Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21915

Experiment: D-Mannitol (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannitol (C)
4,932,522	+		PFLU_RS21910	0.65	+0.6
4,932,522	+		PFLU_RS21910	0.65	+0.4
4,932,523	-		PFLU_RS21910	0.65	+0.8
4,932,523	-		PFLU_RS21910	0.65	+0.5
4,932,523	-		PFLU_RS21910	0.65	+2.1
4,932,537	+		PFLU_RS21910	0.65	-1.4
4,932,537	+		PFLU_RS21910	0.65	+2.8
4,932,537	+		PFLU_RS21910	0.65	+1.4
4,932,537	+		PFLU_RS21910	0.65	-1.2
4,932,537	+		PFLU_RS21910	0.65	+0.9
4,932,537	+		PFLU_RS21910	0.65	+0.8
4,932,537	+		PFLU_RS21910	0.65	-1.4
4,932,538	-		PFLU_RS21910	0.65	-0.1
4,932,538	-		PFLU_RS21910	0.65	-0.8
4,932,538	-		PFLU_RS21910	0.65	-1.8
4,932,538	-		PFLU_RS21910	0.65	+0.3
4,932,538	-		PFLU_RS21910	0.65	+0.3
4,932,538	-		PFLU_RS21910	0.65	+2.4
4,932,538	-		PFLU_RS21910	0.65	+1.0
4,932,538	-		PFLU_RS21910	0.65	+1.2
4,932,538	-		PFLU_RS21910	0.65	+1.5
4,932,538	-		PFLU_RS21910	0.65	+1.7
4,932,538	-		PFLU_RS21910	0.65	+1.8
4,932,539	+		PFLU_RS21910	0.65	+0.9
4,932,539	+		PFLU_RS21910	0.65	-1.4
4,932,539	+		PFLU_RS21910	0.65	+0.9
4,932,539	+		PFLU_RS21910	0.65	-0.6
4,932,539	+		PFLU_RS21910	0.65	-1.4
4,932,539	+		PFLU_RS21910	0.65	+0.4
4,932,539	+		PFLU_RS21910	0.65	-1.6
4,932,539	+		PFLU_RS21910	0.65	+1.6
4,932,540	-		PFLU_RS21910	0.65	+1.0
4,932,540	-		PFLU_RS21910	0.65	+0.1
4,932,540	-		PFLU_RS21910	0.65	+0.4
4,932,540	-		PFLU_RS21910	0.65	+0.8
4,932,540	-		PFLU_RS21910	0.65	-0.6
4,932,540	-		PFLU_RS21910	0.65	+2.2
4,932,540	-		PFLU_RS21910	0.65	+2.2
4,932,540	-		PFLU_RS21910	0.65	-1.1
4,932,540	-		PFLU_RS21910	0.65	-0.4
4,932,540	-		PFLU_RS21910	0.65	+1.0
4,932,540	-		PFLU_RS21910	0.65	+1.0
4,932,612	+		PFLU_RS21910	0.69	+0.7
4,932,700	+		PFLU_RS21910	0.73	+0.9
4,932,700	+		PFLU_RS21910	0.73	+1.6
4,932,700	+		PFLU_RS21910	0.73	+2.2
4,932,700	+		PFLU_RS21910	0.73	+0.9
4,932,700	+		PFLU_RS21910	0.73	-1.9
4,932,700	+		PFLU_RS21910	0.73	+1.2
4,932,700	+		PFLU_RS21910	0.73	+1.8
4,932,700	+		PFLU_RS21910	0.73	+1.6
4,932,700	+		PFLU_RS21910	0.73	+0.6
4,932,700	+		PFLU_RS21910	0.73	+1.8
4,932,700	+		PFLU_RS21910	0.73	+2.2
4,932,700	+		PFLU_RS21910	0.73	+2.9
4,932,700	+		PFLU_RS21910	0.73	-0.2
4,932,700	+		PFLU_RS21910	0.73	+1.1
4,932,700	+		PFLU_RS21910	0.73	+2.5
4,932,700	+		PFLU_RS21910	0.73	+1.5
4,932,700	+		PFLU_RS21910	0.73	+2.8
4,932,700	+		PFLU_RS21910	0.73	+3.4
4,932,700	+		PFLU_RS21910	0.73	+2.7
4,932,701	-		PFLU_RS21910	0.73	+0.3
4,932,701	-		PFLU_RS21910	0.73	+1.2
4,932,701	-		PFLU_RS21910	0.73	+2.5
4,932,701	-		PFLU_RS21910	0.73	-0.2
4,932,701	-		PFLU_RS21910	0.73	+2.1
4,932,701	-		PFLU_RS21910	0.73	+2.1
4,932,701	-		PFLU_RS21910	0.73	-1.3
4,932,701	-		PFLU_RS21910	0.73	+1.3
4,932,750	+		PFLU_RS21910	0.75	-2.2
4,932,750	+		PFLU_RS21910	0.75	+0.8
4,932,750	+		PFLU_RS21910	0.75	-0.4
4,932,750	+		PFLU_RS21910	0.75	+1.6
4,932,750	+		PFLU_RS21910	0.75	+0.8
4,932,750	+		PFLU_RS21910	0.75	+0.2
4,932,750	+		PFLU_RS21910	0.75	+1.9
4,932,750	+		PFLU_RS21910	0.75	+2.2
4,932,750	+		PFLU_RS21910	0.75	+2.1
4,932,750	+		PFLU_RS21910	0.75	+2.8
4,932,750	+		PFLU_RS21910	0.75	+2.5
4,932,750	+		PFLU_RS21910	0.75	+2.3
4,932,750	+		PFLU_RS21910	0.75	+1.8
4,932,750	+		PFLU_RS21910	0.75	+1.4
4,932,750	+		PFLU_RS21910	0.75	+0.1
4,932,751	-		PFLU_RS21910	0.75	-0.4
4,932,751	-		PFLU_RS21910	0.75	+1.2
4,932,751	-		PFLU_RS21910	0.75	+0.5
4,932,751	-		PFLU_RS21910	0.75	-0.4
4,932,751	-		PFLU_RS21910	0.75	+0.9
4,932,751	-		PFLU_RS21910	0.75	-0.3
4,932,751	-		PFLU_RS21910	0.75	-0.2
4,932,751	-		PFLU_RS21910	0.75	+1.2
4,932,751	-		PFLU_RS21910	0.75	+1.2
4,932,751	-		PFLU_RS21910	0.75	+2.3
4,932,751	-		PFLU_RS21910	0.75	+2.2
4,932,751	-		PFLU_RS21910	0.75	+0.8
4,932,762	+		PFLU_RS21910	0.75	+2.8
4,932,762	+		PFLU_RS21910	0.75	+0.2
4,932,763	-		PFLU_RS21910	0.76	+2.1
4,932,763	-		PFLU_RS21910	0.76	+1.0
4,932,789	+		PFLU_RS21910	0.77	+1.9
4,932,789	+		PFLU_RS21910	0.77	+2.5
4,932,789	+		PFLU_RS21910	0.77	-2.7
4,932,789	+		PFLU_RS21910	0.77	-1.2
4,932,789	+		PFLU_RS21910	0.77	+1.8
4,932,789	+		PFLU_RS21910	0.77	+0.8
4,932,789	+		PFLU_RS21910	0.77	+1.1
4,932,789	+		PFLU_RS21910	0.77	+1.1
4,932,789	+		PFLU_RS21910	0.77	-0.2
4,932,789	+		PFLU_RS21910	0.77	+0.8
4,932,789	+		PFLU_RS21910	0.77	+1.0
4,932,789	+		PFLU_RS21910	0.77	+1.2
4,932,789	+		PFLU_RS21910	0.77	+2.0
4,932,789	+		PFLU_RS21910	0.77	+0.4
4,932,789	+		PFLU_RS21910	0.77	+2.1
4,932,789	+		PFLU_RS21910	0.77	+1.2
4,932,789	+		PFLU_RS21910	0.77	-1.1
4,932,790	-		PFLU_RS21910	0.77	-0.7
4,932,790	-		PFLU_RS21910	0.77	+0.4
4,932,790	-		PFLU_RS21910	0.77	+0.9
4,932,790	-		PFLU_RS21910	0.77	+2.1
4,932,790	-		PFLU_RS21910	0.77	+2.5
4,932,790	-		PFLU_RS21910	0.77	-0.2
4,932,790	-		PFLU_RS21910	0.77	+1.3
4,932,790	-		PFLU_RS21910	0.77	+1.3
4,932,790	-		PFLU_RS21910	0.77	+0.3
4,932,790	-		PFLU_RS21910	0.77	-1.8
4,932,790	-		PFLU_RS21910	0.77	+0.5
4,932,790	-		PFLU_RS21910	0.77	+1.8
4,932,790	-		PFLU_RS21910	0.77	+0.8
4,933,062	+		PFLU_RS21910	0.89	+2.0
4,933,062	+		PFLU_RS21910	0.89	+0.2
4,933,062	+		PFLU_RS21910	0.89	+0.3
4,933,062	+		PFLU_RS21910	0.89	+0.1
4,933,062	+		PFLU_RS21910	0.89	+1.8
4,933,062	+		PFLU_RS21910	0.89	-0.3
4,933,062	+		PFLU_RS21910	0.89	+0.8
4,933,062	+		PFLU_RS21910	0.89	+0.8
4,933,062	+		PFLU_RS21910	0.89	+1.8
4,933,062	+		PFLU_RS21910	0.89	+1.4
4,933,062	+		PFLU_RS21910	0.89	+2.9
4,933,062	+		PFLU_RS21910	0.89	+1.9
4,933,062	+		PFLU_RS21910	0.89	+0.6
4,933,062	+		PFLU_RS21910	0.89	-1.2
4,933,062	+		PFLU_RS21910	0.89	+0.7
4,933,063	-		PFLU_RS21910	0.89	-3.2
4,933,063	-		PFLU_RS21910	0.89	-0.9
4,933,063	-		PFLU_RS21910	0.89	+0.5
4,933,063	-		PFLU_RS21910	0.89	+2.1
4,933,063	-		PFLU_RS21910	0.89	+0.7
4,933,063	-		PFLU_RS21910	0.89	-1.4
4,933,063	-		PFLU_RS21910	0.89	+1.1
4,933,063	-		PFLU_RS21910	0.89	+1.0
4,933,063	-		PFLU_RS21910	0.89	-1.6
4,933,063	-		PFLU_RS21910	0.89	+1.2
4,933,063	-		PFLU_RS21910	0.89	+2.3
4,933,063	-		PFLU_RS21910	0.89	+1.3
4,933,063	-		PFLU_RS21910	0.89	+0.9
4,933,065	+		PFLU_RS21910	0.89	+0.8
4,933,065	+		PFLU_RS21910	0.89	+1.4
4,933,065	+		PFLU_RS21910	0.89	-0.2
4,933,089	+				+2.2
4,933,089	+				+0.1
4,933,089	+				+0.8
4,933,114	-				-2.3
4,933,114	-				+1.7
4,933,176	+				+2.7
4,933,176	+				+2.1
4,933,176	+				+1.4
4,933,177	-				+0.9
4,933,194	-				+2.9
4,933,194	-				+0.2
4,933,211	+				-1.1
4,933,211	+				-0.6
4,933,212	-				+0.2
4,933,212	-				+1.5
4,933,212	-				+1.9
4,933,212	-				+1.0
4,933,212	-				+0.8
4,933,239	+				+0.0
4,933,256	+				+0.0
4,933,256	+				+1.9
4,933,256	+				+0.6
4,933,257	-				+2.8
4,933,257	-				-2.1
4,933,272	+				+1.9
4,933,272	+				+1.7
4,933,272	+				+0.8
4,933,273	-				-1.2
4,933,273	-				+2.1
4,933,273	-				-0.2
4,933,273	-				+0.5
4,933,273	-				+2.1
4,933,273	-				-0.4
4,933,315	-				+1.1
4,933,315	-				-1.2
4,933,315	-				+0.8
4,933,315	-				+1.8
4,933,315	-				-0.7
4,933,315	-				-0.5
4,933,315	-				-0.2
4,933,544	+		PFLU_RS21915	0.10	-1.2
4,933,544	+		PFLU_RS21915	0.10	-2.2
4,933,544	+		PFLU_RS21915	0.10	-3.2
4,933,544	+		PFLU_RS21915	0.10	-1.7
4,933,544	+		PFLU_RS21915	0.10	-1.1
4,933,544	+		PFLU_RS21915	0.10	+2.0
4,933,545	-		PFLU_RS21915	0.10	-0.9
4,933,545	-		PFLU_RS21915	0.10	+1.0
4,933,545	-		PFLU_RS21915	0.10	-1.4
4,933,545	-		PFLU_RS21915	0.10	+0.8
4,933,545	-		PFLU_RS21915	0.10	-0.4
4,933,545	-		PFLU_RS21915	0.10	-0.6
4,933,545	-		PFLU_RS21915	0.10	-1.1
4,933,545	-		PFLU_RS21915	0.10	-1.8
4,933,950	+				+0.9
4,933,962	-				+3.3
4,933,973	-				+6.8
4,933,976	+				-1.7
4,933,976	+				-0.8
4,933,976	+				+1.5
4,933,977	-				+4.9
4,933,977	-				+4.9
4,933,977	-				+4.9
4,933,980	-				+4.3
4,933,980	-				+4.5
4,933,987	+				-0.2
4,933,987	+				-1.4
4,933,987	+				-1.7
4,933,987	+				-0.2
4,933,988	-				+3.7
4,933,988	-				+4.1
4,933,988	-				+4.2
4,933,988	-				+3.3
4,934,006	+				+0.8
4,934,020	+				+1.2
4,934,020	+				+0.2
4,934,020	+				+0.6
4,934,020	+				+0.2
4,934,020	+				+1.8
4,934,020	+				-2.2
4,934,020	+				-0.7
4,934,020	+				-0.6
4,934,020	+				-1.1
4,934,020	+				+0.0
4,934,020	+				+1.9
4,934,020	+				-0.6
4,934,020	+				-1.6
4,934,020	+				+0.8
4,934,020	+				-0.8
4,934,020	+				-1.4
4,934,021	-				-0.1
4,934,021	-				+1.9
4,934,021	-				-0.6
4,934,021	-				+3.6
4,934,021	-				+1.0
4,934,021	-				-0.2
4,934,021	-				+2.1
4,934,021	-				+4.1
4,934,021	-				+2.0
4,934,021	-				+1.6
4,934,021	-				+1.7
4,934,021	-				+2.1
4,934,021	-				+0.5
4,934,021	-				-0.5
4,934,021	-				+2.5
4,934,021	-				+1.3
4,934,021	-				-0.6
4,934,021	-				+1.3
4,934,021	-				+0.5
4,934,021	-				+0.7
4,934,021	-				+1.7
4,934,021	-				+0.7
4,934,021	-				-1.9
4,934,021	-				-0.3
4,934,021	-				+2.5
4,934,021	-				+0.9
4,934,021	-				+1.9
4,934,021	-				+1.1
4,934,024	+				+4.0
4,934,024	+				-0.9
4,934,024	+				-0.6
4,934,024	+				-0.2
4,934,024	+				-0.2
4,934,024	+				-0.8
4,934,025	-				-2.6
4,934,025	-				+0.7
4,934,025	-				+1.8
4,934,025	-				-1.7
4,934,025	-				-1.1
4,934,025	-				+1.6
4,934,035	+				-0.4
4,934,035	+				-1.9
4,934,035	+				+1.8
4,934,035	+				-0.8
4,934,036	-				+3.6
4,934,036	-				+3.3
4,934,036	-				+2.6
4,934,046	-				+3.5
4,934,046	-				+4.0
4,934,057	+				+0.8
4,934,057	+				-0.8
4,934,058	-				+3.3
4,934,089	+				-0.2
4,934,089	+				-0.8
4,934,090	-				+2.8
4,934,090	-				+2.5
4,934,090	-				+2.5
4,934,096	+				-1.1
4,934,096	+				-1.2
4,934,096	+				-1.1
4,934,097	-				+2.5
4,934,097	-				+2.1
4,934,097	-				+3.3
4,934,097	-				+1.8
4,934,124	+				-1.1
4,934,125	-				+2.3
4,934,125	-				+3.3
4,934,125	-				+1.8
4,934,273	+		PFLU_RS21920	0.10	-0.2
4,934,274	-		PFLU_RS21920	0.10	-2.3
4,934,526	+		PFLU_RS21920	0.22	-2.6
4,934,526	+		PFLU_RS21920	0.22	+0.2
4,934,527	-		PFLU_RS21920	0.22	-0.6
4,934,527	-		PFLU_RS21920	0.22	+1.8
4,934,527	-		PFLU_RS21920	0.22	-0.6
4,934,531	+		PFLU_RS21920	0.22	-0.6
4,934,531	+		PFLU_RS21920	0.22	-1.0
4,934,531	+		PFLU_RS21920	0.22	-0.6
4,934,531	+		PFLU_RS21920	0.22	+0.8
4,934,531	+		PFLU_RS21920	0.22	-0.2
4,934,532	-		PFLU_RS21920	0.22	+2.5
4,934,831	+		PFLU_RS21920	0.36	+0.8
4,934,831	+		PFLU_RS21920	0.36	+1.8
4,934,832	-		PFLU_RS21920	0.36	-1.2
4,934,887	+		PFLU_RS21920	0.39	+0.8
4,934,887	+		PFLU_RS21920	0.39	-1.6
4,934,888	-		PFLU_RS21920	0.39	-0.6
4,934,888	-		PFLU_RS21920	0.39	+1.6
4,934,888	-		PFLU_RS21920	0.39	+2.1
4,934,890	+		PFLU_RS21920	0.39	-1.6
4,934,890	+		PFLU_RS21920	0.39	-1.2
4,934,890	+		PFLU_RS21920	0.39	+3.3
4,934,890	+		PFLU_RS21920	0.39	-0.7
4,934,890	+		PFLU_RS21920	0.39	+1.4
4,934,890	+		PFLU_RS21920	0.39	+0.3
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