Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29345

Experiment: D-Galactose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose (C)
6,517,836	+		PFLU_RS29340	0.58	+0.2
6,517,836	+		PFLU_RS29340	0.58	-0.1
6,517,836	+		PFLU_RS29340	0.58	+2.7
6,517,836	+		PFLU_RS29340	0.58	+0.0
6,517,837	-		PFLU_RS29340	0.58	+2.2
6,518,047	+		PFLU_RS29340	0.71	+2.8
6,518,230	+		PFLU_RS29340	0.82	-2.2
6,518,231	-		PFLU_RS29340	0.82	+3.1
6,518,243	+		PFLU_RS29340	0.83	+2.3
6,518,243	+		PFLU_RS29340	0.83	+2.3
6,518,243	+		PFLU_RS29340	0.83	+3.1
6,518,243	+		PFLU_RS29340	0.83	+2.3
6,518,243	+		PFLU_RS29340	0.83	+2.2
6,518,243	+		PFLU_RS29340	0.83	+2.6
6,518,243	+		PFLU_RS29340	0.83	+1.3
6,518,243	+		PFLU_RS29340	0.83	+1.9
6,518,244	-		PFLU_RS29340	0.83	+1.7
6,518,244	-		PFLU_RS29340	0.83	+1.1
6,518,244	-		PFLU_RS29340	0.83	-0.7
6,518,244	-		PFLU_RS29340	0.83	+1.3
6,518,244	-		PFLU_RS29340	0.83	-0.2
6,518,244	-		PFLU_RS29340	0.83	+1.3
6,518,244	-		PFLU_RS29340	0.83	+2.3
6,518,244	-		PFLU_RS29340	0.83	+2.6
6,518,244	-		PFLU_RS29340	0.83	+2.0
6,518,244	-		PFLU_RS29340	0.83	-0.0
6,518,244	-		PFLU_RS29340	0.83	+0.1
6,518,244	-		PFLU_RS29340	0.83	-0.3
6,518,468	+				+2.6
6,518,469	-				+1.8
6,518,527	+				+0.3
6,518,527	+				+3.3
6,518,527	+				+0.0
6,518,528	-				+1.3
6,518,536	+				+1.3
6,518,536	+				+2.7
6,518,536	+				+2.5
6,518,536	+				+2.3
6,518,536	+				+1.1
6,518,536	+				+2.4
6,518,536	+				+2.5
6,518,536	+				+1.1
6,518,536	+				+1.2
6,518,536	+				+2.2
6,518,536	+				+1.3
6,518,536	+				+2.7
6,518,536	+				-1.8
6,518,536	+				+2.6
6,518,536	+				+0.6
6,518,536	+				+1.3
6,518,536	+				+0.7
6,518,536	+				+2.3
6,518,536	+				-0.9
6,518,536	+				+2.6
6,518,536	+				+2.0
6,518,536	+				+2.2
6,518,537	-				+0.9
6,518,537	-				+1.8
6,518,537	-				-1.2
6,518,537	-				+1.8
6,518,537	-				+2.1
6,518,537	-				-1.9
6,518,537	-				+2.7
6,518,537	-				+1.1
6,518,537	-				+2.0
6,518,537	-				+1.2
6,518,537	-				-1.7
6,518,537	-				+2.1
6,518,537	-				+0.9
6,518,537	-				+2.1
6,518,537	-				+3.0
6,518,537	-				+0.0
6,518,537	-				+3.0
6,518,537	-				+2.0
6,518,537	-				+0.9
6,518,537	-				+1.3
6,518,537	-				+1.6
6,518,537	-				+1.9
6,518,537	-				+0.5
6,518,537	-				+1.8
6,518,537	-				-1.1
6,518,544	+				+1.7
6,518,544	+				+1.6
6,518,577	+				+0.8
6,518,577	+				+1.8
6,518,577	+				+0.3
6,518,577	+				+1.5
6,518,577	+				-1.3
6,518,578	-				-2.2
6,518,578	-				-1.3
6,518,578	-				-0.9
6,518,578	-				+1.2
6,518,578	-				+0.9
6,518,632	+				-0.0
6,518,632	+				-1.3
6,518,633	-				-1.1
6,518,633	-				+0.9
6,518,639	+				-1.5
6,518,639	+				-0.0
6,518,639	+				-1.2
6,518,639	+				+0.8
6,518,639	+				-1.0
6,518,639	+				+0.7
6,518,639	+				-0.1
6,518,639	+				+0.8
6,518,639	+				+0.4
6,518,640	-				+0.7
6,518,640	-				-3.2
6,518,640	-				-1.4
6,518,646	+				+1.1
6,518,646	+				-1.3
6,518,647	-				-0.2
6,518,673	+				+0.5
6,518,673	+				-0.2
6,518,673	+				+2.2
6,518,673	+				-0.0
6,518,673	+				+0.4
6,518,674	-				-0.8
6,518,692	-				+0.9
6,518,692	-				+0.5
6,518,703	+				-0.6
6,518,703	+				-0.1
6,518,704	-				-0.3
6,518,704	-				+0.3
6,518,704	-				-1.7
6,518,704	-				+0.9
6,518,748	+				+1.1
6,518,748	+				-0.6
6,518,748	+				+0.1
6,518,770	-				-0.1
6,518,789	+				-0.5
6,518,789	+				+0.9
6,518,789	+				+2.1
6,518,789	+				+1.1
6,518,789	+				+1.1
6,518,789	+				+0.8
6,518,789	+				+0.2
6,518,789	+				+1.7
6,518,789	+				-2.1
6,520,789	+				-1.9
6,520,789	+				-0.4
6,520,789	+				-0.1
6,520,789	+				-0.3
6,520,789	+				-0.8
6,520,789	+				+0.7
6,520,789	+				+0.1
6,520,798	-				+0.8
6,520,808	-				-0.8
6,520,814	+				+1.6
6,520,814	+				+0.2
6,520,819	+				-0.1
6,520,819	+				-2.6
6,520,820	-				-1.1
6,520,843	+				-1.8
6,520,843	+				+0.1
6,520,843	+				-1.3
6,520,843	+				-0.3
6,520,843	+				-0.3
6,520,844	-				-1.5
6,520,844	-				+0.0
6,520,873	-				+0.7
6,520,873	-				+0.7
6,520,913	+				-0.2
6,520,914	-				-0.6
6,520,914	-				+0.3
6,520,914	-				-0.3
6,520,914	-				+0.1
6,520,914	-				+0.2
6,521,146	+		PFLU_RS29350	0.50	+0.3
6,521,146	+		PFLU_RS29350	0.50	-0.3
6,521,146	+		PFLU_RS29350	0.50	-1.9
6,521,146	+		PFLU_RS29350	0.50	-0.2
6,521,146	+		PFLU_RS29350	0.50	+1.2
6,521,146	+		PFLU_RS29350	0.50	-0.6
6,521,146	+		PFLU_RS29350	0.50	+0.3
6,521,146	+		PFLU_RS29350	0.50	-0.2
6,521,146	+		PFLU_RS29350	0.50	+0.2
6,521,146	+		PFLU_RS29350	0.50	-1.3
6,521,146	+		PFLU_RS29350	0.50	-0.4
6,521,146	+		PFLU_RS29350	0.50	-0.3
6,521,147	-		PFLU_RS29350	0.50	+0.7
6,521,147	-		PFLU_RS29350	0.50	-0.0
6,521,147	-		PFLU_RS29350	0.50	+0.1
6,521,147	-		PFLU_RS29350	0.50	-0.6
6,521,147	-		PFLU_RS29350	0.50	-1.2
6,521,147	-		PFLU_RS29350	0.50	-0.3
6,521,147	-		PFLU_RS29350	0.50	+0.5
6,521,428	+				+0.7
6,521,428	+				-0.7
6,521,429	-				-0.8
6,521,429	-				-0.7
6,521,445	+				+0.3
6,521,445	+				+0.4
6,521,445	+				-0.8
6,521,446	-				+0.4
6,521,446	-				+1.9
6,521,446	-				+0.9
6,521,446	-				+1.0
6,521,446	-				-0.9
6,521,446	-				-0.9
6,521,446	-				+0.0
6,521,446	-				+0.1
6,521,446	-				-1.5
6,521,464	+				-0.4
6,521,501	+				-0.3
6,521,501	+				+0.3
6,521,501	+				+0.5
6,521,501	+				-0.0
6,521,501	+				-0.4
6,521,501	+				+0.7
6,521,501	+				+0.0
6,521,501	+				+2.2
6,521,502	-				-3.1
6,521,502	-				-1.8
6,521,502	-				-0.1
6,521,502	-				+0.4
6,521,502	-				-0.9
6,521,502	-				+1.3
6,521,502	-				+0.1
6,521,502	-				+1.5
6,521,502	-				+0.5
6,521,502	-				+0.9
6,521,502	-				-0.4
6,521,580	+				-0.2
6,521,580	+				-0.6
6,521,580	+				-0.8
6,521,580	+				-1.6
6,521,580	+				+0.2
6,521,581	-				-0.1
6,521,581	-				+1.9
6,521,581	-				+1.9
6,521,622	+				+0.3
6,521,622	+				+0.1
6,521,623	-				+1.4
6,521,623	-				+1.3
6,521,623	-				+0.5
6,521,623	-				+0.1
6,521,624	+				-1.2
6,521,624	+				+0.2
6,521,624	+				-0.2
6,521,624	+				-0.8
6,521,624	+				-1.2
6,521,624	+				-0.4
6,521,624	+				-0.7
6,521,624	+				-1.0
6,521,624	+				+1.6
6,521,624	+				+1.3
6,521,625	-				+0.7
6,521,625	-				-1.8
6,521,625	-				+0.7
6,521,625	-				-1.8
6,521,625	-				-0.7
6,521,625	-				-0.7
6,521,625	-				-0.4
6,521,625	-				+1.8
6,521,625	-				-0.5
6,521,625	-				+0.0
6,521,625	-				+0.6