Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21925

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
4,935,482	+		PFLU_RS21920	0.67	+1.4
4,935,482	+		PFLU_RS21920	0.67	-0.6
4,935,483	-		PFLU_RS21920	0.67	-0.1
4,935,483	-		PFLU_RS21920	0.67	-0.2
4,935,483	-		PFLU_RS21920	0.67	-3.1
4,935,483	-		PFLU_RS21920	0.67	+0.1
4,935,563	+		PFLU_RS21920	0.71	-2.0
4,935,563	+		PFLU_RS21920	0.71	-0.2
4,935,564	-		PFLU_RS21920	0.71	+1.2
4,935,564	-		PFLU_RS21920	0.71	-2.1
4,935,570	+		PFLU_RS21920	0.71	+1.8
4,935,570	+		PFLU_RS21920	0.71	-1.4
4,935,571	-		PFLU_RS21920	0.71	+0.5
4,935,571	-		PFLU_RS21920	0.71	-1.8
4,935,722	+		PFLU_RS21920	0.78	-1.7
4,935,848	+		PFLU_RS21920	0.84	-2.0
4,935,848	+		PFLU_RS21920	0.84	-0.9
4,935,848	+		PFLU_RS21920	0.84	+1.8
4,935,848	+		PFLU_RS21920	0.84	+0.8
4,935,848	+		PFLU_RS21920	0.84	-1.4
4,935,848	+		PFLU_RS21920	0.84	-0.2
4,935,849	-		PFLU_RS21920	0.84	-0.2
4,935,849	-		PFLU_RS21920	0.84	-0.6
4,935,849	-		PFLU_RS21920	0.84	-0.2
4,936,139	+				+1.8
4,936,184	+				+0.3
4,936,184	+				+2.1
4,936,184	+				+2.0
4,936,184	+				+1.3
4,936,184	+				-0.6
4,936,184	+				+1.1
4,936,184	+				+1.5
4,936,184	+				+1.1
4,936,184	+				-0.2
4,936,184	+				-0.1
4,936,184	+				-0.7
4,936,184	+				-0.7
4,936,184	+				-0.6
4,936,184	+				-1.2
4,936,184	+				-1.0
4,936,184	+				+2.3
4,936,184	+				-1.9
4,936,184	+				-0.1
4,936,184	+				-0.0
4,936,184	+				+3.0
4,936,184	+				+2.7
4,936,184	+				-0.1
4,936,184	+				-1.4
4,936,184	+				-1.8
4,936,184	+				+0.5
4,936,184	+				-0.2
4,936,184	+				-2.5
4,936,184	+				-1.0
4,936,184	+				-0.8
4,936,184	+				+0.8
4,936,184	+				-2.0
4,936,184	+				-1.9
4,936,184	+				+0.4
4,936,184	+				-1.0
4,936,184	+				+3.2
4,936,184	+				-0.0
4,936,184	+				-1.0
4,936,184	+				-0.8
4,936,184	+				-0.0
4,936,184	+				-1.9
4,936,184	+				+0.2
4,936,184	+				-0.7
4,936,184	+				+0.6
4,936,184	+				+0.2
4,936,184	+				-0.6
4,936,184	+				+1.0
4,936,184	+				-2.3
4,936,184	+				-1.2
4,936,184	+				-1.4
4,936,184	+				+1.1
4,936,184	+				-0.6
4,936,184	+				+0.3
4,936,184	+				-1.2
4,936,184	+				-1.0
4,936,184	+				-2.0
4,936,184	+				-0.2
4,936,184	+				-1.4
4,936,184	+				-0.2
4,936,184	+				+1.6
4,936,184	+				+0.8
4,936,184	+				+1.2
4,936,184	+				-0.6
4,936,184	+				+1.3
4,936,184	+				-1.9
4,936,184	+				-0.4
4,936,184	+				-1.6
4,936,184	+				-1.0
4,936,184	+				-1.4
4,936,184	+				-2.8
4,936,184	+				-1.4
4,936,185	-				+1.3
4,936,185	-				-0.4
4,936,185	-				-0.5
4,936,185	-				-1.1
4,936,185	-				-1.2
4,936,185	-				+1.4
4,936,185	-				+0.0
4,936,185	-				+1.0
4,936,185	-				+0.4
4,936,185	-				+0.7
4,936,185	-				-1.2
4,936,185	-				-0.2
4,936,185	-				+1.4
4,936,185	-				-0.2
4,936,185	-				-0.7
4,936,185	-				-0.6
4,936,185	-				+0.0
4,936,185	-				-0.2
4,936,185	-				+0.8
4,936,185	-				-2.0
4,936,185	-				-1.2
4,936,185	-				-0.3
4,936,185	-				-0.0
4,936,185	-				-1.9
4,936,185	-				-2.4
4,936,185	-				+1.5
4,936,185	-				+0.4
4,936,185	-				-0.6
4,936,185	-				+1.8
4,936,185	-				+0.6
4,936,185	-				+1.8
4,936,185	-				-1.7
4,936,185	-				-1.2
4,936,185	-				-1.4
4,936,185	-				+2.4
4,936,185	-				+1.3
4,936,185	-				-2.0
4,936,185	-				-1.5
4,936,185	-				+0.9
4,936,185	-				-0.4
4,936,185	-				+0.2
4,936,185	-				+1.8
4,936,185	-				+2.3
4,936,185	-				-0.2
4,936,185	-				-0.1
4,936,185	-				+0.2
4,936,185	-				-0.6
4,936,185	-				+0.1
4,936,185	-				-0.8
4,936,185	-				+0.5
4,936,185	-				-3.4
4,936,185	-				+1.5
4,936,185	-				+0.2
4,936,185	-				-2.7
4,936,185	-				-1.4
4,936,185	-				-1.6
4,936,185	-				+0.9
4,936,185	-				-1.4
4,936,185	-				-0.3
4,936,185	-				+0.5
4,936,185	-				+0.6
4,936,185	-				+2.8
4,936,185	-				-0.6
4,936,185	-				-2.3
4,936,185	-				-2.0
4,936,185	-				+1.0
4,936,185	-				-2.7
4,936,185	-				-1.7
4,936,185	-				+1.3
4,936,185	-				-1.4
4,936,185	-				-2.7
4,936,185	-				-1.4
4,936,185	-				+1.2
4,936,185	-				+1.2
4,936,185	-				-1.2
4,936,185	-				-2.1
4,936,185	-				-1.4
4,936,185	-				+0.7
4,936,185	-				+1.8
4,936,185	-				+0.2
4,936,186	+				-1.9
4,936,186	+				+1.4
4,936,186	+				+0.2
4,936,186	+				+2.1
4,936,186	+				+1.6
4,936,186	+				-0.2
4,936,186	+				+0.1
4,936,186	+				+0.8
4,936,186	+				+0.6
4,936,186	+				-0.8
4,936,186	+				-2.6
4,936,186	+				-0.6
4,936,187	-				+1.0
4,936,187	-				-1.9
4,936,187	-				-0.1
4,936,187	-				+1.3
4,936,187	-				+0.6
4,936,187	-				-2.1
4,936,187	-				+0.7
4,936,187	-				+0.2
4,936,187	-				+0.4
4,936,187	-				+0.1
4,936,187	-				-0.2
4,936,187	-				-2.5
4,936,187	-				-1.2
4,936,187	-				+0.1
4,936,187	-				+1.0
4,936,187	-				+0.2
4,936,187	-				+1.0
4,936,187	-				-1.7
4,936,187	-				-1.4
4,936,187	-				+0.2
4,936,187	-				+0.6
4,936,197	+				+1.1
4,936,216	+				-0.6
4,936,216	+				-0.6
4,936,217	-				+0.7
4,936,252	+				-2.8
4,936,252	+				-2.0
4,936,253	-				-1.1
4,936,317	+				-1.0
4,936,317	+				+0.2
4,936,317	+				-1.4
4,936,317	+				+0.6
4,936,317	+				-1.2
4,936,317	+				-0.6
4,936,317	+				+1.3
4,936,317	+				-0.5
4,936,317	+				+1.0
4,936,318	-				+2.2
4,936,318	-				-0.6
4,936,318	-				+1.2
4,936,318	-				-0.6
4,936,318	-				+0.2
4,936,318	-				+0.3
4,936,318	-				+1.0
4,936,318	-				+3.1
4,936,318	-				+2.0
4,936,318	-				+3.1
4,936,318	-				+1.4
4,936,318	-				-0.1
4,936,318	-				+1.8
4,936,318	-				+0.0
4,936,320	-				+0.4
4,936,320	-				-1.4
4,936,368	-				+0.2
4,936,371	+				+0.1
4,936,371	+				-1.7
4,936,371	+				+1.5
4,936,371	+				-1.6
4,936,372	-				+2.0
4,936,372	-				+1.0
4,936,372	-				+0.2
4,936,372	-				+1.9
4,936,372	-				+1.0
4,936,372	-				+1.1
4,936,385	+				+0.4
4,936,385	+				-0.8
4,936,385	+				-0.4
4,936,386	-				+1.3
4,936,386	-				+1.2
4,936,386	-				+0.6
4,936,386	-				+0.7
4,936,386	-				+1.9
4,936,421	+				-0.8
4,936,422	-				+0.3
4,936,439	-				+0.2
4,936,449	+				-2.6
4,936,449	+				-0.4
4,936,449	+				-0.8
4,936,449	+				+1.2
4,936,449	+				-1.4
4,936,449	+				-0.6
4,936,450	-				+0.2
4,936,450	-				+3.6
4,936,450	-				+1.9
4,936,450	-				+1.2
4,936,478	+				-1.4
4,936,478	+				-1.2
4,936,479	-				+2.0
4,936,479	-				+2.2
4,936,534	+		PFLU_RS21925	0.13	-0.6
4,936,534	+		PFLU_RS21925	0.13	-1.2
4,936,534	+		PFLU_RS21925	0.13	+1.2
4,936,534	+		PFLU_RS21925	0.13	+3.1
4,936,534	+		PFLU_RS21925	0.13	+0.5
4,936,535	-		PFLU_RS21925	0.13	+0.8
4,936,535	-		PFLU_RS21925	0.13	+1.3
4,936,535	-		PFLU_RS21925	0.13	+2.5
4,936,535	-		PFLU_RS21925	0.13	+1.6
4,936,535	-		PFLU_RS21925	0.13	+1.8
4,936,633	+		PFLU_RS21925	0.30	+3.5
4,936,634	-		PFLU_RS21925	0.30	+2.0
4,936,959	-		PFLU_RS21925	0.85	-2.1
4,936,987	+		PFLU_RS21925	0.90	+2.6
4,936,987	+		PFLU_RS21925	0.90	-0.8
4,936,987	+		PFLU_RS21925	0.90	+0.3
4,936,988	-				+1.7
4,937,094	+				+0.1
4,937,094	+				-1.4
4,937,125	+		PFLU_RS21930	0.15	+0.6
4,937,223	+		PFLU_RS21930	0.41	-1.1
4,937,223	+		PFLU_RS21930	0.41	+0.5
4,937,223	+		PFLU_RS21930	0.41	+1.4
4,937,223	+		PFLU_RS21930	0.41	+1.2
4,937,223	+		PFLU_RS21930	0.41	+1.0
4,937,224	-		PFLU_RS21930	0.41	-1.6
4,937,224	-		PFLU_RS21930	0.41	-1.8
4,937,224	-		PFLU_RS21930	0.41	+0.6
4,937,224	-		PFLU_RS21930	0.41	+0.3
4,937,224	-		PFLU_RS21930	0.41	-1.5
4,937,271	+		PFLU_RS21930	0.53	+0.4
4,937,271	+		PFLU_RS21930	0.53	-0.2
4,937,272	-		PFLU_RS21930	0.53	+1.3
4,937,272	-		PFLU_RS21930	0.53	-1.4
4,937,289	-		PFLU_RS21930	0.58	+2.0
4,937,310	+		PFLU_RS21930	0.63	+0.8
4,937,310	+		PFLU_RS21930	0.63	-0.6
4,937,310	+		PFLU_RS21930	0.63	-0.0
4,937,311	-		PFLU_RS21930	0.64	+1.9
4,937,311	-		PFLU_RS21930	0.64	-2.9
4,937,352	+		PFLU_RS21930	0.74	-2.2
4,937,415	+				-1.7
4,937,415	+				+0.7
4,937,415	+				-1.2
4,937,415	+				-1.0
4,937,415	+				+3.3
4,937,415	+				-1.6
4,937,415	+				-0.2
4,937,415	+				+0.8
4,937,415	+				+0.9
4,937,415	+				+1.8
4,937,415	+				+2.3
4,937,415	+				+2.2
4,937,415	+				-1.6
4,937,415	+				-0.6
4,937,415	+				-2.6
4,937,415	+				+0.2
4,937,415	+				+1.0
4,937,415	+				+1.8
4,937,416	-				-0.8
4,937,416	-				-0.5
4,937,416	-				-1.8
4,937,416	-				+1.2
4,937,416	-				-1.8
4,937,416	-				+3.7
4,937,416	-				+0.3
4,937,416	-				-0.2
4,937,416	-				-0.9
4,937,416	-				+0.4
4,937,416	-				+0.4
4,937,416	-				-2.7
4,937,553	+				+0.2
4,937,553	+				+0.4
4,937,553	+				+0.4
4,937,553	+				+1.2
4,937,553	+				-0.7
4,937,554	-				+0.3
4,937,554	-				-0.2
4,937,554	-				-0.3
4,937,554	-				-1.8
4,937,565	+				-0.2
4,937,565	+				+2.6
4,937,565	+				+1.5
4,937,565	+				+1.2
4,937,565	+				-1.5
4,937,566	-				+0.9
4,937,566	-				-1.2
4,937,611	+				-0.2
4,937,611	+				+1.0
4,937,611	+				+1.8
4,937,611	+				+1.6
4,937,611	+				-1.6
4,937,611	+				-0.8
4,937,611	+				-0.1
4,937,611	+				-1.4
4,937,611	+				-0.8
4,937,611	+				+1.4
4,937,611	+				-2.9
4,937,611	+				+0.9
4,937,611	+				+1.0
4,937,611	+				+1.8
4,937,611	+				-1.8
4,937,611	+				+0.4
4,937,611	+				+1.1
4,937,611	+				+0.8
4,937,611	+				-2.6
4,937,611	+				-0.1
4,937,611	+				-1.1
4,937,612	-				+1.5
4,937,612	-				-1.4
4,937,612	-				+0.2
4,937,612	-				+0.8
4,937,612	-				+3.6
4,937,612	-				-0.6
4,937,612	-				+0.3
4,937,612	-				-1.4
4,937,612	-				+0.9
4,937,612	-				+0.8
4,937,612	-				-1.3
4,937,612	-				-1.4
4,937,612	-				-1.8
4,937,612	-				+0.4
4,937,612	-				-0.4
4,937,612	-				-0.2
4,937,612	-				+0.8
4,937,612	-				+0.2
4,937,613	+				-0.6
4,937,613	+				-0.0
4,937,614	-				-1.0
4,937,614	-				-1.7
4,937,614	-				+2.0
4,937,622	+				-0.4
4,937,622	+				+1.5
4,937,622	+				+0.8
4,937,623	-				+1.0
4,937,623	-				+1.6
4,937,623	-				+0.2
4,937,623	-				-0.2
4,937,623	-				-0.1
4,937,623	-				-0.5
4,937,623	-				+1.4
4,937,623	-				+1.5
4,937,641	+				-1.2
4,937,641	+				+1.8
4,937,641	+				-1.6
4,937,641	+				-0.4
4,937,641	+				-1.1
4,937,641	+				+0.3
4,937,642	-				-0.7
4,937,642	-				+0.5
4,937,642	-				-1.2
4,937,642	-				+0.4
4,937,642	-				-2.6
4,937,678	+				+1.5
4,937,678	+				-2.1
4,937,678	+				-0.8
4,937,678	+				+2.0
4,937,678	+				-1.9
4,937,678	+				+1.0
4,937,678	+				-0.3
4,937,678	+				-0.2
4,937,678	+				-0.2
4,937,678	+				-0.7
4,937,678	+				+1.9
4,937,678	+				+0.4
4,937,678	+				+2.9
4,937,678	+				-0.7
4,937,678	+				-0.6
4,937,678	+				+0.5
4,937,678	+				+0.4
4,937,678	+				-3.3
4,937,679	-				-0.7
4,937,679	-				-1.1
4,937,679	-				-1.7
4,937,679	-				-0.4
4,937,679	-				+1.3
4,937,679	-				-2.6
4,937,679	-				-0.9
4,937,679	-				-1.1
4,937,679	-				+0.8
4,937,679	-				+0.0
4,937,692	+				+1.0
4,937,692	+				+0.3
4,937,692	+				+2.5
4,937,692	+				+3.2
4,937,692	+				+0.9
4,937,692	+				-0.6
4,937,692	+				+3.1
4,937,692	+				-0.6
4,937,692	+				-1.1
4,937,692	+				-0.9
4,937,692	+				+1.1
4,937,692	+				-0.2
4,937,692	+				-1.6
4,937,693	-				-2.6
4,937,693	-				+1.2
4,937,693	-				-0.6
4,937,693	-				+0.8
4,937,693	-				-0.1
4,937,693	-				-0.2
4,937,693	-				-0.2
4,937,693	-				+1.6
4,937,693	-				-0.6
4,937,693	-				-1.0
4,937,693	-				+0.9
4,937,693	-				+1.9
4,937,693	-				+0.9
4,937,693	-				-0.8
4,937,694	+				-0.6
4,937,694	+				-1.8
4,937,694	+				-0.9
4,937,694	+				+0.9
4,937,694	+				-2.1
4,937,694	+				+0.2
4,937,695	-				-2.2
4,937,695	-				+1.2
4,937,695	-				+0.0
4,937,695	-				-1.6
4,937,695	-				-2.5
4,937,713	+				+0.7
4,937,714	-				+0.1
4,937,745	-				-3.1
4,937,785	+				+1.8
4,937,785	+				-2.3
4,937,785	+				+1.3
4,937,785	+				-2.3
4,937,786	-				-0.6
4,937,786	-				-0.4
4,937,786	-				+1.8
4,937,801	+				+1.6
4,937,801	+				-1.1
4,937,801	+				-0.2
4,937,801	+				+1.7
4,937,801	+				+0.6
4,937,801	+				+2.3
4,937,801	+				-0.8
4,937,801	+				-1.4
4,937,801	+				+0.4
4,937,802	-				+1.9
4,937,802	-				+1.1
4,937,802	-				-0.2
4,937,802	-				+1.1
4,937,802	-				+0.8
4,937,802	-				-2.3
4,937,802	-				-2.2
4,937,802	-				+2.5
4,937,802	-				-2.5
4,937,802	-				-1.1
4,937,802	-				+1.8
4,937,802	-				-1.2
4,937,802	-				+0.5
4,937,802	-				+1.4
4,937,883	+				+0.9
4,937,884	-				+0.3
4,937,951	+		PFLU_RS21935	0.11	-0.8
4,937,952	-		PFLU_RS21935	0.11	+1.2
4,937,959	+		PFLU_RS21935	0.11	+1.8
4,937,959	+		PFLU_RS21935	0.11	-0.6
4,937,959	+		PFLU_RS21935	0.11	+0.7
4,937,959	+		PFLU_RS21935	0.11	-0.6
4,937,959	+		PFLU_RS21935	0.11	+1.3
4,937,959	+		PFLU_RS21935	0.11	+0.4
4,937,959	+		PFLU_RS21935	0.11	+0.7
4,937,959	+		PFLU_RS21935	0.11	+1.2
4,937,960	-		PFLU_RS21935	0.11	+1.3
4,937,960	-		PFLU_RS21935	0.11	-2.9
4,937,960	-		PFLU_RS21935	0.11	-2.6
4,937,960	-		PFLU_RS21935	0.11	-1.8
4,937,960	-		PFLU_RS21935	0.11	+0.3
4,937,960	-		PFLU_RS21935	0.11	+0.5
4,937,960	-		PFLU_RS21935	0.11	-2.1
4,937,960	-		PFLU_RS21935	0.11	+2.2
4,937,960	-		PFLU_RS21935	0.11	+1.4
4,937,960	-		PFLU_RS21935	0.11	+0.0
4,937,960	-		PFLU_RS21935	0.11	+1.7
4,937,960	-		PFLU_RS21935	0.11	-1.0
4,937,961	+		PFLU_RS21935	0.11	+1.1
4,937,961	+		PFLU_RS21935	0.11	+0.1
4,937,962	-		PFLU_RS21935	0.11	-1.7
4,937,962	-		PFLU_RS21935	0.11	+0.8