strand, within PFLU_RS04155 at 943.210 kb on - strand, within PFLU_RS04155 at 943.225 kb on + strand, within PFLU_RS04155 at 943.225 kb on + strand, within PFLU_RS04155 at 943.226 kb on - strand, within PFLU_RS04155 at 943.226 kb on - strand, within PFLU_RS04155 at 943.226 kb on - strand, within PFLU_RS04155 at 943.226 kb on - strand, within PFLU_RS04155 at 943.226 kb on - strand, within PFLU_RS04155 at 943.226 kb on - strand, within PFLU_RS04155 at 943.261 kb on - strand, within PFLU_RS04155 at 943.261 kb on - strand, within PFLU_RS04155 at 943.261 kb on - strand, within PFLU_RS04155 at 943.261 kb on - strand, within PFLU_RS04155 at 943.261 kb on - strand, within PFLU_RS04155 at 943.363 kb on + strand, within PFLU_RS04155 at 943.537 kb on + strand, within PFLU_RS04155 at 943.537 kb on + strand, within PFLU_RS04155 at 943.537 kb on + strand, within PFLU_RS04155 at 943.538 kb on - strand, within PFLU_RS04155
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannitol (C) remove 942,138 + PFLU_RS04145 0.89 -1.3 942,138 + PFLU_RS04145 0.89 +0.1 942,138 + PFLU_RS04145 0.89 -1.1 942,138 + PFLU_RS04145 0.89 -0.8 942,138 + PFLU_RS04145 0.89 -0.9 942,138 + PFLU_RS04145 0.89 +1.3 942,138 + PFLU_RS04145 0.89 +1.3 942,138 + PFLU_RS04145 0.89 +0.3 942,138 + PFLU_RS04145 0.89 -1.8 942,138 + PFLU_RS04145 0.89 -1.2 942,138 + PFLU_RS04145 0.89 -0.2 942,138 + PFLU_RS04145 0.89 -2.4 942,138 + PFLU_RS04145 0.89 -2.0 942,138 + PFLU_RS04145 0.89 +1.2 942,138 + PFLU_RS04145 0.89 +0.4 942,138 + PFLU_RS04145 0.89 -0.9 942,138 + PFLU_RS04145 0.89 -1.7 942,138 + PFLU_RS04145 0.89 -0.6 942,138 + PFLU_RS04145 0.89 +1.2 942,138 + PFLU_RS04145 0.89 -0.2 942,138 + PFLU_RS04145 0.89 -1.9 942,138 + PFLU_RS04145 0.89 +1.4 942,138 + PFLU_RS04145 0.89 -0.4 942,138 + PFLU_RS04145 0.89 +0.3 942,138 + PFLU_RS04145 0.89 -0.2 942,138 + PFLU_RS04145 0.89 +0.3 942,138 + PFLU_RS04145 0.89 -0.3 942,139 - PFLU_RS04145 0.89 -1.6 942,139 - PFLU_RS04145 0.89 -1.2 942,139 - PFLU_RS04145 0.89 -0.3 942,139 - PFLU_RS04145 0.89 +1.0 942,139 - PFLU_RS04145 0.89 -0.1 942,139 - PFLU_RS04145 0.89 -1.7 942,139 - PFLU_RS04145 0.89 +1.1 942,139 - PFLU_RS04145 0.89 -0.1 942,139 - PFLU_RS04145 0.89 -0.1 942,139 - PFLU_RS04145 0.89 +2.0 942,139 - PFLU_RS04145 0.89 +0.1 942,139 - PFLU_RS04145 0.89 -1.4 942,139 - PFLU_RS04145 0.89 -1.9 942,139 - PFLU_RS04145 0.89 +1.3 942,139 - PFLU_RS04145 0.89 +0.9 942,139 - PFLU_RS04145 0.89 +0.1 942,139 - PFLU_RS04145 0.89 +0.3 942,139 - PFLU_RS04145 0.89 -1.9 942,139 - PFLU_RS04145 0.89 -1.2 942,139 - PFLU_RS04145 0.89 -0.1 942,139 - PFLU_RS04145 0.89 +0.8 942,139 - PFLU_RS04145 0.89 -0.2 942,139 - PFLU_RS04145 0.89 +0.2 942,139 - PFLU_RS04145 0.89 -3.1 942,139 - PFLU_RS04145 0.89 -1.2 942,139 - PFLU_RS04145 0.89 -1.6 942,140 + PFLU_RS04145 0.90 -1.1 942,140 + PFLU_RS04145 0.90 +1.4 942,140 + PFLU_RS04145 0.90 -0.2 942,141 - PFLU_RS04145 0.90 -0.0 942,141 - PFLU_RS04145 0.90 +0.2 942,141 - PFLU_RS04145 0.90 +0.1 942,141 - PFLU_RS04145 0.90 +0.5 942,189 + -0.2 942,189 + +0.3 942,189 + -0.8 942,190 - -0.4 942,190 - -2.7 942,319 - +0.1 942,362 + -0.2 942,362 + +1.2 942,362 + +0.1 942,362 + +1.3 942,362 + -1.1 942,363 - -2.3 942,363 - -0.2 942,363 - -1.4 942,363 - -1.6 942,363 - +0.1 942,363 - +0.8 942,363 - -0.9 942,390 - -0.6 942,427 + -0.9 942,427 + -1.0 942,427 + -0.3 942,428 - -0.2 942,428 - -0.4 942,446 + +0.8 942,446 + -1.4 942,446 + -1.9 942,446 + -1.5 942,446 + -1.3 942,446 + -1.0 942,446 + -0.4 942,446 + -0.8 942,446 + -0.4 942,447 - -0.2 942,447 - -0.2 942,447 - -1.6 942,447 - -2.6 942,447 - -3.1 942,447 - -0.5 942,447 - +1.2 942,447 - -0.4 942,447 - -0.1 942,447 - -0.8 942,447 - +0.2 942,461 + -0.2 942,462 - -1.0 942,462 - -0.1 942,506 + PFLU_RS04150 0.14 -1.8 942,506 + PFLU_RS04150 0.14 -2.4 942,507 - PFLU_RS04150 0.14 -0.7 942,507 - PFLU_RS04150 0.14 +0.8 942,655 + PFLU_RS04150 0.48 -2.4 942,655 + PFLU_RS04150 0.48 -1.6 942,655 + PFLU_RS04150 0.48 +2.6 942,656 - PFLU_RS04150 0.48 +0.3 942,656 - PFLU_RS04150 0.48 -1.2 942,656 - PFLU_RS04150 0.48 -1.9 942,665 + PFLU_RS04150 0.50 -1.8 942,665 + PFLU_RS04150 0.50 -0.7 942,665 + PFLU_RS04150 0.50 -1.0 942,665 + PFLU_RS04150 0.50 -1.8 942,715 - PFLU_RS04150 0.62 -3.2 942,731 + PFLU_RS04150 0.65 +0.4 942,731 + PFLU_RS04150 0.65 -2.3 942,731 + PFLU_RS04150 0.65 -2.3 942,731 + PFLU_RS04150 0.65 -2.8 942,731 + PFLU_RS04150 0.65 -2.4 942,732 - PFLU_RS04150 0.66 -2.4 942,865 + -3.2 942,865 + -3.4 942,865 + -0.8 942,865 + -1.7 942,865 + -2.2 942,865 + -2.6 942,866 - -0.7 942,866 - -1.6 942,866 - -2.0 942,866 - -0.6 942,866 - -4.1 942,866 - -1.3 942,866 - -1.1 942,895 + -2.7 942,895 + -2.2 942,896 - -2.0 942,896 - -1.1 942,896 - -0.9 942,896 - -1.6 942,897 + -0.6 942,897 + -1.5 942,897 + -0.3 942,897 + -1.5 942,898 - +0.3 942,898 - -1.2 942,912 + -2.9 942,912 + -0.9 942,912 + -2.0 942,913 - -0.6 942,913 - -3.0 942,913 - +0.4 942,913 - -0.6 942,938 + -1.7 942,938 + -0.6 942,938 + -2.6 942,938 + -4.2 942,938 + -0.8 942,939 - -2.7 942,939 - -1.8 942,939 - +0.4 942,939 - -1.7 942,939 - -0.2 942,939 - +2.0 942,939 - +1.0 942,940 + -1.0 942,949 + -2.8 942,950 - +1.8 942,950 - -0.7 942,980 + -1.1 942,980 + -1.5 942,981 - -1.2 942,981 - +2.1 942,981 - +1.6 942,981 - +1.4 942,981 - +1.9 942,984 + -1.2 942,984 + -0.5 943,084 + -0.7 943,085 - +2.3 943,161 + PFLU_RS04155 0.21 +0.6 943,161 + PFLU_RS04155 0.21 +0.3 943,161 + PFLU_RS04155 0.21 +0.5 943,162 - PFLU_RS04155 0.21 +1.8 943,162 - PFLU_RS04155 0.21 +2.6 943,169 + PFLU_RS04155 0.22 +1.3 943,169 + PFLU_RS04155 0.22 -2.3 943,185 + PFLU_RS04155 0.25 -0.3 943,186 - PFLU_RS04155 0.25 +1.5 943,186 - PFLU_RS04155 0.25 +2.8 943,209 + PFLU_RS04155 0.28 -1.2 943,210 - PFLU_RS04155 0.29 +2.6 943,210 - PFLU_RS04155 0.29 +2.5 943,225 + PFLU_RS04155 0.31 -2.2 943,225 + PFLU_RS04155 0.31 -1.0 943,226 - PFLU_RS04155 0.31 +2.1 943,226 - PFLU_RS04155 0.31 +2.5 943,226 - PFLU_RS04155 0.31 +3.4 943,226 - PFLU_RS04155 0.31 +2.6 943,226 - PFLU_RS04155 0.31 +1.9 943,226 - PFLU_RS04155 0.31 +1.5 943,261 - PFLU_RS04155 0.37 +1.6 943,261 - PFLU_RS04155 0.37 +2.2 943,261 - PFLU_RS04155 0.37 -0.9 943,261 - PFLU_RS04155 0.37 -0.7 943,261 - PFLU_RS04155 0.37 +2.5 943,363 + PFLU_RS04155 0.53 +0.3 943,537 + PFLU_RS04155 0.80 +0.9 943,537 + PFLU_RS04155 0.80 +1.8 943,537 + PFLU_RS04155 0.80 -1.0 943,538 - PFLU_RS04155 0.81 +1.6
Or see this region's nucleotide sequence