Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26440

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
5,912,167	+		PFLU_RS26430	0.82	-1.6
5,912,167	+		PFLU_RS26430	0.82	+1.1
5,912,168	-		PFLU_RS26430	0.82	-1.2
5,912,168	-		PFLU_RS26430	0.82	+1.1
5,912,168	-		PFLU_RS26430	0.82	+0.8
5,912,168	-		PFLU_RS26430	0.82	+0.3
5,912,168	-		PFLU_RS26430	0.82	-0.5
5,912,224	+		PFLU_RS26430	0.88	+0.5
5,912,224	+		PFLU_RS26430	0.88	+0.8
5,912,225	-		PFLU_RS26430	0.89	+0.4
5,912,251	+				+2.5
5,912,251	+				-0.5
5,912,251	+				-1.9
5,912,251	+				-3.2
5,912,251	+				+0.5
5,912,251	+				+0.7
5,912,251	+				+0.2
5,912,251	+				+0.7
5,912,251	+				-1.4
5,912,251	+				+0.2
5,912,251	+				+0.4
5,912,252	-				-0.8
5,912,252	-				+2.6
5,912,252	-				-1.6
5,912,272	+				-0.8
5,912,272	+				+1.4
5,912,272	+				-1.6
5,912,272	+				+2.0
5,912,272	+				-0.5
5,912,272	+				+0.1
5,912,272	+				-0.6
5,912,272	+				+0.1
5,912,272	+				-1.4
5,912,272	+				+1.4
5,912,272	+				-0.3
5,912,272	+				-0.3
5,912,272	+				-1.6
5,912,272	+				+0.1
5,912,272	+				-1.6
5,912,272	+				+0.9
5,912,272	+				-0.5
5,912,272	+				-1.3
5,912,272	+				-2.0
5,912,272	+				-2.5
5,912,272	+				+1.4
5,912,272	+				+0.6
5,912,272	+				+1.2
5,912,272	+				-0.8
5,912,272	+				-1.1
5,912,272	+				+0.8
5,912,272	+				-1.5
5,912,272	+				-1.7
5,912,272	+				-1.8
5,912,272	+				-3.0
5,912,272	+				-0.1
5,912,272	+				+0.8
5,912,272	+				-1.0
5,912,272	+				-3.6
5,912,273	-				+0.0
5,912,273	-				+1.7
5,912,273	-				+0.8
5,912,273	-				-2.0
5,912,273	-				-0.8
5,912,273	-				-1.6
5,912,273	-				+0.3
5,912,273	-				+1.0
5,912,273	-				-0.8
5,912,273	-				+0.4
5,912,273	-				+0.6
5,912,273	-				+1.6
5,912,273	-				+2.7
5,912,273	-				+0.3
5,912,273	-				-1.7
5,912,273	-				+2.3
5,912,273	-				-0.1
5,912,273	-				-0.4
5,912,273	-				-0.8
5,912,273	-				+0.8
5,912,273	-				+0.2
5,912,273	-				-1.0
5,912,273	-				+1.1
5,912,301	+				-0.0
5,912,302	-				-0.7
5,912,332	+				-1.6
5,912,350	+				+0.3
5,912,350	+				+1.2
5,912,350	+				-1.6
5,912,350	+				+1.6
5,912,350	+				+1.3
5,912,350	+				-0.4
5,912,350	+				+0.1
5,912,351	-				-0.8
5,912,351	-				-1.2
5,912,351	-				+1.0
5,912,351	-				+0.3
5,912,351	-				-2.2
5,912,351	-				+1.3
5,912,351	-				-0.5
5,912,351	-				-0.6
5,912,351	-				-1.2
5,912,351	-				-0.0
5,912,359	+				+0.7
5,912,359	+				+0.5
5,912,359	+				-2.1
5,912,359	+				+3.3
5,912,359	+				-0.5
5,912,359	+				-1.3
5,912,359	+				+0.5
5,912,359	+				+0.1
5,912,359	+				+1.6
5,912,359	+				+2.0
5,912,359	+				-0.0
5,912,360	-				+0.2
5,912,360	-				+0.6
5,912,360	-				-1.4
5,912,360	-				+3.7
5,912,360	-				-0.6
5,912,360	-				+1.3
5,912,364	+				+0.7
5,912,380	+				-0.1
5,912,386	+				-3.5
5,912,386	+				+2.2
5,912,386	+				+1.3
5,912,386	+				-0.3
5,912,387	-				+2.2
5,912,387	-				-1.7
5,912,387	-				-1.5
5,912,391	+				-1.8
5,912,392	-				+0.7
5,912,405	-				-0.8
5,912,405	-				-1.8
5,912,415	+				-0.7
5,912,416	-				+1.3
5,912,435	+				-0.7
5,912,444	+				-2.4
5,912,444	+				-3.2
5,912,444	+				-0.3
5,912,445	-				+0.7
5,912,445	-				-0.8
5,912,445	-				+1.1
5,912,445	-				+0.5
5,912,445	-				-0.3
5,912,446	+				+0.8
5,912,446	+				+1.2
5,912,484	+				-0.9
5,912,497	+				-3.0
5,912,498	-				+4.5
5,912,498	-				+0.2
5,912,498	-				+1.6
5,912,505	+				+1.5
5,912,505	+				-0.8
5,912,505	+				-1.1
5,912,505	+				+2.2
5,912,505	+				+1.1
5,912,505	+				-0.6
5,912,505	+				+1.0
5,912,505	+				+1.2
5,912,506	-				+0.9
5,912,506	-				+1.0
5,912,506	-				-2.9
5,912,506	-				-2.8
5,912,506	-				-0.3
5,912,506	-				-1.5
5,912,506	-				+1.6
5,912,567	+		PFLU_RS26435	0.17	+0.5
5,912,568	-		PFLU_RS26435	0.17	+1.0
5,912,654	+		PFLU_RS26435	0.36	-1.4
5,912,654	+		PFLU_RS26435	0.36	-1.6
5,912,654	+		PFLU_RS26435	0.36	+1.1
5,912,655	-		PFLU_RS26435	0.36	+0.3
5,912,655	-		PFLU_RS26435	0.36	+2.0
5,912,725	+		PFLU_RS26435	0.51	-1.4
5,912,725	+		PFLU_RS26435	0.51	+2.2
5,912,725	+		PFLU_RS26435	0.51	-2.9
5,912,726	-		PFLU_RS26435	0.52	-0.1
5,912,726	-		PFLU_RS26435	0.52	+1.2
5,912,726	-		PFLU_RS26435	0.52	-1.1
5,912,726	-		PFLU_RS26435	0.52	+0.1
5,912,726	-		PFLU_RS26435	0.52	-0.8
5,912,834	+		PFLU_RS26435	0.75	+0.3
5,912,834	+		PFLU_RS26435	0.75	+0.6
5,912,834	+		PFLU_RS26435	0.75	+0.1
5,912,834	+		PFLU_RS26435	0.75	+0.7
5,912,834	+		PFLU_RS26435	0.75	+2.0
5,912,834	+		PFLU_RS26435	0.75	+0.8
5,912,834	+		PFLU_RS26435	0.75	+1.0
5,912,834	+		PFLU_RS26435	0.75	-0.3
5,912,834	+		PFLU_RS26435	0.75	+0.8
5,912,834	+		PFLU_RS26435	0.75	-3.0
5,912,834	+		PFLU_RS26435	0.75	+1.6
5,912,834	+		PFLU_RS26435	0.75	-1.5
5,912,835	-		PFLU_RS26435	0.75	-0.6
5,912,835	-		PFLU_RS26435	0.75	+0.8
5,912,835	-		PFLU_RS26435	0.75	-2.2
5,912,895	-		PFLU_RS26435	0.88	+0.3
5,912,940	+				-0.9
5,912,941	-				-2.1
5,912,988	+				+0.5
5,912,988	+				+1.2
5,912,988	+				-1.6
5,912,988	+				-2.1
5,912,988	+				+0.4
5,912,989	-				+0.8
5,912,989	-				+3.8
5,912,989	-				-0.5
5,912,989	-				-1.8
5,913,182	+		PFLU_RS26440	0.54	-0.7
5,913,182	+		PFLU_RS26440	0.54	-0.8
5,913,182	+		PFLU_RS26440	0.54	-2.6
5,913,183	-		PFLU_RS26440	0.55	+0.2
5,913,183	-		PFLU_RS26440	0.55	-0.5
5,913,194	+		PFLU_RS26440	0.59	-1.5
5,913,293	+				-1.0
5,913,293	+				+0.7
5,913,293	+				+0.4
5,913,293	+				+0.9
5,913,293	+				-1.3
5,913,293	+				+0.8
5,913,294	-				-2.5
5,913,294	-				-0.8
5,913,294	-				-1.6
5,913,294	-				-0.8
5,913,294	-				+1.2
5,913,294	-				+0.5
5,913,294	-				+1.2
5,913,294	-				-2.2
5,913,294	-				-2.0
5,913,294	-				+0.6
5,913,294	-				-2.2
5,913,294	-				+0.5
5,913,294	-				+2.4
5,913,314	+				-3.4
5,913,314	+				-1.5
5,913,314	+				+0.4
5,913,314	+				-1.9
5,913,314	+				-1.2
5,913,314	+				-0.7
5,913,314	+				-1.9
5,913,315	-				+1.0
5,913,315	-				-1.6
5,913,315	-				+1.0
5,913,315	-				-3.1
5,913,324	+				-2.8
5,913,324	+				-0.1
5,913,324	+				-0.3
5,913,324	+				-0.8
5,913,324	+				+0.3
5,913,324	+				-0.4
5,913,324	+				+1.1
5,913,324	+				+0.4
5,913,324	+				-2.1
5,913,324	+				-2.3
5,913,324	+				-0.3
5,913,324	+				+1.0
5,913,324	+				-1.3
5,913,324	+				+1.7
5,913,324	+				-0.5
5,913,324	+				-1.9
5,913,324	+				+1.2
5,913,324	+				+2.8
5,913,324	+				+1.3
5,913,324	+				-1.0
5,913,324	+				+1.7
5,913,324	+				-1.8
5,913,325	-				-1.7
5,913,325	-				+2.4
5,913,325	-				-2.9
5,913,325	-				-3.2
5,913,325	-				+1.9
5,913,325	-				+1.8
5,913,325	-				-0.3
5,913,325	-				-1.5
5,913,325	-				-1.0
5,913,325	-				+0.9
5,913,325	-				+0.1
5,913,325	-				-2.2
5,913,325	-				+2.1
5,913,325	-				+1.0
5,913,325	-				-1.4
5,913,325	-				+0.8
5,913,325	-				-0.0
5,913,325	-				-0.3
5,913,325	-				+0.1
5,913,325	-				+0.1
5,913,325	-				-2.7
5,913,325	-				-1.0
5,913,325	-				-0.0
5,913,325	-				-2.5
5,913,325	-				-1.9
5,913,325	-				+0.6
5,913,325	-				+1.5
5,913,325	-				+2.0
5,913,325	-				-1.7
5,913,325	-				-0.2
5,913,325	-				+0.6
5,913,325	-				+2.3
5,913,327	+				-0.7
5,913,327	+				+0.2
5,913,327	+				+1.3
5,913,327	+				+0.6
5,913,327	+				+1.5
5,913,327	+				+1.6
5,913,327	+				+0.6
5,913,327	+				-0.8
5,913,327	+				-0.7
5,913,327	+				+1.4
5,913,327	+				+0.2
5,913,327	+				-0.2
5,913,327	+				-1.2
5,913,328	-				-1.7
5,913,328	-				+0.0
5,913,328	-				-1.8
5,913,328	-				+0.4
5,913,328	-				+1.8
5,913,328	-				+1.6
5,913,328	-				-2.3
5,913,328	-				-0.4
5,913,328	-				-0.0
5,913,328	-				+0.2
5,913,330	+				+0.2
5,913,330	+				-0.6
5,913,330	+				+1.2
5,913,331	-				-1.5
5,913,331	-				+0.5
5,913,331	-				+0.7
5,913,331	-				+1.4
5,913,331	-				-1.5
5,913,337	+				+2.8
5,913,337	+				+0.6
5,913,337	+				+1.5
5,913,337	+				-0.2
5,913,337	+				-0.6
5,913,337	+				+0.7
5,913,337	+				+0.4
5,913,337	+				-1.8
5,913,337	+				+0.4
5,913,337	+				-0.3
5,913,337	+				+0.0
5,913,338	-				-0.2
5,913,338	-				-1.7
5,913,338	-				+0.2
5,913,338	-				-0.5
5,913,338	-				-0.4
5,913,338	-				+0.7
5,913,348	+				+0.8
5,913,349	-		PFLU_RS26445	0.10	+0.2
5,913,397	+		PFLU_RS26445	0.19	-0.2
5,913,397	+		PFLU_RS26445	0.19	+1.1
5,913,408	+		PFLU_RS26445	0.20	-0.5
5,913,408	+		PFLU_RS26445	0.20	+0.4
5,913,408	+		PFLU_RS26445	0.20	-0.5
5,913,409	-		PFLU_RS26445	0.21	-2.0
5,913,517	+		PFLU_RS26445	0.40	-0.7
5,913,517	+		PFLU_RS26445	0.40	+0.3
5,913,517	+		PFLU_RS26445	0.40	+0.8
5,913,518	-		PFLU_RS26445	0.40	-2.3
5,913,518	-		PFLU_RS26445	0.40	-0.4
5,913,518	-		PFLU_RS26445	0.40	-0.1
5,913,518	-		PFLU_RS26445	0.40	+4.0
5,913,518	-		PFLU_RS26445	0.40	-1.4
5,913,518	-		PFLU_RS26445	0.40	-2.1
5,913,518	-		PFLU_RS26445	0.40	+2.0
5,913,518	-		PFLU_RS26445	0.40	+1.1
5,913,518	-		PFLU_RS26445	0.40	-2.0
5,913,518	-		PFLU_RS26445	0.40	-0.0
5,913,518	-		PFLU_RS26445	0.40	+1.4
5,913,518	-		PFLU_RS26445	0.40	-1.7
5,913,531	+		PFLU_RS26445	0.42	-1.2
5,913,531	+		PFLU_RS26445	0.42	+0.8
5,913,531	+		PFLU_RS26445	0.42	-2.4
5,913,532	-		PFLU_RS26445	0.42	+0.6
5,913,532	-		PFLU_RS26445	0.42	+1.2
5,913,541	+		PFLU_RS26445	0.44	+0.3
5,913,542	-		PFLU_RS26445	0.44	-0.5
5,913,542	-		PFLU_RS26445	0.44	+1.5
5,913,542	-		PFLU_RS26445	0.44	-1.5
5,913,556	+		PFLU_RS26445	0.47	-1.0
5,913,557	-		PFLU_RS26445	0.47	-2.3
5,913,574	-		PFLU_RS26445	0.50	-0.1
5,913,576	+		PFLU_RS26445	0.50	+1.1
5,913,576	+		PFLU_RS26445	0.50	+1.4
5,913,576	+		PFLU_RS26445	0.50	-1.6
5,913,576	+		PFLU_RS26445	0.50	-0.2
5,913,577	-		PFLU_RS26445	0.50	-1.8
5,913,577	-		PFLU_RS26445	0.50	+1.0
5,913,577	-		PFLU_RS26445	0.50	-1.2
5,913,577	-		PFLU_RS26445	0.50	-1.0
5,913,577	-		PFLU_RS26445	0.50	+2.3
5,913,577	-		PFLU_RS26445	0.50	+1.2
5,913,599	+		PFLU_RS26445	0.54	+1.5
5,913,599	+		PFLU_RS26445	0.54	-0.0
5,913,600	-		PFLU_RS26445	0.54	+0.1
5,913,612	+		PFLU_RS26445	0.56	-0.6
5,913,612	+		PFLU_RS26445	0.56	+0.2
5,913,612	+		PFLU_RS26445	0.56	-1.0
5,913,612	+		PFLU_RS26445	0.56	+0.1
5,913,612	+		PFLU_RS26445	0.56	-0.6
5,913,613	-		PFLU_RS26445	0.57	+1.0
5,913,613	-		PFLU_RS26445	0.57	-0.6
5,913,613	-		PFLU_RS26445	0.57	+1.6
5,913,651	+		PFLU_RS26445	0.63	-1.6
5,913,651	+		PFLU_RS26445	0.63	-2.7
5,913,651	+		PFLU_RS26445	0.63	+1.1
5,913,651	+		PFLU_RS26445	0.63	+0.9
5,913,651	+		PFLU_RS26445	0.63	-0.8
5,913,652	-		PFLU_RS26445	0.63	+2.3
5,913,652	-		PFLU_RS26445	0.63	+0.2
5,913,676	+		PFLU_RS26445	0.68	-2.6
5,913,676	+		PFLU_RS26445	0.68	+0.5
5,913,677	-		PFLU_RS26445	0.68	+0.9
5,913,683	+		PFLU_RS26445	0.69	+0.6
5,913,683	+		PFLU_RS26445	0.69	+2.3
5,913,683	+		PFLU_RS26445	0.69	-0.6
5,913,683	+		PFLU_RS26445	0.69	+0.8
5,913,684	-		PFLU_RS26445	0.69	+0.3
5,913,684	-		PFLU_RS26445	0.69	+1.4
5,913,684	-		PFLU_RS26445	0.69	+0.1
5,913,700	-		PFLU_RS26445	0.72	+0.8
5,913,700	-		PFLU_RS26445	0.72	+0.2
5,913,742	+		PFLU_RS26445	0.79	-2.4
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